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The map label for this gene is 45657273

Identifier: 45657273

GI number: 45657273

Start: 1714747

End: 1715667

Strand: Reverse

Name: 45657273

Synonym: LIC11396

Alternate gene names: NA

Gene position: 1715667-1714747 (Counterclockwise)

Preceding gene: 45657274

Following gene: 45657268

Centisome position: 40.11

GC content: 32.57

Gene sequence:

>921_bases
ATGAAAAAGATTTTTGCTCAGATCAGTAGATATTTACTCTTCTTTATACCTCTACATTCTCTTTTACTATTGACTACTTC
CTTTTCAGAAGAATTATACAATCTGCAGTATCATCCTACCGACTCATTAGATTGGGTAATATTAATATACTTAGTTCCAG
CGATTGCGGCCGCATTCTTAATGCGGCTGATCCCTTATACTTATTTTGATACAACCAAACATAGGATTATCACCGTTGTA
TATTTATCAATCGGTATCATGATTTTATTTTGGAGTCAATCTCATTGGGGTTATTTTCTTTCGCGTCCATCAATCCCAAA
TTCAATTAAAAAAGTAAAACGATTGGTATCTGAATTGTCACTTGAACCAAATATCTTTCCCGCCTGTAATCTGAAATCGA
AAGATCGTGACTGGCAACTTACCAGTTCAAAACGATTTGATTACGATACCACACAAGATAGAATCGAATACTTTTTAGAC
AATATTTCCATAAGCCTCAATCAGGAGGAAACAAATTGGCGCAAAGCCTTAAATAAAACTTCATTTCGTTTGAACATTTC
CAAGGGTATCAAGATTCACGATTTCATTCAAAAAAATTATACCTTTGAGAAACCGGAAGCTGGATATAACCGAGTATGTC
CTTTTAGTGCAGTAGATATATTTGAATTTATAGATTTTGATGGGAATAAAATCTACTATGTAAGTTATTCCACAAACCAA
CTATCAAACGACCACTATGCGTATTACGAATTTATAATTTACAAAAACGAAAATGGTTATCAAATTAAACAATCCAATCG
TTTTTTTTACGATGTAGCCGGAATCGAAGGTTTAGAGTTTCCTTATTTTATGCTTCTATTCAACATTCTTTATATATCTT
TCTCAGGATCTATAGCCGCAATTCATAAAAGTAAAGTTTAA

Upstream 100 bases:

>100_bases
TAGCAAGTTTTACAATCCTAAACGTTTTTAATTTACTTTGTATGATCACTTATTCTTTTTTAATTGTGTCTTTATCGGAA
AATTAAATTTCATCTAAATT

Downstream 100 bases:

>100_bases
GTATTTCAAGTTTTCATAAACTAGCGTAAATTTTGCGTAAGAAAATCCGGGCGAATCCCTCCAATAGTTTGTAAAAGAAA
GATTCAATGAAACAGGCGGG

Product: cytoplasmic membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKKIFAQISRYLLFFIPLHSLLLLTTSFSEELYNLQYHPTDSLDWVILIYLVPAIAAAFLMRLIPYTYFDTTKHRIITVV
YLSIGIMILFWSQSHWGYFLSRPSIPNSIKKVKRLVSELSLEPNIFPACNLKSKDRDWQLTSSKRFDYDTTQDRIEYFLD
NISISLNQEETNWRKALNKTSFRLNISKGIKIHDFIQKNYTFEKPEAGYNRVCPFSAVDIFEFIDFDGNKIYYVSYSTNQ
LSNDHYAYYEFIIYKNENGYQIKQSNRFFYDVAGIEGLEFPYFMLLFNILYISFSGSIAAIHKSKV

Sequences:

>Translated_306_residues
MKKIFAQISRYLLFFIPLHSLLLLTTSFSEELYNLQYHPTDSLDWVILIYLVPAIAAAFLMRLIPYTYFDTTKHRIITVV
YLSIGIMILFWSQSHWGYFLSRPSIPNSIKKVKRLVSELSLEPNIFPACNLKSKDRDWQLTSSKRFDYDTTQDRIEYFLD
NISISLNQEETNWRKALNKTSFRLNISKGIKIHDFIQKNYTFEKPEAGYNRVCPFSAVDIFEFIDFDGNKIYYVSYSTNQ
LSNDHYAYYEFIIYKNENGYQIKQSNRFFYDVAGIEGLEFPYFMLLFNILYISFSGSIAAIHKSKV
>Mature_306_residues
MKKIFAQISRYLLFFIPLHSLLLLTTSFSEELYNLQYHPTDSLDWVILIYLVPAIAAAFLMRLIPYTYFDTTKHRIITVV
YLSIGIMILFWSQSHWGYFLSRPSIPNSIKKVKRLVSELSLEPNIFPACNLKSKDRDWQLTSSKRFDYDTTQDRIEYFLD
NISISLNQEETNWRKALNKTSFRLNISKGIKIHDFIQKNYTFEKPEAGYNRVCPFSAVDIFEFIDFDGNKIYYVSYSTNQ
LSNDHYAYYEFIIYKNENGYQIKQSNRFFYDVAGIEGLEFPYFMLLFNILYISFSGSIAAIHKSKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36159; Mature: 36159

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFAQISRYLLFFIPLHSLLLLTTSFSEELYNLQYHPTDSLDWVILIYLVPAIAAAFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHHHHHH
MRLIPYTYFDTTKHRIITVVYLSIGIMILFWSQSHWGYFLSRPSIPNSIKKVKRLVSELS
HHHHCHHHCCCCCHHHHHHHHHHHCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHC
LEPNIFPACNLKSKDRDWQLTSSKRFDYDTTQDRIEYFLDNISISLNQEETNWRKALNKT
CCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHCCC
SFRLNISKGIKIHDFIQKNYTFEKPEAGYNRVCPFSAVDIFEFIDFDGNKIYYVSYSTNQ
EEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCC
LSNDHYAYYEFIIYKNENGYQIKQSNRFFYDVAGIEGLEFPYFMLLFNILYISFSGSIAA
CCCCCEEEEEEEEEECCCCEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHEECCCEEE
IHKSKV
EECCCC
>Mature Secondary Structure
MKKIFAQISRYLLFFIPLHSLLLLTTSFSEELYNLQYHPTDSLDWVILIYLVPAIAAAFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHHHHHH
MRLIPYTYFDTTKHRIITVVYLSIGIMILFWSQSHWGYFLSRPSIPNSIKKVKRLVSELS
HHHHCHHHCCCCCHHHHHHHHHHHCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHC
LEPNIFPACNLKSKDRDWQLTSSKRFDYDTTQDRIEYFLDNISISLNQEETNWRKALNKT
CCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHCCC
SFRLNISKGIKIHDFIQKNYTFEKPEAGYNRVCPFSAVDIFEFIDFDGNKIYYVSYSTNQ
EEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCC
LSNDHYAYYEFIIYKNENGYQIKQSNRFFYDVAGIEGLEFPYFMLLFNILYISFSGSIAA
CCCCCEEEEEEEEEECCCCEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHEECCCEEE
IHKSKV
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA