| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is 45657815
Identifier: 45657815
GI number: 45657815
Start: 2363671
End: 2364603
Strand: Direct
Name: 45657815
Synonym: LIC11956
Alternate gene names: NA
Gene position: 2363671-2364603 (Clockwise)
Preceding gene: 45657814
Following gene: 45657816
Centisome position: 55.26
GC content: 34.62
Gene sequence:
>933_bases TTGAGTTTTTTGGATTCACTCAAACAAAATTCTCAAAATAAAATCGCCAAAGAATATTTTCAAAAAATCTGGATACGTAA CTGTGTCCGAAACCTTACGAGTTTATTCCAAAATTCGAATACTTCTCTGATTTTTTCCGGAGCCAAAAACAATTTCTTTC AAAACCAAACCTTAGTTTTTACAGGCGCGAGTCCTACTCTCGAAAAAGAAACGGACTGGATTTCTAAAAACAGAAACCAA TTTCATCTACTCGCTTCGGACACTTCTTTGGGTTGGATTTTAAATTTCGGAATCGTTCCTGACGCGGTTTTGAGTATAGA TTCTTCCAGAGGTACGTTATTTCACTTTCGAAATATTCTTCCCAAAGAAATTCCAATCCTTACTTGGTTTGGCGGTTGTA CTTATCTTTTTGATCTTCCAAATCCAAAATGGATTTATTTTTCCACTCATCCTTTAGATCAAGTTTTAAGATCTCTTTTT TTTCAGAATGCGCCTATCTTGGAAAATCCGTCTTTAAACATGGCGGGAATCGCCGTGTCCTTCGCCAAACATCTTAAATA CGATAGGTTAATTTTAAAAGGTGTAGATTTTCATAGAAGCAATGGTAAAACTCATTGTAGATCCAGTGGTTACGAAGTTT ATGATCGCTTTTTTCTTTCCAGAAAAGTAAGTCTGTTTAAGACGCGGTTTCAAAAATCAAAGTCGTGGGAAAAAAGATTT TCCATTTTAGAAATATTAAAAGAAGAATCTCCGGAACTTTTCCAATCCAATCCTATGTCTAAAATCACAAAAAAACTCGG AGAAGGTTTGATCTTAGAAGATCCAAAAAAGATTCAGTTCGAAAAATGGATTCAATTTTGCGTTGCACATTTGGATCTAA AAGGTTATTTTTCCTCTCGGATTTTGAATATTCCTTCGGTAATCAAACCCTAA
Upstream 100 bases:
>100_bases ATTTTTATCTCACCCACTCTCTTTCTGGCTTTCCGAAAAAACAAACCAAGTCTCCCCTTTTTTACATCCCGTTTATTCTA GAAAATTTTCCGATCTAACA
Downstream 100 bases:
>100_bases GTAAATCTTAAAGATATACTCTTGACGCAATTCTATTTCTAAAGATACTTTCCGATTTGGGACAAAGATTATGAATAAAG GTTATATCATTTGTGTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSFLDSLKQNSQNKIAKEYFQKIWIRNCVRNLTSLFQNSNTSLIFSGAKNNFFQNQTLVFTGASPTLEKETDWISKNRNQ FHLLASDTSLGWILNFGIVPDAVLSIDSSRGTLFHFRNILPKEIPILTWFGGCTYLFDLPNPKWIYFSTHPLDQVLRSLF FQNAPILENPSLNMAGIAVSFAKHLKYDRLILKGVDFHRSNGKTHCRSSGYEVYDRFFLSRKVSLFKTRFQKSKSWEKRF SILEILKEESPELFQSNPMSKITKKLGEGLILEDPKKIQFEKWIQFCVAHLDLKGYFSSRILNIPSVIKP
Sequences:
>Translated_310_residues MSFLDSLKQNSQNKIAKEYFQKIWIRNCVRNLTSLFQNSNTSLIFSGAKNNFFQNQTLVFTGASPTLEKETDWISKNRNQ FHLLASDTSLGWILNFGIVPDAVLSIDSSRGTLFHFRNILPKEIPILTWFGGCTYLFDLPNPKWIYFSTHPLDQVLRSLF FQNAPILENPSLNMAGIAVSFAKHLKYDRLILKGVDFHRSNGKTHCRSSGYEVYDRFFLSRKVSLFKTRFQKSKSWEKRF SILEILKEESPELFQSNPMSKITKKLGEGLILEDPKKIQFEKWIQFCVAHLDLKGYFSSRILNIPSVIKP >Mature_309_residues SFLDSLKQNSQNKIAKEYFQKIWIRNCVRNLTSLFQNSNTSLIFSGAKNNFFQNQTLVFTGASPTLEKETDWISKNRNQF HLLASDTSLGWILNFGIVPDAVLSIDSSRGTLFHFRNILPKEIPILTWFGGCTYLFDLPNPKWIYFSTHPLDQVLRSLFF QNAPILENPSLNMAGIAVSFAKHLKYDRLILKGVDFHRSNGKTHCRSSGYEVYDRFFLSRKVSLFKTRFQKSKSWEKRFS ILEILKEESPELFQSNPMSKITKKLGEGLILEDPKKIQFEKWIQFCVAHLDLKGYFSSRILNIPSVIKP
Specific function: Unknown
COG id: COG2604
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35939; Mature: 35808
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLDSLKQNSQNKIAKEYFQKIWIRNCVRNLTSLFQNSNTSLIFSGAKNNFFQNQTLVF CCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEE TGASPTLEKETDWISKNRNQFHLLASDTSLGWILNFGIVPDAVLSIDSSRGTLFHFRNIL ECCCCCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCCCHHHHEECCCCCHHHHHHHCC PKEIPILTWFGGCTYLFDLPNPKWIYFSTHPLDQVLRSLFFQNAPILENPSLNMAGIAVS CCCCCEEEEECCEEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH FAKHLKYDRLILKGVDFHRSNGKTHCRSSGYEVYDRFFLSRKVSLFKTRFQKSKSWEKRF HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SILEILKEESPELFQSNPMSKITKKLGEGLILEDPKKIQFEKWIQFCVAHLDLKGYFSSR HHHHHHHHCCCHHHHCCCHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHH ILNIPSVIKP HCCCCHHCCC >Mature Secondary Structure SFLDSLKQNSQNKIAKEYFQKIWIRNCVRNLTSLFQNSNTSLIFSGAKNNFFQNQTLVF CHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEE TGASPTLEKETDWISKNRNQFHLLASDTSLGWILNFGIVPDAVLSIDSSRGTLFHFRNIL ECCCCCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCCCHHHHEECCCCCHHHHHHHCC PKEIPILTWFGGCTYLFDLPNPKWIYFSTHPLDQVLRSLFFQNAPILENPSLNMAGIAVS CCCCCEEEEECCEEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH FAKHLKYDRLILKGVDFHRSNGKTHCRSSGYEVYDRFFLSRKVSLFKTRFQKSKSWEKRF HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SILEILKEESPELFQSNPMSKITKKLGEGLILEDPKKIQFEKWIQFCVAHLDLKGYFSSR HHHHHHHHCCCHHHHCCCHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHH ILNIPSVIKP HCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA