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The map label for this gene is fadF [H]

Identifier: 45657174

GI number: 45657174

Start: 1597982

End: 1600081

Strand: Reverse

Name: fadF [H]

Synonym: LIC11294

Alternate gene names: 45657174

Gene position: 1600081-1597982 (Counterclockwise)

Preceding gene: 45657180

Following gene: 45657168

Centisome position: 37.41

GC content: 40.57

Gene sequence:

>2100_bases
TTGATCCATATGGCAATTTCACAAATCGCCTTTCATTTCATTTTCACAGTCTTATTCGTAATTGCGAATGTAGTTTTTAT
TCGTGCGATTTTATATCGCCTCCGGTTGATTTTCAGCGCCAGAAAAGCGGCCGGAACCGAAAACTTTTTGGAAAATCCGA
ACTGGATCTTCCGAATCAACAGTTTTATTCAAAACGTGATTCTTCAAAAAAAGAATTTTAAAGAACCTCTGCGAGGAATC
ATGCATGCGTTTATCTTTTACGGTTTTGTAGTTTATACAATCCACACAACGAGCCAGATGATCGCAGGTCTTATCGGATA
CGGTATGGACGATCCTTATAAATTTTCCTTAGTCGGTTTTTTATTGGGAGAAAGCGCAGGACATACTTATGAGTCCATCG
TTCAAGTCGTTTCAATTTTAGTATTGATCGGTTTAGGTTTTTTTGCTTGGAGAAGATGGATTCAAAAAGCCAAAGGATTA
GATGTTCATTCTCCAGCATCCGCGATCGTGATCGGGATGATTTCTATTCTGATGATCTCTACCCTTTTAGGAGAAGGCGC
CAAGTCTGTAGGAGCTGTTTATGACAGTCCAACGGAAAACGCCTCTTTCTTAGCTGCCGGGATCGGTTCTATTTGGAGAT
CGATCGGTGTAGAATATTCTACGGCAGATATAGTTTTTCAGATTATGTGGTGGGTTCACATCCTTTCCGTGTTCTCTTTT
ATGCTTTATGTTCCTACCTCGAAACATGCACACTTAATTTTTGCTCCTTTTAACTACTTTCTTCAATCGGACACTCCTAA
AGGTGCCCTTTCCAAACTCAATTTAGAAGATGAGAATGTAGTCTGGGGAGTAAATCGTGTAGAAGATTTTCCTTGGCCCA
ATCTTTTAGATGGAATGTCTTGTATCGAATGTGGTCGTTGCCAAGTACAATGTCCTGCCAATAGAACCGGAAAAGTTTTA
AATCCAAAAGCAATCATCGCTGATCTCAAACACGCTCTTCTGGATAAAATGCCTGAGGTTGCCAAAATCAGAACAGAAGA
AACGGATGCAGCAGTTGCAGCCGAAAAAGTAGCCGCGTTAGATACCGCTGTAATCAACTCCTACGAAGGTCTTTCCGAAG
AAGCTCTTTGGGGTTGTACTACTTGTTATGCTTGTGTAGAAGCTTGCCCTGTTGGAAACAACCAAGTCAATGCAATCATG
GAGATGAGAAGACATTTGGTTCTTGCAGAATCCAAATTCCCTGCAGAACTTCAAAACGCATTCGTAAATATGGAAAACAA
TTCCAATCCTTGGGGTGTGGGAGCTCATACAAGAGCAGATTGGGCGGAAGGTCTAGGTGTAAAAACCATGGCTGAAGACT
CCAACGTAGACGTTCTTTACTGGGTAGGATGTGCTGGCGCTTTTGATGATAGAAACAAAAACATTGCTAAGTCTTTTGTA
AAAATTCTACAAAAAGCAGACGTTAAGTTTGGTATTCTCGGAACCGAAGAGAATTGTTCCGGTGATTCCGCAAGAAGAGG
TGGTAACGAATATCTCTACCAAACTTTGGCACAAGCAAACGTAGATACGATGAACGGATATAATGTGAAAAAAGTAGTAA
CCGCTTGTCCGCATTGCTATAACACAATTAAAAACGAATATCCTCAATTTGGAGGAAATTTCGAAGTGGTCCATCACTCA
GAATTTATCAATCAACTTGTAAAAGAGAAAAAACTGGACGTTAAAACCGCTGAAGATGCTTCTTCCGGCAAATATACTTA
TCACGATTCTTGCTACATTGGTCGCTACAATGATAACTACGAAAATCCTAGAGATGTAGTTAAAAAAGTTTCCGGTGGAA
AACTGGCGGAACCTTCCGATCATCATACAAAAGGTCTTTGTTGTGGTGCAGGTGGGGCTCAGATGTGGATGGAAGAACAA
AATAACGACAGAGTGAACATCAAAAGAACCAAACAACTTTTAGATACGGGAGCGACTACAATCGCAACTGCTTGTCCTTT
TTGCGTGACTATGATTACCGACGGCGTAAAACACGAAGGGAAAATTGAAGAGGTAAAGGTAAAAGACATAGCAGAGTTAG
TTGCAGATAACTTACAATAG

Upstream 100 bases:

>100_bases
GAATCATAACAGACCAAGAACCTTACTTTGAAAATTCCTCGACAGGTAGGTTCTCCATTCCTACGCTGTAATTCATTCAT
CAATCCAAAAGAAAGGGTAC

Downstream 100 bases:

>100_bases
TAAATTCTAATTTACTAAAATATACCGTCAAAACTTTTTGGTGGTAAAAAATCTGATCAAAAAGCCGGTCTCCCATAGCC
GGCTTTTTAATATTCTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 699; Mature: 699

Protein sequence:

>699_residues
MIHMAISQIAFHFIFTVLFVIANVVFIRAILYRLRLIFSARKAAGTENFLENPNWIFRINSFIQNVILQKKNFKEPLRGI
MHAFIFYGFVVYTIHTTSQMIAGLIGYGMDDPYKFSLVGFLLGESAGHTYESIVQVVSILVLIGLGFFAWRRWIQKAKGL
DVHSPASAIVIGMISILMISTLLGEGAKSVGAVYDSPTENASFLAAGIGSIWRSIGVEYSTADIVFQIMWWVHILSVFSF
MLYVPTSKHAHLIFAPFNYFLQSDTPKGALSKLNLEDENVVWGVNRVEDFPWPNLLDGMSCIECGRCQVQCPANRTGKVL
NPKAIIADLKHALLDKMPEVAKIRTEETDAAVAAEKVAALDTAVINSYEGLSEEALWGCTTCYACVEACPVGNNQVNAIM
EMRRHLVLAESKFPAELQNAFVNMENNSNPWGVGAHTRADWAEGLGVKTMAEDSNVDVLYWVGCAGAFDDRNKNIAKSFV
KILQKADVKFGILGTEENCSGDSARRGGNEYLYQTLAQANVDTMNGYNVKKVVTACPHCYNTIKNEYPQFGGNFEVVHHS
EFINQLVKEKKLDVKTAEDASSGKYTYHDSCYIGRYNDNYENPRDVVKKVSGGKLAEPSDHHTKGLCCGAGGAQMWMEEQ
NNDRVNIKRTKQLLDTGATTIATACPFCVTMITDGVKHEGKIEEVKVKDIAELVADNLQ

Sequences:

>Translated_699_residues
MIHMAISQIAFHFIFTVLFVIANVVFIRAILYRLRLIFSARKAAGTENFLENPNWIFRINSFIQNVILQKKNFKEPLRGI
MHAFIFYGFVVYTIHTTSQMIAGLIGYGMDDPYKFSLVGFLLGESAGHTYESIVQVVSILVLIGLGFFAWRRWIQKAKGL
DVHSPASAIVIGMISILMISTLLGEGAKSVGAVYDSPTENASFLAAGIGSIWRSIGVEYSTADIVFQIMWWVHILSVFSF
MLYVPTSKHAHLIFAPFNYFLQSDTPKGALSKLNLEDENVVWGVNRVEDFPWPNLLDGMSCIECGRCQVQCPANRTGKVL
NPKAIIADLKHALLDKMPEVAKIRTEETDAAVAAEKVAALDTAVINSYEGLSEEALWGCTTCYACVEACPVGNNQVNAIM
EMRRHLVLAESKFPAELQNAFVNMENNSNPWGVGAHTRADWAEGLGVKTMAEDSNVDVLYWVGCAGAFDDRNKNIAKSFV
KILQKADVKFGILGTEENCSGDSARRGGNEYLYQTLAQANVDTMNGYNVKKVVTACPHCYNTIKNEYPQFGGNFEVVHHS
EFINQLVKEKKLDVKTAEDASSGKYTYHDSCYIGRYNDNYENPRDVVKKVSGGKLAEPSDHHTKGLCCGAGGAQMWMEEQ
NNDRVNIKRTKQLLDTGATTIATACPFCVTMITDGVKHEGKIEEVKVKDIAELVADNLQ
>Mature_699_residues
MIHMAISQIAFHFIFTVLFVIANVVFIRAILYRLRLIFSARKAAGTENFLENPNWIFRINSFIQNVILQKKNFKEPLRGI
MHAFIFYGFVVYTIHTTSQMIAGLIGYGMDDPYKFSLVGFLLGESAGHTYESIVQVVSILVLIGLGFFAWRRWIQKAKGL
DVHSPASAIVIGMISILMISTLLGEGAKSVGAVYDSPTENASFLAAGIGSIWRSIGVEYSTADIVFQIMWWVHILSVFSF
MLYVPTSKHAHLIFAPFNYFLQSDTPKGALSKLNLEDENVVWGVNRVEDFPWPNLLDGMSCIECGRCQVQCPANRTGKVL
NPKAIIADLKHALLDKMPEVAKIRTEETDAAVAAEKVAALDTAVINSYEGLSEEALWGCTTCYACVEACPVGNNQVNAIM
EMRRHLVLAESKFPAELQNAFVNMENNSNPWGVGAHTRADWAEGLGVKTMAEDSNVDVLYWVGCAGAFDDRNKNIAKSFV
KILQKADVKFGILGTEENCSGDSARRGGNEYLYQTLAQANVDTMNGYNVKKVVTACPHCYNTIKNEYPQFGGNFEVVHHS
EFINQLVKEKKLDVKTAEDASSGKYTYHDSCYIGRYNDNYENPRDVVKKVSGGKLAEPSDHHTKGLCCGAGGAQMWMEEQ
NNDRVNIKRTKQLLDTGATTIATACPFCVTMITDGVKHEGKIEEVKVKDIAELVADNLQ

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 77519; Mature: 77519

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHMAISQIAFHFIFTVLFVIANVVFIRAILYRLRLIFSARKAAGTENFLENPNWIFRIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEHH
SFIQNVILQKKNFKEPLRGIMHAFIFYGFVVYTIHTTSQMIAGLIGYGMDDPYKFSLVGF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LLGESAGHTYESIVQVVSILVLIGLGFFAWRRWIQKAKGLDVHSPASAIVIGMISILMIS
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
TLLGEGAKSVGAVYDSPTENASFLAAGIGSIWRSIGVEYSTADIVFQIMWWVHILSVFSF
HHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
MLYVPTSKHAHLIFAPFNYFLQSDTPKGALSKLNLEDENVVWGVNRVEDFPWPNLLDGMS
HHHCCCCCCCEEEEECHHHHHCCCCCCHHHHCCCCCCCCEEEECHHHCCCCCCCHHCCHH
CIECGRCQVQCPANRTGKVLNPKAIIADLKHALLDKMPEVAKIRTEETDAAVAAEKVAAL
HHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHH
DTAVINSYEGLSEEALWGCTTCYACVEACPVGNNQVNAIMEMRRHLVLAESKFPAELQNA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
FVNMENNSNPWGVGAHTRADWAEGLGVKTMAEDSNVDVLYWVGCAGAFDDRNKNIAKSFV
EEECCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHH
KILQKADVKFGILGTEENCSGDSARRGGNEYLYQTLAQANVDTMNGYNVKKVVTACPHCY
HHHHHCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHH
NTIKNEYPQFGGNFEVVHHSEFINQLVKEKKLDVKTAEDASSGKYTYHDSCYIGRYNDNY
HHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCCCC
ENPRDVVKKVSGGKLAEPSDHHTKGLCCGAGGAQMWMEEQNNDRVNIKRTKQLLDTGATT
CCHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHCCCCCEEEHHHHHHHHHCCCHH
IATACPFCVTMITDGVKHEGKIEEVKVKDIAELVADNLQ
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIHMAISQIAFHFIFTVLFVIANVVFIRAILYRLRLIFSARKAAGTENFLENPNWIFRIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEHH
SFIQNVILQKKNFKEPLRGIMHAFIFYGFVVYTIHTTSQMIAGLIGYGMDDPYKFSLVGF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LLGESAGHTYESIVQVVSILVLIGLGFFAWRRWIQKAKGLDVHSPASAIVIGMISILMIS
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
TLLGEGAKSVGAVYDSPTENASFLAAGIGSIWRSIGVEYSTADIVFQIMWWVHILSVFSF
HHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
MLYVPTSKHAHLIFAPFNYFLQSDTPKGALSKLNLEDENVVWGVNRVEDFPWPNLLDGMS
HHHCCCCCCCEEEEECHHHHHCCCCCCHHHHCCCCCCCCEEEECHHHCCCCCCCHHCCHH
CIECGRCQVQCPANRTGKVLNPKAIIADLKHALLDKMPEVAKIRTEETDAAVAAEKVAAL
HHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHH
DTAVINSYEGLSEEALWGCTTCYACVEACPVGNNQVNAIMEMRRHLVLAESKFPAELQNA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
FVNMENNSNPWGVGAHTRADWAEGLGVKTMAEDSNVDVLYWVGCAGAFDDRNKNIAKSFV
EEECCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHH
KILQKADVKFGILGTEENCSGDSARRGGNEYLYQTLAQANVDTMNGYNVKKVVTACPHCY
HHHHHCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHH
NTIKNEYPQFGGNFEVVHHSEFINQLVKEKKLDVKTAEDASSGKYTYHDSCYIGRYNDNY
HHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCCCC
ENPRDVVKKVSGGKLAEPSDHHTKGLCCGAGGAQMWMEEQNNDRVNIKRTKQLLDTGATT
CCHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHCCCCCEEEHHHHHHHHHCCCHH
IATACPFCVTMITDGVKHEGKIEEVKVKDIAELVADNLQ
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]