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The map label for this gene is 45657513

Identifier: 45657513

GI number: 45657513

Start: 2006426

End: 2007736

Strand: Reverse

Name: 45657513

Synonym: LIC11641

Alternate gene names: NA

Gene position: 2007736-2006426 (Counterclockwise)

Preceding gene: 45657517

Following gene: 45657512

Centisome position: 46.94

GC content: 37.22

Gene sequence:

>1311_bases
ATGGAAGTTACAAATTCAGTCCGCCAAATTTCTACTATTTCGCTTCTGGAAGAAATGGAAAAAAAATACAAATCCATTCC
AATCGAAGCGATCGTTAAACAAGATATTCTTAGACAAGGAATTCATTTTCTCAAAGAAGTTTTTGAAGTAACCGATCCGT
ACAAAACCAAAGATTATTTTATATTCTCTTTTGATCATATTCCTCTTTCCGAATTAGGAGACGTAAAAGCTCCCGAAGAA
ATTAAAGTCTCAGGTGGTCATTTTGATCTGCTTCCTACGGTAATCTCCACTCGAAATAATCCAAGTTCACCGTATAAAGT
AAAAAAGTCCTCAGATGGAAAACCAGTTCTTTATCTTGGAGAAACGTTTTTAGGAAATTTGGAATTTCCTCCACTTCCCG
CTTGGTATCGTCATAAAACTAAAAACGGAAAAATCCCAGGAGAAATTGCACCTGTAATCGAATGGGGTTATTTAATCTAT
CTCACAGTTTTTAGAAACTGTCAGTATTTTGGTAAAGAAGAAGAATGTGCTTACTGTGATATCAATCACAACTATCGTCA
GCAAAAAAACGCGGGGCGTCCTTACACTGGTGTTAAAGATATAGAAGATATTTTAGAAGTTTTATCTTGGATCGATTCAG
AAGACCATACAGCAAAAGTTTATACAATTACCGGTGGGAGTGTAATTACTTCCTTAAAGAAAAAAAATGAAATCGATTTT
TATCTAGACTATGCAACTGCAATCGAATCCAAATTTCCTGGAAGATGGATGGGTAAAATCGTTTCTCAGGCATGGGAGAT
AGAAGATTGTAAAAAATTTAAAGAAGCAGGAATCCAAGTTTACCATCCTAACTATGAAGTCTGGGACAAAAATCTATTTC
AAAAAATCTGTCCCGGTAAGGAAGCTTATATAGGAAGAGACAATTGGATTCGAAGAGTTGTAGATTCTGCAGAAGTGTTC
GGTCCTTCTTATGTAATTCCAAACTTTGTAGGTGGAGTAGAACTTTCCAAACCTTACGGATTTTCAACCGTCGCAGAAGC
AATCACCTCTACAAGAGAGGGTTTAGATTTTTTTATGTCGAAAGGAATCATGCCTCGATTTACAGCTTGGTGTCCCGAAC
CCTATACAACGTTAGGAACACAGGCAGGCCCACCTTTAGAATATTTCTGTGAACTTCTGACTGTATGGAAAGCTACATTC
GAAAAATATAATTTACCGATTCCACCAGGTTACGGTGAGCCAGGCCCCGGAAAAGCTGTTTTTTCCGTTTCCGCTTTTAT
GGACGTAATCGGATACTCTGGAAGAAATTGA

Upstream 100 bases:

>100_bases
CGACAAAAATTTGAAGTACTCAATTTTATAGAGATCCCTAAAAAAGCCCTTAAAAACTGCGTGTCATTTCAGTATCTTCG
GAAAAAAATGTAGAATCGAG

Downstream 100 bases:

>100_bases
AAATAAACAAACCTGCTCCCAGTAAAATTTAAGATTAAATCTTGGAACAAATTCTAAACTTAAAAACATTCATAAATTTG
AATACTCTATATCGTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Elongator /MiaB/NifB; Fe-S Protein; Radical SAM Domain Protein; Radical SAM Family Protein; Radical SAM Family Fe-S Protein

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MEVTNSVRQISTISLLEEMEKKYKSIPIEAIVKQDILRQGIHFLKEVFEVTDPYKTKDYFIFSFDHIPLSELGDVKAPEE
IKVSGGHFDLLPTVISTRNNPSSPYKVKKSSDGKPVLYLGETFLGNLEFPPLPAWYRHKTKNGKIPGEIAPVIEWGYLIY
LTVFRNCQYFGKEEECAYCDINHNYRQQKNAGRPYTGVKDIEDILEVLSWIDSEDHTAKVYTITGGSVITSLKKKNEIDF
YLDYATAIESKFPGRWMGKIVSQAWEIEDCKKFKEAGIQVYHPNYEVWDKNLFQKICPGKEAYIGRDNWIRRVVDSAEVF
GPSYVIPNFVGGVELSKPYGFSTVAEAITSTREGLDFFMSKGIMPRFTAWCPEPYTTLGTQAGPPLEYFCELLTVWKATF
EKYNLPIPPGYGEPGPGKAVFSVSAFMDVIGYSGRN

Sequences:

>Translated_436_residues
MEVTNSVRQISTISLLEEMEKKYKSIPIEAIVKQDILRQGIHFLKEVFEVTDPYKTKDYFIFSFDHIPLSELGDVKAPEE
IKVSGGHFDLLPTVISTRNNPSSPYKVKKSSDGKPVLYLGETFLGNLEFPPLPAWYRHKTKNGKIPGEIAPVIEWGYLIY
LTVFRNCQYFGKEEECAYCDINHNYRQQKNAGRPYTGVKDIEDILEVLSWIDSEDHTAKVYTITGGSVITSLKKKNEIDF
YLDYATAIESKFPGRWMGKIVSQAWEIEDCKKFKEAGIQVYHPNYEVWDKNLFQKICPGKEAYIGRDNWIRRVVDSAEVF
GPSYVIPNFVGGVELSKPYGFSTVAEAITSTREGLDFFMSKGIMPRFTAWCPEPYTTLGTQAGPPLEYFCELLTVWKATF
EKYNLPIPPGYGEPGPGKAVFSVSAFMDVIGYSGRN
>Mature_436_residues
MEVTNSVRQISTISLLEEMEKKYKSIPIEAIVKQDILRQGIHFLKEVFEVTDPYKTKDYFIFSFDHIPLSELGDVKAPEE
IKVSGGHFDLLPTVISTRNNPSSPYKVKKSSDGKPVLYLGETFLGNLEFPPLPAWYRHKTKNGKIPGEIAPVIEWGYLIY
LTVFRNCQYFGKEEECAYCDINHNYRQQKNAGRPYTGVKDIEDILEVLSWIDSEDHTAKVYTITGGSVITSLKKKNEIDF
YLDYATAIESKFPGRWMGKIVSQAWEIEDCKKFKEAGIQVYHPNYEVWDKNLFQKICPGKEAYIGRDNWIRRVVDSAEVF
GPSYVIPNFVGGVELSKPYGFSTVAEAITSTREGLDFFMSKGIMPRFTAWCPEPYTTLGTQAGPPLEYFCELLTVWKATF
EKYNLPIPPGYGEPGPGKAVFSVSAFMDVIGYSGRN

Specific function: Unknown

COG id: COG2516

COG function: function code R; Biotin synthase-related enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49562; Mature: 49562

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVTNSVRQISTISLLEEMEKKYKSIPIEAIVKQDILRQGIHFLKEVFEVTDPYKTKDYF
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
IFSFDHIPLSELGDVKAPEEIKVSGGHFDLLPTVISTRNNPSSPYKVKKSSDGKPVLYLG
EEEECCCCHHHCCCCCCCCEEEECCCCEEHHHHHHHCCCCCCCCEEEECCCCCCEEEEEC
ETFLGNLEFPPLPAWYRHKTKNGKIPGEIAPVIEWGYLIYLTVFRNCQYFGKEEECAYCD
HHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
INHNYRQQKNAGRPYTGVKDIEDILEVLSWIDSEDHTAKVYTITGGSVITSLKKKNEIDF
CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHCCCCEE
YLDYATAIESKFPGRWMGKIVSQAWEIEDCKKFKEAGIQVYHPNYEVWDKNLFQKICPGK
EEEHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCC
EAYIGRDNWIRRVVDSAEVFGPSYVIPNFVGGVELSKPYGFSTVAEAITSTREGLDFFMS
CEEECCHHHHHHHHHHHHHCCCCCCCCHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHH
KGIMPRFTAWCPEPYTTLGTQAGPPLEYFCELLTVWKATFEKYNLPIPPGYGEPGPGKAV
CCCCCHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
FSVSAFMDVIGYSGRN
HHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEVTNSVRQISTISLLEEMEKKYKSIPIEAIVKQDILRQGIHFLKEVFEVTDPYKTKDYF
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
IFSFDHIPLSELGDVKAPEEIKVSGGHFDLLPTVISTRNNPSSPYKVKKSSDGKPVLYLG
EEEECCCCHHHCCCCCCCCEEEECCCCEEHHHHHHHCCCCCCCCEEEECCCCCCEEEEEC
ETFLGNLEFPPLPAWYRHKTKNGKIPGEIAPVIEWGYLIYLTVFRNCQYFGKEEECAYCD
HHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
INHNYRQQKNAGRPYTGVKDIEDILEVLSWIDSEDHTAKVYTITGGSVITSLKKKNEIDF
CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHCCCCEE
YLDYATAIESKFPGRWMGKIVSQAWEIEDCKKFKEAGIQVYHPNYEVWDKNLFQKICPGK
EEEHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCC
EAYIGRDNWIRRVVDSAEVFGPSYVIPNFVGGVELSKPYGFSTVAEAITSTREGLDFFMS
CEEECCHHHHHHHHHHHHHCCCCCCCCHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHH
KGIMPRFTAWCPEPYTTLGTQAGPPLEYFCELLTVWKATFEKYNLPIPPGYGEPGPGKAV
CCCCCHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
FSVSAFMDVIGYSGRN
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA