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The map label for this gene is yfiH [C]

Identifier: 45657636

GI number: 45657636

Start: 2162006

End: 2162551

Strand: Reverse

Name: yfiH [C]

Synonym: LIC11770

Alternate gene names: 45657636

Gene position: 2162551-2162006 (Counterclockwise)

Preceding gene: 45657637

Following gene: 45657631

Centisome position: 50.56

GC content: 34.8

Gene sequence:

>546_bases
TTGAATCAGGTTCACGGTGACGGAGTTGTTGATCTGAGAACTTCCAAGAATCTTTCTTTTCCGGAAGGAGATGCGTGGAT
CGGAGAAGAGTTGAATCAAATTTTATGTATTAAAACTGCGGATTGTATGCCTTTATTTTTTTGGTCTACTCAAAGCCCTA
AGTTTGTAGCAATTCATTCCGGTTGGAAAGGAACCTTGGCTGGAATTACAGAAAAAACTTTAAAACGTTCCTTTTCAGAT
TCTATTTTAAAAGAAGGTTCACTTGTAGGTTATCTAGGACCTTATGCAAGTGGTCTAAGATATGAAGTAGGTGAAGACGT
AGCTTCTTTGTTTCGAAAAGAATTTTCGGATTGTTTGAGAAGGGACAAAGAAGGTAAAATTTTACTCGATTTAGAATCCT
TTCTCAAATTTCGTTTGGAGAAGAATGGAATTCGAGTTTTACTTCAATCTGATAAAATTTGTACTTTAGAAGAAAATTCA
GATTTCTTCAGTCATCGTAAAAAAGAAGTAGGAAGAAATCTGAATTTGATTTGGAAAGAAGGTTAG

Upstream 100 bases:

>100_bases
CCTTGGGAAAAAGGAACTCCCCCTGGTTTCTATGGAGGTGCAAACACAAAGGTCCGAAATTTCGAAACGGATTGGTGTTT
CGGAATCTTCCGTTTATCTT

Downstream 100 bases:

>100_bases
ACCTTGGGAACTTTTTTGATCGCTGCGTTAACTTTTTCCAAGATTTTTTCCCGTTTAATCGGTTTTGGAATATAATCCAT
TGCACCTTCGTCTATAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MNQVHGDGVVDLRTSKNLSFPEGDAWIGEELNQILCIKTADCMPLFFWSTQSPKFVAIHSGWKGTLAGITEKTLKRSFSD
SILKEGSLVGYLGPYASGLRYEVGEDVASLFRKEFSDCLRRDKEGKILLDLESFLKFRLEKNGIRVLLQSDKICTLEENS
DFFSHRKKEVGRNLNLIWKEG

Sequences:

>Translated_181_residues
MNQVHGDGVVDLRTSKNLSFPEGDAWIGEELNQILCIKTADCMPLFFWSTQSPKFVAIHSGWKGTLAGITEKTLKRSFSD
SILKEGSLVGYLGPYASGLRYEVGEDVASLFRKEFSDCLRRDKEGKILLDLESFLKFRLEKNGIRVLLQSDKICTLEENS
DFFSHRKKEVGRNLNLIWKEG
>Mature_181_residues
MNQVHGDGVVDLRTSKNLSFPEGDAWIGEELNQILCIKTADCMPLFFWSTQSPKFVAIHSGWKGTLAGITEKTLKRSFSD
SILKEGSLVGYLGPYASGLRYEVGEDVASLFRKEFSDCLRRDKEGKILLDLESFLKFRLEKNGIRVLLQSDKICTLEENS
DFFSHRKKEVGRNLNLIWKEG

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Escherichia coli, GI1788945, Length=182, Percent_Identity=30.2197802197802, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 20540; Mature: 20540

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQVHGDGVVDLRTSKNLSFPEGDAWIGEELNQILCIKTADCMPLFFWSTQSPKFVAIHS
CCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCEEEEEEECCCCEEEEECCCCCCEEEEEC
GWKGTLAGITEKTLKRSFSDSILKEGSLVGYLGPYASGLRYEVGEDVASLFRKEFSDCLR
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RDKEGKILLDLESFLKFRLEKNGIRVLLQSDKICTLEENSDFFSHRKKEVGRNLNLIWKE
CCCCCCEEEEHHHHHHHHHCCCCEEEEEECCCEEEEECCCHHHHHHHHHHCCCCEEEEEC
G
C
>Mature Secondary Structure
MNQVHGDGVVDLRTSKNLSFPEGDAWIGEELNQILCIKTADCMPLFFWSTQSPKFVAIHS
CCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCEEEEEEECCCCEEEEECCCCCCEEEEEC
GWKGTLAGITEKTLKRSFSDSILKEGSLVGYLGPYASGLRYEVGEDVASLFRKEFSDCLR
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RDKEGKILLDLESFLKFRLEKNGIRVLLQSDKICTLEENSDFFSHRKKEVGRNLNLIWKE
CCCCCCEEEEHHHHHHHHHCCCCEEEEEECCCEEEEECCCHHHHHHHHHHCCCCEEEEEC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]