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The map label for this gene is 45657538

Identifier: 45657538

GI number: 45657538

Start: 2032002

End: 2033768

Strand: Direct

Name: 45657538

Synonym: LIC11670

Alternate gene names: NA

Gene position: 2032002-2033768 (Clockwise)

Preceding gene: 45657533

Following gene: 45657539

Centisome position: 47.51

GC content: 35.03

Gene sequence:

>1767_bases
TTGGAGTATTACAATCGTTACATTCATTGTTCCGAAGAATTACAGAAAGAAGTTTCTCCGGTTTCCAGAGTTGCAAAAGC
AAGTGTACATTTTTTCTTAGAACAATTGGAAAATGCTTCCAAAGAAGTAGATGCAGCACTTATTTCCGATTCAAGTTTTA
GAGAAGGTTATATTTTAAAGGCTAAAATTTTAATTCGTTTCGGTGAATTTCAAAAAGCGAGCGATTTTTTAGAAACAAAC
CTAAGTCGTTTTCCGGACGATTCCGATTTTCTTTATCTTTTAGGTACTCTCAACCAAGAACTTAAAAATTATCCGAGAGC
AATTCTTTATCTAACTTCTTTGAGCGATACCATTCGAAATCGGGAAGGAAATCCAAAATATAGATCTTTTGTGGACAAGT
CTTTGGGGGAGATTTATTTTGCAAACGCACAACCTAAAAAAGCGCTCTATTTTTTAAATTCTTATCTACATCAAAATCCA
AGTGATCTTTCTGCAAGACTGACTCTTGCAAAAATCTGGAATCAATTGGGTAAATTCTCTTCTGCCCGCAAAGAGCTAAA
CAGAATTTTAAAGACTAAAAAAAATCTTTCTTCTGTGGAACATCTTCTTGCGGAAATGTATTTTATAGAAAGTAGAGCGT
CAGCATTTGAATATTTTAATATTCTTAACAAAAATTCTAAAATTCCTAAGGGAGGAGTTTTGGAAGGACTTTATTTGATT
CTTCAGGGTAAAACTAAGCAGGCGAAAGTCTTGCTTTTGCCTGTAAAAGAAAAATTTCCGAGTCGTTTAGCTGTTAGACT
GGCTATGTTAGACGTATATGAAACGGAAAATAACACTTCTTTATTTTTGAAAGAACTCAAAGAAGTAGCCGAACTTGTGT
TCGGGATGCAGCAGTTTGAACTTGCGGAAAGAATCGCACAGAGGGCGTTATCGGTGTCCAATAAATCTTCGGAATGGAGT
AAATCGGAGATATATGATTTTCTTGCTTCTTGTCATGAACAATCAGGTTATATTTATCGTGCCATTTTGATGTCAAGAAA
AGCAGTAGAAAACTCTAAAAAGGAAGAGGAGACTCTTAAGTTTCAATTACATCTTGCGTATTTACTTAGAAACGACCCTC
CCGATAAAAAAGAGGAAGCGGAAACACTCATTCGAAACGTTTTGCAAATTCGTCCAGAAATGTCTTATGCTAGATATTTA
CTCGGGGTCGTTTTAGCTTCTAACGAGAAGTATAAAGAAGCATTAGAGGAATTGAATGTAGCGATAGAAACGGATCCAGA
AAATCCGGTTTACTATTTTTATAGGGCTTCGGTTCATGAAAGATTGGAACAACAAGAATTTATGGAAAGGGATTTAAAAA
AATCGATAGAAATTGATCCAGGAAATCCGGTTGCATACAATTATTTGGGATATTATCTTTCTGAAAAAGGGGTTCGTCTG
GAAGAATCTCTTTCTCTTGTTCAGAAAGCTGTAGAACTCGCACCTGACAATGAGGCTTATCAGGATAGCCTAGGTTGGAT
TTTTTTCAAACTAGGAAATCACGAAGAAGCACTTTTACATCTTCAACTCGCCTATCAAATTCTAAAAGACAAAGGAGGAG
AAGATCCGGTCATTTTAGAACATTTAGGAGACGTTTATAAAGAAAAAAACCAAGGTGGAAACGCGGTCGCTTATTGGGAA
AAAAGTCTAAAACTTTTTAAAAAGAAAGAAGATATTTATAGGATTCAAAAAAAAATACAAACCGGTGTTAGACAAAATAA
CAAATGA

Upstream 100 bases:

>100_bases
ATATTTTCTTTCTCTTGCATTTGAAAGACAAGCGAATGCTGCAAGAATTCAATCTCAAGAACAATTTCAAGAGGAATCTA
AAAAGATTTATGAAGAATCT

Downstream 100 bases:

>100_bases
GTTATTATGAAATTTAAAGTATATTTTAATATTCTAATATTATTTTTAATCTTAAATGGTGGCAATTGTAGTACTGCTCA
AATTGAAGAAATTTCTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 588

Protein sequence:

>588_residues
MEYYNRYIHCSEELQKEVSPVSRVAKASVHFFLEQLENASKEVDAALISDSSFREGYILKAKILIRFGEFQKASDFLETN
LSRFPDDSDFLYLLGTLNQELKNYPRAILYLTSLSDTIRNREGNPKYRSFVDKSLGEIYFANAQPKKALYFLNSYLHQNP
SDLSARLTLAKIWNQLGKFSSARKELNRILKTKKNLSSVEHLLAEMYFIESRASAFEYFNILNKNSKIPKGGVLEGLYLI
LQGKTKQAKVLLLPVKEKFPSRLAVRLAMLDVYETENNTSLFLKELKEVAELVFGMQQFELAERIAQRALSVSNKSSEWS
KSEIYDFLASCHEQSGYIYRAILMSRKAVENSKKEEETLKFQLHLAYLLRNDPPDKKEEAETLIRNVLQIRPEMSYARYL
LGVVLASNEKYKEALEELNVAIETDPENPVYYFYRASVHERLEQQEFMERDLKKSIEIDPGNPVAYNYLGYYLSEKGVRL
EESLSLVQKAVELAPDNEAYQDSLGWIFFKLGNHEEALLHLQLAYQILKDKGGEDPVILEHLGDVYKEKNQGGNAVAYWE
KSLKLFKKKEDIYRIQKKIQTGVRQNNK

Sequences:

>Translated_588_residues
MEYYNRYIHCSEELQKEVSPVSRVAKASVHFFLEQLENASKEVDAALISDSSFREGYILKAKILIRFGEFQKASDFLETN
LSRFPDDSDFLYLLGTLNQELKNYPRAILYLTSLSDTIRNREGNPKYRSFVDKSLGEIYFANAQPKKALYFLNSYLHQNP
SDLSARLTLAKIWNQLGKFSSARKELNRILKTKKNLSSVEHLLAEMYFIESRASAFEYFNILNKNSKIPKGGVLEGLYLI
LQGKTKQAKVLLLPVKEKFPSRLAVRLAMLDVYETENNTSLFLKELKEVAELVFGMQQFELAERIAQRALSVSNKSSEWS
KSEIYDFLASCHEQSGYIYRAILMSRKAVENSKKEEETLKFQLHLAYLLRNDPPDKKEEAETLIRNVLQIRPEMSYARYL
LGVVLASNEKYKEALEELNVAIETDPENPVYYFYRASVHERLEQQEFMERDLKKSIEIDPGNPVAYNYLGYYLSEKGVRL
EESLSLVQKAVELAPDNEAYQDSLGWIFFKLGNHEEALLHLQLAYQILKDKGGEDPVILEHLGDVYKEKNQGGNAVAYWE
KSLKLFKKKEDIYRIQKKIQTGVRQNNK
>Mature_588_residues
MEYYNRYIHCSEELQKEVSPVSRVAKASVHFFLEQLENASKEVDAALISDSSFREGYILKAKILIRFGEFQKASDFLETN
LSRFPDDSDFLYLLGTLNQELKNYPRAILYLTSLSDTIRNREGNPKYRSFVDKSLGEIYFANAQPKKALYFLNSYLHQNP
SDLSARLTLAKIWNQLGKFSSARKELNRILKTKKNLSSVEHLLAEMYFIESRASAFEYFNILNKNSKIPKGGVLEGLYLI
LQGKTKQAKVLLLPVKEKFPSRLAVRLAMLDVYETENNTSLFLKELKEVAELVFGMQQFELAERIAQRALSVSNKSSEWS
KSEIYDFLASCHEQSGYIYRAILMSRKAVENSKKEEETLKFQLHLAYLLRNDPPDKKEEAETLIRNVLQIRPEMSYARYL
LGVVLASNEKYKEALEELNVAIETDPENPVYYFYRASVHERLEQQEFMERDLKKSIEIDPGNPVAYNYLGYYLSEKGVRL
EESLSLVQKAVELAPDNEAYQDSLGWIFFKLGNHEEALLHLQLAYQILKDKGGEDPVILEHLGDVYKEKNQGGNAVAYWE
KSLKLFKKKEDIYRIQKKIQTGVRQNNK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011717
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]

EC number: NA

Molecular weight: Translated: 68080; Mature: 68080

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYYNRYIHCSEELQKEVSPVSRVAKASVHFFLEQLENASKEVDAALISDSSFREGYILK
CCHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
AKILIRFGEFQKASDFLETNLSRFPDDSDFLYLLGTLNQELKNYPRAILYLTSLSDTIRN
EEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCHHEEEHHHHHHHHHC
REGNPKYRSFVDKSLGEIYFANAQPKKALYFLNSYLHQNPSDLSARLTLAKIWNQLGKFS
CCCCCHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SARKELNRILKTKKNLSSVEHLLAEMYFIESRASAFEYFNILNKNSKIPKGGVLEGLYLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHE
LQGKTKQAKVLLLPVKEKFPSRLAVRLAMLDVYETENNTSLFLKELKEVAELVFGMQQFE
EECCCCCCEEEEEECHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LAERIAQRALSVSNKSSEWSKSEIYDFLASCHEQSGYIYRAILMSRKAVENSKKEEETLK
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHH
FQLHLAYLLRNDPPDKKEEAETLIRNVLQIRPEMSYARYLLGVVLASNEKYKEALEELNV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCE
AIETDPENPVYYFYRASVHERLEQQEFMERDLKKSIEIDPGNPVAYNYLGYYLSEKGVRL
EEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCEECCCCCCEEHHHHHHHHHCCCCCH
EESLSLVQKAVELAPDNEAYQDSLGWIFFKLGNHEEALLHLQLAYQILKDKGGEDPVILE
HHHHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHH
HLGDVYKEKNQGGNAVAYWEKSLKLFKKKEDIYRIQKKIQTGVRQNNK
HHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEYYNRYIHCSEELQKEVSPVSRVAKASVHFFLEQLENASKEVDAALISDSSFREGYILK
CCHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
AKILIRFGEFQKASDFLETNLSRFPDDSDFLYLLGTLNQELKNYPRAILYLTSLSDTIRN
EEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCHHEEEHHHHHHHHHC
REGNPKYRSFVDKSLGEIYFANAQPKKALYFLNSYLHQNPSDLSARLTLAKIWNQLGKFS
CCCCCHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SARKELNRILKTKKNLSSVEHLLAEMYFIESRASAFEYFNILNKNSKIPKGGVLEGLYLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHE
LQGKTKQAKVLLLPVKEKFPSRLAVRLAMLDVYETENNTSLFLKELKEVAELVFGMQQFE
EECCCCCCEEEEEECHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LAERIAQRALSVSNKSSEWSKSEIYDFLASCHEQSGYIYRAILMSRKAVENSKKEEETLK
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHH
FQLHLAYLLRNDPPDKKEEAETLIRNVLQIRPEMSYARYLLGVVLASNEKYKEALEELNV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCE
AIETDPENPVYYFYRASVHERLEQQEFMERDLKKSIEIDPGNPVAYNYLGYYLSEKGVRL
EEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCEECCCCCCEEHHHHHHHHHCCCCCH
EESLSLVQKAVELAPDNEAYQDSLGWIFFKLGNHEEALLHLQLAYQILKDKGGEDPVILE
HHHHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHH
HLGDVYKEKNQGGNAVAYWEKSLKLFKKKEDIYRIQKKIQTGVRQNNK
HHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7883699; 10984043 [H]