Click here to switch to the map view.

The map label for this gene is 45657817

Identifier: 45657817

GI number: 45657817

Start: 2365179

End: 2366387

Strand: Direct

Name: 45657817

Synonym: LIC11958

Alternate gene names: NA

Gene position: 2365179-2366387 (Clockwise)

Preceding gene: 45657816

Following gene: 45657818

Centisome position: 55.3

GC content: 37.88

Gene sequence:

>1209_bases
GTGAAACATATTCTTTTTTTTGCATATATCCTCTTTTTATTTTTTACGCAAATTTCTGTATTTGCTCAATTAAAATCGGC
TAAACTTTCCGAAGAACAAATTCTAAAGAAAAAAGAAGTTCTTCTACAAGTTTTAAAATTCGGAACTACAAAAGAAAGGG
CCATGGCGCTTCGAGAACTTGAAGGGTTTCCGCCCGAACATTCTGGAATTCTAATAGACCAACTCGGTAAAATTTTAGAT
AAGGACCCAGATTGGATGATGAGGGTCTATACAATTAGAACCGTTGCCACATTAAAACTTACTCAATATGAAGAATCCAT
CCTTAAACTTCTAAAAAACGAACAACCGGATATACAAAAGGAATCCATCTACGCCACTAAAAAATTAAAATTCGAGAAAG
CAGTTCCGATTCTTTTTGAGATACTAAAAACACAGGACTTTACTAAAAATTCTAATCTTACCGTAGGACTTTTAGACGCG
TTAGGCGATTTTCCTCCTCAAGAAGAATCTTCTGCTTTCTTACTCGCTCGATTGCATGAAAACTTCAACGATCCGGAAAT
CAGAGCCCAAATCGCTCTTTTTTTTGGAAAGAACAAGGATAAAAGAGCGGAGAGCACATTACTCGAAATCTATAAGGACT
CTAAAGAACCAATCACTCTTAGAAGTTTTTCCGTTAGTTCTCTTGGTAAAATGAAATCCATTTCCTCAATGCAGACAATC
AAGGAGGAATTGGAAAAAATTAGAAATCTCAAAAATAAACAAGAAGTTAAAGACTTTCAACCTCTAAAAATCCATTCCAT
TACGGCACTCGTTTCTATGGGCGACAAAGATATATTAGAAGAATTGTATGCATATGCAAGAGACGATGATCCCGTCGTAA
GACTTAGAGCGATCAAACATCTTACCGATACGGGAGATATGTCCGTTCTTGAAATTTTAGAGTATAAGGCTCAGAAAGAT
CCGAGCGAAAAGGTTAAAAAAGCCGCAAAAGCAGCGATCGAAAAATTAAAAAAAGGAGAATCCGTAAGAGATTCGGACGA
CTCACTTCCTATCAAACAACCCAAGTCAGGGCATAGAGAAAAACCAATTCGCTCGAGTGATCCCTCTCCATTACCCGGCA
CTTCCAGTCCTGATCTAAGACCTTCAGGAGGAGAAAGTGGGTCTCCTCCATCCGGAGGCAAACCCGAATCCGAAGATTTA
GAGGATTAA

Upstream 100 bases:

>100_bases
GAGAATCAACATTTAATCAATGAACTCAGTAGAAAAATCCAAGAGCTGGAAGAACAAAATCAAAAATCTCAGCAAGAAAT
CTAAAAAAAAACTTAACTTT

Downstream 100 bases:

>100_bases
CTTATTGTTACGCTTTTTAAATATTCAAAAAATATTATGGATTAACTTTCTTTTTTTATATATTTCGAGTCTATCCGTAT
TTGCTCAGGAAATACATAGG

Product: ARM repeat-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MKHILFFAYILFLFFTQISVFAQLKSAKLSEEQILKKKEVLLQVLKFGTTKERAMALRELEGFPPEHSGILIDQLGKILD
KDPDWMMRVYTIRTVATLKLTQYEESILKLLKNEQPDIQKESIYATKKLKFEKAVPILFEILKTQDFTKNSNLTVGLLDA
LGDFPPQEESSAFLLARLHENFNDPEIRAQIALFFGKNKDKRAESTLLEIYKDSKEPITLRSFSVSSLGKMKSISSMQTI
KEELEKIRNLKNKQEVKDFQPLKIHSITALVSMGDKDILEELYAYARDDDPVVRLRAIKHLTDTGDMSVLEILEYKAQKD
PSEKVKKAAKAAIEKLKKGESVRDSDDSLPIKQPKSGHREKPIRSSDPSPLPGTSSPDLRPSGGESGSPPSGGKPESEDL
ED

Sequences:

>Translated_402_residues
MKHILFFAYILFLFFTQISVFAQLKSAKLSEEQILKKKEVLLQVLKFGTTKERAMALRELEGFPPEHSGILIDQLGKILD
KDPDWMMRVYTIRTVATLKLTQYEESILKLLKNEQPDIQKESIYATKKLKFEKAVPILFEILKTQDFTKNSNLTVGLLDA
LGDFPPQEESSAFLLARLHENFNDPEIRAQIALFFGKNKDKRAESTLLEIYKDSKEPITLRSFSVSSLGKMKSISSMQTI
KEELEKIRNLKNKQEVKDFQPLKIHSITALVSMGDKDILEELYAYARDDDPVVRLRAIKHLTDTGDMSVLEILEYKAQKD
PSEKVKKAAKAAIEKLKKGESVRDSDDSLPIKQPKSGHREKPIRSSDPSPLPGTSSPDLRPSGGESGSPPSGGKPESEDL
ED
>Mature_402_residues
MKHILFFAYILFLFFTQISVFAQLKSAKLSEEQILKKKEVLLQVLKFGTTKERAMALRELEGFPPEHSGILIDQLGKILD
KDPDWMMRVYTIRTVATLKLTQYEESILKLLKNEQPDIQKESIYATKKLKFEKAVPILFEILKTQDFTKNSNLTVGLLDA
LGDFPPQEESSAFLLARLHENFNDPEIRAQIALFFGKNKDKRAESTLLEIYKDSKEPITLRSFSVSSLGKMKSISSMQTI
KEELEKIRNLKNKQEVKDFQPLKIHSITALVSMGDKDILEELYAYARDDDPVVRLRAIKHLTDTGDMSVLEILEYKAQKD
PSEKVKKAAKAAIEKLKKGESVRDSDDSLPIKQPKSGHREKPIRSSDPSPLPGTSSPDLRPSGGESGSPPSGGKPESEDL
ED

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45452; Mature: 45452

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHILFFAYILFLFFTQISVFAQLKSAKLSEEQILKKKEVLLQVLKFGTTKERAMALREL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EGFPPEHSGILIDQLGKILDKDPDWMMRVYTIRTVATLKLTQYEESILKLLKNEQPDIQK
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
ESIYATKKLKFEKAVPILFEILKTQDFTKNSNLTVGLLDALGDFPPQEESSAFLLARLHE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHCCCCCCCCCHHHHHHHHHC
NFNDPEIRAQIALFFGKNKDKRAESTLLEIYKDSKEPITLRSFSVSSLGKMKSISSMQTI
CCCCCHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHH
KEELEKIRNLKNKQEVKDFQPLKIHSITALVSMGDKDILEELYAYARDDDPVVRLRAIKH
HHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
LTDTGDMSVLEILEYKAQKDPSEKVKKAAKAAIEKLKKGESVRDSDDSLPIKQPKSGHRE
HCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
KPIRSSDPSPLPGTSSPDLRPSGGESGSPPSGGKPESEDLED
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKHILFFAYILFLFFTQISVFAQLKSAKLSEEQILKKKEVLLQVLKFGTTKERAMALREL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EGFPPEHSGILIDQLGKILDKDPDWMMRVYTIRTVATLKLTQYEESILKLLKNEQPDIQK
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
ESIYATKKLKFEKAVPILFEILKTQDFTKNSNLTVGLLDALGDFPPQEESSAFLLARLHE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHCCCCCCCCCHHHHHHHHHC
NFNDPEIRAQIALFFGKNKDKRAESTLLEIYKDSKEPITLRSFSVSSLGKMKSISSMQTI
CCCCCHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHH
KEELEKIRNLKNKQEVKDFQPLKIHSITALVSMGDKDILEELYAYARDDDPVVRLRAIKH
HHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
LTDTGDMSVLEILEYKAQKDPSEKVKKAAKAAIEKLKKGESVRDSDDSLPIKQPKSGHRE
HCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
KPIRSSDPSPLPGTSSPDLRPSGGESGSPPSGGKPESEDLED
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA