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The map label for this gene is 45657662

Identifier: 45657662

GI number: 45657662

Start: 2189530

End: 2190510

Strand: Direct

Name: 45657662

Synonym: LIC11796

Alternate gene names: NA

Gene position: 2189530-2190510 (Clockwise)

Preceding gene: 45657661

Following gene: 45657663

Centisome position: 51.19

GC content: 32.93

Gene sequence:

>981_bases
ATGAATTTGAAAGATTATATCAAAAGCTACTTCCAAAGAGTCGGCTGGATTCCACCTATTATAAATTTGGTCTGTTTTAT
CGCCCCAATCGTATTTCTACAAAACTCTTCGTTTTCGGAAAAAGAAAAAATTCTACTTTATTTAGGTATCATTGGTTTTA
TTTATTTAGTAAATTATATTTCTTTTATATTCTTTCTCACAAAAAAAATCCTTCCAGAGGAAGAAATACGTTCAAAGATG
AGAAAACGTTATCGAAAGGGCGACGACCGAATGCAGAGTTATCTTTTTCCCCTACCTTTAGATGACGAAAACTACGAAAT
CTACGGAAGAACTCTCACATATAATCCAATCGGAGGCGATTTTTATAACTTTTTAACGGATCCTCAAGGAAATTATTGGA
TCGGTATAGGAGACTCTGTGGGACACGGCTATCTCGCCGGAATTTTTAGTATGATGATTTTTCAAAACATGTCCTTACTC
GTAAAACACAACTTAAGTCCTTACGAAGTTATAGAACAAATCAACGAAGACCTTTTAAAAAGAACGGAACAAAACCCTAA
AATTAATCCAAATCTATATGCAACTTTCCTTTTAATCAAAATAGACAAGGAAGGAAACTTGGAACATTCAGGTCTTCACC
CTAGTTTTGTAATCCATCAAAAAAAAACGAGAAAAAACAAAATCATAGAAACCGATGGAAAATTTGTATCGATTACCATG
AATTCTACTTTAAAAAATGTACAAGGCAAAAGTAAATTTCAATTGGAAACAGGGGATATAGTATTTTGCTTTACAGACGG
ACTCTACGAACAAAAAAATAATGGAAATCTATATTTTGGTGAAAGCCTATTTCAATTTTTAGATGAGATTCCCAAAAACG
ATCTTACTAAAATTGCAGATGTACTTTTCACCGAAATCCTAAAACATACGGGTGGAAAACTTCAGGACGATATGACGATT
CTGATGATTCGCAAAAAATGA

Upstream 100 bases:

>100_bases
ACGGAATCCACGAACCCTATTTGGAAGATCAGTATTTTCAAATTTCGAGAAAAAATTTTCTTAAGAAAGAGTTTCAGTTT
CACGCCTATTTTTATCAACC

Downstream 100 bases:

>100_bases
TTATGTTAGAATTGAGCGAGCTTGAACTTAAAATCCTAAATCTAATCCCTCTAGAAGAAAGAGATGTTCGTAAACTGGGC
AGAATTCTTCAGGACGTTTC

Product: sigma factor regulatory protein

Products: NA

Alternate protein names: Response Regulator Receiver Modulated Serine Phosphatase; Protein Serine/Threonine Phosphatase; Stage II Sporulation Protein E; GAF Sensor-Containing Protein Serine Phosphatase; Sigma Factor PP2C-Like Phosphatase; Stage II Sporulation E Family Protein; Two-Component Response Regulator; Regulator; Sigma Factor Regulatory Protein; Regulatory Protein; Sigma Factor SigB Regulation Protein; Ammonium Transporter; LacI Family Transcriptional Regulator; Serine Phosphatase RsbU Regulator Of Sigma Subunit; PAS/PAC Sensor Protein

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MNLKDYIKSYFQRVGWIPPIINLVCFIAPIVFLQNSSFSEKEKILLYLGIIGFIYLVNYISFIFFLTKKILPEEEIRSKM
RKRYRKGDDRMQSYLFPLPLDDENYEIYGRTLTYNPIGGDFYNFLTDPQGNYWIGIGDSVGHGYLAGIFSMMIFQNMSLL
VKHNLSPYEVIEQINEDLLKRTEQNPKINPNLYATFLLIKIDKEGNLEHSGLHPSFVIHQKKTRKNKIIETDGKFVSITM
NSTLKNVQGKSKFQLETGDIVFCFTDGLYEQKNNGNLYFGESLFQFLDEIPKNDLTKIADVLFTEILKHTGGKLQDDMTI
LMIRKK

Sequences:

>Translated_326_residues
MNLKDYIKSYFQRVGWIPPIINLVCFIAPIVFLQNSSFSEKEKILLYLGIIGFIYLVNYISFIFFLTKKILPEEEIRSKM
RKRYRKGDDRMQSYLFPLPLDDENYEIYGRTLTYNPIGGDFYNFLTDPQGNYWIGIGDSVGHGYLAGIFSMMIFQNMSLL
VKHNLSPYEVIEQINEDLLKRTEQNPKINPNLYATFLLIKIDKEGNLEHSGLHPSFVIHQKKTRKNKIIETDGKFVSITM
NSTLKNVQGKSKFQLETGDIVFCFTDGLYEQKNNGNLYFGESLFQFLDEIPKNDLTKIADVLFTEILKHTGGKLQDDMTI
LMIRKK
>Mature_326_residues
MNLKDYIKSYFQRVGWIPPIINLVCFIAPIVFLQNSSFSEKEKILLYLGIIGFIYLVNYISFIFFLTKKILPEEEIRSKM
RKRYRKGDDRMQSYLFPLPLDDENYEIYGRTLTYNPIGGDFYNFLTDPQGNYWIGIGDSVGHGYLAGIFSMMIFQNMSLL
VKHNLSPYEVIEQINEDLLKRTEQNPKINPNLYATFLLIKIDKEGNLEHSGLHPSFVIHQKKTRKNKIIETDGKFVSITM
NSTLKNVQGKSKFQLETGDIVFCFTDGLYEQKNNGNLYFGESLFQFLDEIPKNDLTKIADVLFTEILKHTGGKLQDDMTI
LMIRKK

Specific function: Unknown

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37921; Mature: 37921

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKDYIKSYFQRVGWIPPIINLVCFIAPIVFLQNSSFSEKEKILLYLGIIGFIYLVNYI
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
SFIFFLTKKILPEEEIRSKMRKRYRKGDDRMQSYLFPLPLDDENYEIYGRTLTYNPIGGD
HHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCH
FYNFLTDPQGNYWIGIGDSVGHGYLAGIFSMMIFQNMSLLVKHNLSPYEVIEQINEDLLK
HHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHH
RTEQNPKINPNLYATFLLIKIDKEGNLEHSGLHPSFVIHQKKTRKNKIIETDGKFVSITM
HCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEECCHHHCCCEEECCCCEEEEEE
NSTLKNVQGKSKFQLETGDIVFCFTDGLYEQKNNGNLYFGESLFQFLDEIPKNDLTKIAD
CCHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHH
VLFTEILKHTGGKLQDDMTILMIRKK
HHHHHHHHHCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MNLKDYIKSYFQRVGWIPPIINLVCFIAPIVFLQNSSFSEKEKILLYLGIIGFIYLVNYI
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
SFIFFLTKKILPEEEIRSKMRKRYRKGDDRMQSYLFPLPLDDENYEIYGRTLTYNPIGGD
HHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCH
FYNFLTDPQGNYWIGIGDSVGHGYLAGIFSMMIFQNMSLLVKHNLSPYEVIEQINEDLLK
HHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHH
RTEQNPKINPNLYATFLLIKIDKEGNLEHSGLHPSFVIHQKKTRKNKIIETDGKFVSITM
HCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEECCHHHCCCEEECCCCEEEEEE
NSTLKNVQGKSKFQLETGDIVFCFTDGLYEQKNNGNLYFGESLFQFLDEIPKNDLTKIAD
CCHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHH
VLFTEILKHTGGKLQDDMTILMIRKK
HHHHHHHHHCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA