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The map label for this gene is yliI [C]

Identifier: 45657514

GI number: 45657514

Start: 2007962

End: 2009311

Strand: Direct

Name: yliI [C]

Synonym: LIC11642

Alternate gene names: 45657514

Gene position: 2007962-2009311 (Clockwise)

Preceding gene: 45657509

Following gene: 45657515

Centisome position: 46.95

GC content: 34.44

Gene sequence:

>1350_bases
TTGCAAATCAGTATCATGTTTCAGATTCGTGATATTTGTTCTATTTTTTTAAGAATCTATTTTTATCGATTTTGTCGGTT
AGAATGGATCTTGTTGTTAGTGTCTAAGTTGTTCTCACTTTTTTGCAATCTTGAAAATTTTATAACTCGTTTTATTCGAT
TGTATTCTTGTATTTTTTTATTCAGAGTTCTTTTGACGATTGGAGTCGTTCTTATACTTGATTCCCCATTGACCGCAGAT
AAGAAACAACCTAGAAGAAATGTTATAAAGACAAAAGTTGAATCGATTGGATATGTCTCGGTTGCAGATGGATTTCAAGA
ACCAACGGATATTCAATTTTTTCCCGGAGATCCAAAACGAATGATCATTTTGGAAAAAAGAGGAAAGTTGATAGAGGTTG
ATTTAACTACAAAGGTCAAGACTCTCAGAGCTGATTTTACGGGTCAGATAGAGACTCGTTCAGAAGAAGGGCTTTTAGGT
CTTGCATTTTCTCCGGATTTTCAAACAGATTCTAAATTTTTTGTAAATGTAATCGTAAAAGAAGGAGGAAAGGATTATTC
TAAAATTTTAGAATTTGAGTGGAAAGAGCATTTAGTTCAAAAAATTGAACATTCCAAAAGAATGATATTAAAGTTGGAAC
AACCTTATTCGAATCATAACGGAGGACAACTTGCGTTTGGTCCGGATCGAAAACTATATATAGGTTTTGGAGACGGGGGA
GGAGCAAACGATCCATATAAAAACGGACAAAATCCAGGTACATTTTTAGGAAAATTATTACGAATTCTTCCCAATCCTCA
TGCTGCAGGAGCCGCTTATAAGGTTCCGGAAGACAATCCATTTGTACATCACCCCGGTTTTTTACCTGAAATTTGGAGTT
ACGGCTTTCGAAATCCTTGGAGATTTTCTTTTGATAAACTTACCGGTGAACTGTATGTAGCCGATGTAGGACAAAACGAA
TTTGAGGAAATCGATCTGATCCAGAAGGGAGGTAATTACGGTTGGAACATTCGAGAAGGATTTCATTGTTTTAAAAAAAA
TCCAGGTTGTGTAGATAATTTTTTGATCGATCCAATTCATGAATATTCCAGAGAAGAGGGGCAATCGATTACGGGTGGTT
ATGTGTATAGAGGAAAGGAAATCCCGAAACTTGTAGGTTCTTATCTATATGGAGATTTTGTAACTGGTAAAATTTGGGCT
TTAAAACAAAAAAATGGTAAAAAAATTTCCAATGAATTAGTTATACAAGTTCCGTTTCAAATTAGTACTTTTGGTCAAGA
TATATCCGGAGAGGTATATTTTACCGACTTTGGTTCAGGAAATATCTTTCGTATAGCAAAAAAAAATTGA

Upstream 100 bases:

>100_bases
TTAAGTATTGTTCTGAGTTTTTACATTTTTAAAAAATACTTTAAAACTCTCGAAATGAAAACTCGTTTCTAAATTCAAAT
TGACTCATAAATAGAAAAAA

Downstream 100 bases:

>100_bases
AAGATTTGCGAAAAATGATTCTATTGCTTGTTGAGAAACAATAGATAGAGGCTGCCCCACCGCAGTCCTGTTATCAATCC
AATCTTAAGGAAAATGGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MQISIMFQIRDICSIFLRIYFYRFCRLEWILLLVSKLFSLFCNLENFITRFIRLYSCIFLFRVLLTIGVVLILDSPLTAD
KKQPRRNVIKTKVESIGYVSVADGFQEPTDIQFFPGDPKRMIILEKRGKLIEVDLTTKVKTLRADFTGQIETRSEEGLLG
LAFSPDFQTDSKFFVNVIVKEGGKDYSKILEFEWKEHLVQKIEHSKRMILKLEQPYSNHNGGQLAFGPDRKLYIGFGDGG
GANDPYKNGQNPGTFLGKLLRILPNPHAAGAAYKVPEDNPFVHHPGFLPEIWSYGFRNPWRFSFDKLTGELYVADVGQNE
FEEIDLIQKGGNYGWNIREGFHCFKKNPGCVDNFLIDPIHEYSREEGQSITGGYVYRGKEIPKLVGSYLYGDFVTGKIWA
LKQKNGKKISNELVIQVPFQISTFGQDISGEVYFTDFGSGNIFRIAKKN

Sequences:

>Translated_449_residues
MQISIMFQIRDICSIFLRIYFYRFCRLEWILLLVSKLFSLFCNLENFITRFIRLYSCIFLFRVLLTIGVVLILDSPLTAD
KKQPRRNVIKTKVESIGYVSVADGFQEPTDIQFFPGDPKRMIILEKRGKLIEVDLTTKVKTLRADFTGQIETRSEEGLLG
LAFSPDFQTDSKFFVNVIVKEGGKDYSKILEFEWKEHLVQKIEHSKRMILKLEQPYSNHNGGQLAFGPDRKLYIGFGDGG
GANDPYKNGQNPGTFLGKLLRILPNPHAAGAAYKVPEDNPFVHHPGFLPEIWSYGFRNPWRFSFDKLTGELYVADVGQNE
FEEIDLIQKGGNYGWNIREGFHCFKKNPGCVDNFLIDPIHEYSREEGQSITGGYVYRGKEIPKLVGSYLYGDFVTGKIWA
LKQKNGKKISNELVIQVPFQISTFGQDISGEVYFTDFGSGNIFRIAKKN
>Mature_449_residues
MQISIMFQIRDICSIFLRIYFYRFCRLEWILLLVSKLFSLFCNLENFITRFIRLYSCIFLFRVLLTIGVVLILDSPLTAD
KKQPRRNVIKTKVESIGYVSVADGFQEPTDIQFFPGDPKRMIILEKRGKLIEVDLTTKVKTLRADFTGQIETRSEEGLLG
LAFSPDFQTDSKFFVNVIVKEGGKDYSKILEFEWKEHLVQKIEHSKRMILKLEQPYSNHNGGQLAFGPDRKLYIGFGDGG
GANDPYKNGQNPGTFLGKLLRILPNPHAAGAAYKVPEDNPFVHHPGFLPEIWSYGFRNPWRFSFDKLTGELYVADVGQNE
FEEIDLIQKGGNYGWNIREGFHCFKKNPGCVDNFLIDPIHEYSREEGQSITGGYVYRGKEIPKLVGSYLYGDFVTGKIWA
LKQKNGKKISNELVIQVPFQISTFGQDISGEVYFTDFGSGNIFRIAKKN

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Homo sapiens, GI187936955, Length=441, Percent_Identity=34.9206349206349, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI187936953, Length=441, Percent_Identity=34.9206349206349, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI124248546, Length=314, Percent_Identity=43.312101910828, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI20143973, Length=385, Percent_Identity=23.8961038961039, Blast_Score=93, Evalue=6e-19,
Organism=Escherichia coli, GI1787060, Length=240, Percent_Identity=27.9166666666667, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 51429; Mature: 51429

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQISIMFQIRDICSIFLRIYFYRFCRLEWILLLVSKLFSLFCNLENFITRFIRLYSCIFL
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
FRVLLTIGVVLILDSPLTADKKQPRRNVIKTKVESIGYVSVADGFQEPTDIQFFPGDPKR
HHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCEEEECCCCCE
MIILEKRGKLIEVDLTTKVKTLRADFTGQIETRSEEGLLGLAFSPDFQTDSKFFVNVIVK
EEEEECCCCEEEEEECHHHHHHHCCCCCCEECCCCCCEEEEEECCCCCCCCEEEEEEEEE
EGGKDYSKILEFEWKEHLVQKIEHSKRMILKLEQPYSNHNGGQLAFGPDRKLYIGFGDGG
CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCCEEEEEECCCC
GANDPYKNGQNPGTFLGKLLRILPNPHAAGAAYKVPEDNPFVHHPGFLPEIWSYGFRNPW
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEECCCCCHHHHHCCCCCCC
RFSFDKLTGELYVADVGQNEFEEIDLIQKGGNYGWNIREGFHCFKKNPGCVDNFLIDPIH
CEEHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHCCHHH
EYSREEGQSITGGYVYRGKEIPKLVGSYLYGDFVTGKIWALKQKNGKKISNELVIQVPFQ
HHHHHCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCE
ISTFGQDISGEVYFTDFGSGNIFRIAKKN
EEECCCCCCCEEEEEECCCCCEEEEEECC
>Mature Secondary Structure
MQISIMFQIRDICSIFLRIYFYRFCRLEWILLLVSKLFSLFCNLENFITRFIRLYSCIFL
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
FRVLLTIGVVLILDSPLTADKKQPRRNVIKTKVESIGYVSVADGFQEPTDIQFFPGDPKR
HHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCEEEECCCCCE
MIILEKRGKLIEVDLTTKVKTLRADFTGQIETRSEEGLLGLAFSPDFQTDSKFFVNVIVK
EEEEECCCCEEEEEECHHHHHHHCCCCCCEECCCCCCEEEEEECCCCCCCCEEEEEEEEE
EGGKDYSKILEFEWKEHLVQKIEHSKRMILKLEQPYSNHNGGQLAFGPDRKLYIGFGDGG
CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCCEEEEEECCCC
GANDPYKNGQNPGTFLGKLLRILPNPHAAGAAYKVPEDNPFVHHPGFLPEIWSYGFRNPW
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEECCCCCHHHHHCCCCCCC
RFSFDKLTGELYVADVGQNEFEEIDLIQKGGNYGWNIREGFHCFKKNPGCVDNFLIDPIH
CEEHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHCCHHH
EYSREEGQSITGGYVYRGKEIPKLVGSYLYGDFVTGKIWALKQKNGKKISNELVIQVPFQ
HHHHHCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCE
ISTFGQDISGEVYFTDFGSGNIFRIAKKN
EEECCCCCCCEEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]