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The map label for this gene is fliS

Identifier: 45657527

GI number: 45657527

Start: 2022767

End: 2023219

Strand: Direct

Name: fliS

Synonym: LIC11657

Alternate gene names: 45657527

Gene position: 2022767-2023219 (Clockwise)

Preceding gene: 45657520

Following gene: 45657528

Centisome position: 47.29

GC content: 39.07

Gene sequence:

>453_bases
ATGTCACTTGCTAGAAAATCCACAGCGACCGTTGAACAATATAAATCCAACGAAATCTCGACTGTCAGTCAGGGAAAACT
GATCGTCATGCTTTATGACGGTGCGATCCGTTTTCTAAATATCGCTCTGGAGAATAATACTCCCCGGAAATACGATGTGG
TAAACAATCATATACTGAAAGCCGGAGAAATCGTTACTGAACTTATGCTTGCACTCAATTTAGAACAAGGCGGGGAAGTG
GCTAACAACCTCCTAGGAATTTACGTTTATATTAAAAAACGTCTTCTAGAAGCAAATATGAAGAAAGATTCCGAAATCAT
CCAAGAAATTATTAAATATATGGAAGATCTAAAATCCGCTTGGGAAGAAATCGAGAAAAAAGAGAAATCCAATGTTGTTT
CGGCACCTTTCCAAAGTTCCAATCGTGGAAGTGGTTTGTCCATTCAGGGGTGA

Upstream 100 bases:

>100_bases
TTTCAAAACCGTTTAAAGTTTTGAAAGAAACCGCAAGAATGTTCAGACCCAGCATTAAGGAGCCAAACATTTTTGTCGAA
AAGTATTTCAGGAGAGATAC

Downstream 100 bases:

>100_bases
ACTTTTTGTCGGATTTAAATTCAATCCATCCAGATCAAAGTTTAATTGTTCTTTACGGAGATAAGATTTTACTTTTAGAT
CAATTGATTTCTAATCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSLARKSTATVEQYKSNEISTVSQGKLIVMLYDGAIRFLNIALENNTPRKYDVVNNHILKAGEIVTELMLALNLEQGGEV
ANNLLGIYVYIKKRLLEANMKKDSEIIQEIIKYMEDLKSAWEEIEKKEKSNVVSAPFQSSNRGSGLSIQG

Sequences:

>Translated_150_residues
MSLARKSTATVEQYKSNEISTVSQGKLIVMLYDGAIRFLNIALENNTPRKYDVVNNHILKAGEIVTELMLALNLEQGGEV
ANNLLGIYVYIKKRLLEANMKKDSEIIQEIIKYMEDLKSAWEEIEKKEKSNVVSAPFQSSNRGSGLSIQG
>Mature_149_residues
SLARKSTATVEQYKSNEISTVSQGKLIVMLYDGAIRFLNIALENNTPRKYDVVNNHILKAGEIVTELMLALNLEQGGEVA
NNLLGIYVYIKKRLLEANMKKDSEIIQEIIKYMEDLKSAWEEIEKKEKSNVVSAPFQSSNRGSGLSIQG

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 16824; Mature: 16692

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLARKSTATVEQYKSNEISTVSQGKLIVMLYDGAIRFLNIALENNTPRKYDVVNNHILK
CCCCHHHHHHHHHHCCCCCCEECCCCEEEEEECCCEEEEEEEECCCCCCEEHHHHHHHHH
AGEIVTELMLALNLEQGGEVANNLLGIYVYIKKRLLEANMKKDSEIIQEIIKYMEDLKSA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
WEEIEKKEKSNVVSAPFQSSNRGSGLSIQG
HHHHHHHHHCCEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLARKSTATVEQYKSNEISTVSQGKLIVMLYDGAIRFLNIALENNTPRKYDVVNNHILK
CCCHHHHHHHHHHCCCCCCEECCCCEEEEEECCCEEEEEEEECCCCCCEEHHHHHHHHH
AGEIVTELMLALNLEQGGEVANNLLGIYVYIKKRLLEANMKKDSEIIQEIIKYMEDLKSA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
WEEIEKKEKSNVVSAPFQSSNRGSGLSIQG
HHHHHHHHHCCEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8195064; 9384377 [H]