Click here to switch to the map view.

The map label for this gene is 45657581

Identifier: 45657581

GI number: 45657581

Start: 2086747

End: 2087001

Strand: Reverse

Name: 45657581

Synonym: LIC11715

Alternate gene names: NA

Gene position: 2087001-2086747 (Counterclockwise)

Preceding gene: 45657582

Following gene: 45657578

Centisome position: 48.79

GC content: 29.8

Gene sequence:

>255_bases
ATGGGAACCGTAGGAACTATTACAAATCAAAGTTTTACAGTCAAACTTTCAAAATGTGGGAACTATTACAAATCGAAGTT
TTACAGTCAAACTTTCAAAATGTGGGAACTATTACAAATCGAAGTTTTACAGTTAAACTTTCAAAATGTGGGAACTATTA
CAAATCGAAGTTTTACAGTCAAACTTTCAAAATGTGGGAACTATTATAAATCGAAGTTTTACAGTCAAACTTTCAAAATG
TGGGAACTATTATAA

Upstream 100 bases:

>100_bases
TTTATCAAAAAAACATACTGAAAAAAATTCGAGCCTTACGCTAAAATCGTTTTAAAAAGTTTTTTAATTCAATCAAAGAA
AATCTTAGATCATTTTTAAA

Downstream 100 bases:

>100_bases
ATCGAAGTTTTACAATCAAACTTTCAAAATGTGGGAACTATTACAAATCATGGATTTTACGAAATGAATCTTGAAAATTT
AATGATGGTGATGATGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MGTVGTITNQSFTVKLSKCGNYYKSKFYSQTFKMWELLQIEVLQLNFQNVGTITNRSFTVKLSKCGNYYKSKFYSQTFKM
WELL

Sequences:

>Translated_84_residues
MGTVGTITNQSFTVKLSKCGNYYKSKFYSQTFKMWELLQIEVLQLNFQNVGTITNRSFTVKLSKCGNYYKSKFYSQTFKM
WELL
>Mature_83_residues
GTVGTITNQSFTVKLSKCGNYYKSKFYSQTFKMWELLQIEVLQLNFQNVGTITNRSFTVKLSKCGNYYKSKFYSQTFKMW
ELL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9911; Mature: 9779

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTVGTITNQSFTVKLSKCGNYYKSKFYSQTFKMWELLQIEVLQLNFQNVGTITNRSFTV
CCCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEECCCEEEE
KLSKCGNYYKSKFYSQTFKMWELL
EEHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GTVGTITNQSFTVKLSKCGNYYKSKFYSQTFKMWELLQIEVLQLNFQNVGTITNRSFTV
CCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEECCCEEEE
KLSKCGNYYKSKFYSQTFKMWELL
EEHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA