Click here to switch to the map view.

The map label for this gene is 45657524

Identifier: 45657524

GI number: 45657524

Start: 2019559

End: 2020185

Strand: Reverse

Name: 45657524

Synonym: LIC11654

Alternate gene names: NA

Gene position: 2020185-2019559 (Counterclockwise)

Preceding gene: 45657525

Following gene: 45657523

Centisome position: 47.23

GC content: 34.77

Gene sequence:

>627_bases
ATGGAATTTCTACTTTATCTAATCTTTTTTGGAATTGTTTCCATCTTACTCGTCTTAGCAAGTTATTACTTTAAACTTCT
CTTTTTATCCGGAAGAGAATCTTTTGAAAGATTAGAGTTAGTCGATTGGATACGAATCGTTCCAAACGAACTTATCAAAC
TTTTAGAATCCGGTGGAAGTCTACAATATGCTGGAATTGCATTTTTTGTTTCTGCATTTGTTTCCTACCTTTGGACACTT
TTAGGAGGAATGATAGGTGCTCCTCATTACGCAGATTCCTTTGGAAATTATTTTTTTCTATCATTTCTGTTGCCGGTAAC
TCTACTCACTACGTATGGAATTCTTGTAGAACTAGTTCTGAAAGATCTTCCTTCCACAAATCCAAATCATTTTTTAGTTC
TATTTTTAGAACAAGAAGTCGCCATTCTAAGCGGATGTTCTATTTCGGTAATCGCCTCTAATCTTGCGGTTTACGGGTTA
TTTCATGAAATTTCGTTTTTATTCGTTTTTCCGAATATATCTATCATTGCGGTTTTACTCGTTCTACGTTGGAACGGAAA
AGTAAAAATCGGAGGAATCCAATTTTCAGGTTCGAAAAACCGTTCTTTCCAGGAAGATTCTGAATAA

Upstream 100 bases:

>100_bases
AACCAGGTGGTTCTGTCCGAGACGAGGAAGTAATTCAAGCCGCAGACGAACACGGACTGATTATGGTTTTTACTGGAATG
AGGCATTTTAGACACTGATT

Downstream 100 bases:

>100_bases
ATTTCTCTAAAAATTGCCGATAGGTAGAATATGAGAATTTTTGCACTTTTATTTTGTTTATTTCTAATTTCTACAGCCGA
ACTTTTTGCACAACTTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MEFLLYLIFFGIVSILLVLASYYFKLLFLSGRESFERLELVDWIRIVPNELIKLLESGGSLQYAGIAFFVSAFVSYLWTL
LGGMIGAPHYADSFGNYFFLSFLLPVTLLTTYGILVELVLKDLPSTNPNHFLVLFLEQEVAILSGCSISVIASNLAVYGL
FHEISFLFVFPNISIIAVLLVLRWNGKVKIGGIQFSGSKNRSFQEDSE

Sequences:

>Translated_208_residues
MEFLLYLIFFGIVSILLVLASYYFKLLFLSGRESFERLELVDWIRIVPNELIKLLESGGSLQYAGIAFFVSAFVSYLWTL
LGGMIGAPHYADSFGNYFFLSFLLPVTLLTTYGILVELVLKDLPSTNPNHFLVLFLEQEVAILSGCSISVIASNLAVYGL
FHEISFLFVFPNISIIAVLLVLRWNGKVKIGGIQFSGSKNRSFQEDSE
>Mature_208_residues
MEFLLYLIFFGIVSILLVLASYYFKLLFLSGRESFERLELVDWIRIVPNELIKLLESGGSLQYAGIAFFVSAFVSYLWTL
LGGMIGAPHYADSFGNYFFLSFLLPVTLLTTYGILVELVLKDLPSTNPNHFLVLFLEQEVAILSGCSISVIASNLAVYGL
FHEISFLFVFPNISIIAVLLVLRWNGKVKIGGIQFSGSKNRSFQEDSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23348; Mature: 23348

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLLYLIFFGIVSILLVLASYYFKLLFLSGRESFERLELVDWIRIVPNELIKLLESGGS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LQYAGIAFFVSAFVSYLWTLLGGMIGAPHYADSFGNYFFLSFLLPVTLLTTYGILVELVL
EEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDLPSTNPNHFLVLFLEQEVAILSGCSISVIASNLAVYGLFHEISFLFVFPNISIIAVLL
HHCCCCCCCEEEEEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHH
VLRWNGKVKIGGIQFSGSKNRSFQEDSE
HHHCCCEEEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MEFLLYLIFFGIVSILLVLASYYFKLLFLSGRESFERLELVDWIRIVPNELIKLLESGGS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LQYAGIAFFVSAFVSYLWTLLGGMIGAPHYADSFGNYFFLSFLLPVTLLTTYGILVELVL
EEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDLPSTNPNHFLVLFLEQEVAILSGCSISVIASNLAVYGLFHEISFLFVFPNISIIAVLL
HHCCCCCCCEEEEEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHH
VLRWNGKVKIGGIQFSGSKNRSFQEDSE
HHHCCCEEEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA