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The map label for this gene is 45657577

Identifier: 45657577

GI number: 45657577

Start: 2082319

End: 2082969

Strand: Reverse

Name: 45657577

Synonym: LIC11711

Alternate gene names: NA

Gene position: 2082969-2082319 (Counterclockwise)

Preceding gene: 45657578

Following gene: 45657576

Centisome position: 48.7

GC content: 34.72

Gene sequence:

>651_bases
ATGTCGGCTATAAAATCAAAATCCATTTTTAAAAATGCCTTATTTTTTTTAGGAATAAGCGGATTGTTATTTTTGTTACT
TTCTTGTTTTACTACAAAAAGTACAGATAACGAATCGATAAAATACGAATCGGTTCCTAATCCAGCAGGAGAAAACGAAG
TTGTATTAAACGAAGAAGGCCAAGAAACAACTTTAAATACGGGAGATCCTGCTTCTTTTTTAAAACCTTCCAAAGACCCT
TTAGAATATTTTAGAGTTCATATTTCGAGCGACGGTTATCAGCTACGTCAATTGAGAGGTTCTAAATTTATCAAAAGAAA
AGTAGATAAAGGGGGAGACGTTTTGATCAGCGAAGAATTGGCTCGTTATAACAAAATCAATTTTATAGACGATGGAATCA
TCATCGTAGTATTGAACGGAAATACGGGAGCATTTGAAACGATTCGTTTTAATACCAGGGTCCCCAGAATTAATGATCTC
GCTAAAATCGTTCAAAACGACGTAACACGTTGGTCTATGGAACATTCCGAAGAAAAACCGGTTGTGACCAAATTTCAGAT
CCACTATTCTTTAGAATTAAAAAATAAAACCGGCAGCACTCGAGACGCGGTCAAAGAAGAATTAAAAAAAGAAGTGATTC
GCAGAAAATAA

Upstream 100 bases:

>100_bases
GGGTTTTATAGAGTTCCCATTTTTAAAAACCATTCCATTTTGGATTTTTATAGAAGTTTTCATTTTTTAATCAGAAATCA
GTTCGGAGAATCAACGATCA

Downstream 100 bases:

>100_bases
TTAGCTATGATAACATTTTAGATTTCTATAAAATTCTCAGTATATACTAATCAAACACATAAAATAATACTAAAATGATG
AATGGGCAATTTTACTAAAG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSAIKSKSIFKNALFFLGISGLLFLLLSCFTTKSTDNESIKYESVPNPAGENEVVLNEEGQETTLNTGDPASFLKPSKDP
LEYFRVHISSDGYQLRQLRGSKFIKRKVDKGGDVLISEELARYNKINFIDDGIIIVVLNGNTGAFETIRFNTRVPRINDL
AKIVQNDVTRWSMEHSEEKPVVTKFQIHYSLELKNKTGSTRDAVKEELKKEVIRRK

Sequences:

>Translated_216_residues
MSAIKSKSIFKNALFFLGISGLLFLLLSCFTTKSTDNESIKYESVPNPAGENEVVLNEEGQETTLNTGDPASFLKPSKDP
LEYFRVHISSDGYQLRQLRGSKFIKRKVDKGGDVLISEELARYNKINFIDDGIIIVVLNGNTGAFETIRFNTRVPRINDL
AKIVQNDVTRWSMEHSEEKPVVTKFQIHYSLELKNKTGSTRDAVKEELKKEVIRRK
>Mature_215_residues
SAIKSKSIFKNALFFLGISGLLFLLLSCFTTKSTDNESIKYESVPNPAGENEVVLNEEGQETTLNTGDPASFLKPSKDPL
EYFRVHISSDGYQLRQLRGSKFIKRKVDKGGDVLISEELARYNKINFIDDGIIIVVLNGNTGAFETIRFNTRVPRINDLA
KIVQNDVTRWSMEHSEEKPVVTKFQIHYSLELKNKTGSTRDAVKEELKKEVIRRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24503; Mature: 24372

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIKSKSIFKNALFFLGISGLLFLLLSCFTTKSTDNESIKYESVPNPAGENEVVLNEEG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEECCCC
QETTLNTGDPASFLKPSKDPLEYFRVHISSDGYQLRQLRGSKFIKRKVDKGGDVLISEEL
CCCCCCCCCCHHHCCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHH
ARYNKINFIDDGIIIVVLNGNTGAFETIRFNTRVPRINDLAKIVQNDVTRWSMEHSEEKP
HHHCCCEEECCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
VVTKFQIHYSLELKNKTGSTRDAVKEELKKEVIRRK
CEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAIKSKSIFKNALFFLGISGLLFLLLSCFTTKSTDNESIKYESVPNPAGENEVVLNEEG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEECCCC
QETTLNTGDPASFLKPSKDPLEYFRVHISSDGYQLRQLRGSKFIKRKVDKGGDVLISEEL
CCCCCCCCCCHHHCCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHH
ARYNKINFIDDGIIIVVLNGNTGAFETIRFNTRVPRINDLAKIVQNDVTRWSMEHSEEKP
HHHCCCEEECCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
VVTKFQIHYSLELKNKTGSTRDAVKEELKKEVIRRK
CEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA