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The map label for this gene is 45657780

Identifier: 45657780

GI number: 45657780

Start: 2317742

End: 2318911

Strand: Direct

Name: 45657780

Synonym: LIC11920

Alternate gene names: NA

Gene position: 2317742-2318911 (Clockwise)

Preceding gene: 45657776

Following gene: 45657782

Centisome position: 54.19

GC content: 35.21

Gene sequence:

>1170_bases
ATGGAAACAATTCAGAGAAAAAAAAGAGAGAAGGAAACGATCTCGGACCCTACTAAAAAGTTTCATATTATTTCTAAATT
TCTAGTACAAACAGATATTATAGCCCAAACTTCCAATTCCTTAAAACAAATCGTCAAAATTCTTCAAGTTTCTAAAGACG
CCACAAAAATACTGGTTCAAACACAAACGCCTAACGCACTTCCGTTAAACTCTCATGTTACCCTCGCAAAACTATTGGCA
AAATATGTAGAACTCAGTTGTGAGGTTATCGATGAAAAACCTAACAATCAATTTATTCTTTCCGTTTCGGAAATTTCGAT
CGCGAGCAAAGAAAGAAGTCTCAACCGAATCGTACCTCCAGAAGGAACCGTTTGGATTACGAATATCCGTACTAGCAAAA
CTACAATCGACGCAAACTTATTTAACATCCCCACTTCCGTAAAAGTAAATTTTGCAGACTACGAAACAAAGCTGAAGTCA
AAATACGATTTTCTAAAAGTAGACGTATTTGGAACGATCGGAGATAAATTCGATCTGGTAAAAAAAACTCGTAAGATTCT
TTATATTTCAAATACTCAAAAAGAACAAAGTTATGCGGCATACAATCAAGAGGACTTTATAGACTACGCCGCAGAGTTGG
GAGATGAAGAAGACGTTCATAAAAGAATCATTGAATATGCGAATCAAAAAATAAAATCAGAGCTAATCGTTCCTGTAATT
TACTTAAGTCATGAAGAGCAAGCAATCCCGATCGGATTTGTACACGCTCAAAACCGTAGCAGAGAAATTGATATTTTAGA
AGTAATGGAAATCAAAACTCTTACTTTCGAAATGGTAGATCGAATTCGCGAGTCAAACACCATTCTTGTAAAAGAAAGAT
TCCCAATCGTAAATATTTCTACGGGAGGTTTGAAAGTGAAAATCAATCATCCAGATTTAAATCAAGACTTTATCAAAAGA
GCCGGATTTACATTTGATATTTTTTTCAAAATGCAAGCACCACTTACAGCGTTTGGAGTCATTCGTTCGGTCACTAAAGA
TACAGAAGGAAACTTATACGTTGGTCTTTCTATCGAAGGAAACTCTTATAGGCCGGGAGAAAGAAAGAAATATATAGATA
ACGTCAATAGACTTCTTGTAGAAGCTAACCCAATTCAAAGCCAATTTTGA

Upstream 100 bases:

>100_bases
TTCGGAGTCGCGGTAAGTTTGGTTTGACATTACCTAGTACATAAAAGGTAAACTGAGAACTAAGATCAAGAGAATTTCCC
CTCGTTCGCTTTGAAAAACT

Downstream 100 bases:

>100_bases
ACTCAAACGTTATCCTGAAATTTCAAATACTCATTCCTACAAAATTAAATATTAGAGTTGTTGAAAAATTAATTCTCCAT
CTACTTCCGTTACATTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
METIQRKKREKETISDPTKKFHIISKFLVQTDIIAQTSNSLKQIVKILQVSKDATKILVQTQTPNALPLNSHVTLAKLLA
KYVELSCEVIDEKPNNQFILSVSEISIASKERSLNRIVPPEGTVWITNIRTSKTTIDANLFNIPTSVKVNFADYETKLKS
KYDFLKVDVFGTIGDKFDLVKKTRKILYISNTQKEQSYAAYNQEDFIDYAAELGDEEDVHKRIIEYANQKIKSELIVPVI
YLSHEEQAIPIGFVHAQNRSREIDILEVMEIKTLTFEMVDRIRESNTILVKERFPIVNISTGGLKVKINHPDLNQDFIKR
AGFTFDIFFKMQAPLTAFGVIRSVTKDTEGNLYVGLSIEGNSYRPGERKKYIDNVNRLLVEANPIQSQF

Sequences:

>Translated_389_residues
METIQRKKREKETISDPTKKFHIISKFLVQTDIIAQTSNSLKQIVKILQVSKDATKILVQTQTPNALPLNSHVTLAKLLA
KYVELSCEVIDEKPNNQFILSVSEISIASKERSLNRIVPPEGTVWITNIRTSKTTIDANLFNIPTSVKVNFADYETKLKS
KYDFLKVDVFGTIGDKFDLVKKTRKILYISNTQKEQSYAAYNQEDFIDYAAELGDEEDVHKRIIEYANQKIKSELIVPVI
YLSHEEQAIPIGFVHAQNRSREIDILEVMEIKTLTFEMVDRIRESNTILVKERFPIVNISTGGLKVKINHPDLNQDFIKR
AGFTFDIFFKMQAPLTAFGVIRSVTKDTEGNLYVGLSIEGNSYRPGERKKYIDNVNRLLVEANPIQSQF
>Mature_389_residues
METIQRKKREKETISDPTKKFHIISKFLVQTDIIAQTSNSLKQIVKILQVSKDATKILVQTQTPNALPLNSHVTLAKLLA
KYVELSCEVIDEKPNNQFILSVSEISIASKERSLNRIVPPEGTVWITNIRTSKTTIDANLFNIPTSVKVNFADYETKLKS
KYDFLKVDVFGTIGDKFDLVKKTRKILYISNTQKEQSYAAYNQEDFIDYAAELGDEEDVHKRIIEYANQKIKSELIVPVI
YLSHEEQAIPIGFVHAQNRSREIDILEVMEIKTLTFEMVDRIRESNTILVKERFPIVNISTGGLKVKINHPDLNQDFIKR
AGFTFDIFFKMQAPLTAFGVIRSVTKDTEGNLYVGLSIEGNSYRPGERKKYIDNVNRLLVEANPIQSQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44481; Mature: 44481

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METIQRKKREKETISDPTKKFHIISKFLVQTDIIAQTSNSLKQIVKILQVSKDATKILVQ
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
TQTPNALPLNSHVTLAKLLAKYVELSCEVIDEKPNNQFILSVSEISIASKERSLNRIVPP
ECCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCEEEEEEHHEEHHHHHCCCCCCCCC
EGTVWITNIRTSKTTIDANLFNIPTSVKVNFADYETKLKSKYDFLKVDVFGTIGDKFDLV
CCCEEEEEEECCCEEEECEEEECCCEEEEEEHHHHHHHHCCCCEEEEEEEECCCCHHHHH
KKTRKILYISNTQKEQSYAAYNQEDFIDYAAELGDEEDVHKRIIEYANQKIKSELIVPVI
HHCCEEEEEECCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEEEE
YLSHEEQAIPIGFVHAQNRSREIDILEVMEIKTLTFEMVDRIRESNTILVKERFPIVNIS
EECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEE
TGGLKVKINHPDLNQDFIKRAGFTFDIFFKMQAPLTAFGVIRSVTKDTEGNLYVGLSIEG
CCCEEEEEECCCCCHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEEEC
NSYRPGERKKYIDNVNRLLVEANPIQSQF
CCCCCCHHHHHHHHHHEEEEECCCCCCCC
>Mature Secondary Structure
METIQRKKREKETISDPTKKFHIISKFLVQTDIIAQTSNSLKQIVKILQVSKDATKILVQ
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
TQTPNALPLNSHVTLAKLLAKYVELSCEVIDEKPNNQFILSVSEISIASKERSLNRIVPP
ECCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCEEEEEEHHEEHHHHHCCCCCCCCC
EGTVWITNIRTSKTTIDANLFNIPTSVKVNFADYETKLKSKYDFLKVDVFGTIGDKFDLV
CCCEEEEEEECCCEEEECEEEECCCEEEEEEHHHHHHHHCCCCEEEEEEEECCCCHHHHH
KKTRKILYISNTQKEQSYAAYNQEDFIDYAAELGDEEDVHKRIIEYANQKIKSELIVPVI
HHCCEEEEEECCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEEEE
YLSHEEQAIPIGFVHAQNRSREIDILEVMEIKTLTFEMVDRIRESNTILVKERFPIVNIS
EECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEE
TGGLKVKINHPDLNQDFIKRAGFTFDIFFKMQAPLTAFGVIRSVTKDTEGNLYVGLSIEG
CCCEEEEEECCCCCHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEEEC
NSYRPGERKKYIDNVNRLLVEANPIQSQF
CCCCCCHHHHHHHHHHEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA