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The map label for this gene is ywnA [H]

Identifier: 45657165

GI number: 45657165

Start: 1583910

End: 1584329

Strand: Reverse

Name: ywnA [H]

Synonym: LIC11283

Alternate gene names: 45657165

Gene position: 1584329-1583910 (Counterclockwise)

Preceding gene: 45657166

Following gene: 45657157

Centisome position: 37.04

GC content: 36.9

Gene sequence:

>420_bases
ATGACAAGTCGATTTACGGTTGCAATCCACATTCTTTCCCTACTCTCTTTAGGAGAAGGTAAAACTAAAACTTCCGAAGA
ACTTGCGGAAAGTGTGAACACAAATCCAGTTGTGATCCGCAAAATTCTATCACTTTTAAAAAATCAAGGAATTGTACGAA
ATCAGATGGGACCAAACGGCGGTTACGTTCTTGCAAAAACTCCGGCGTCTATCAATCTGAAAGAAATCTACGAAGCAATC
GACGAAAAGATCTTTCAGATGCATTCTAAATCCCCGAATAAGAAATGTATCTGCGGTCACGCAATCCAACCGATCCTTTC
TAAAGTGTATGAAAAAGCACAAAAAGTTTTAGAAGAGGAGTTAGGTTCTACAGATCTAGACTCAATTACAAAAGAAATTC
TTAATTTTTCCAAAAAATAA

Upstream 100 bases:

>100_bases
CCAAATCAAATATCCTTAAAAACATATTTAACTAGAAAGATAGCTTTGACTTGACACGAACACTCGTTTTCTATATTCTG
TAACTGGATGCCTTACAGAT

Downstream 100 bases:

>100_bases
CAATAGAAATCATAAGTTTTTATTTCTTTGAAATGGGTTTAATATAAAAACAAATCGTAAACACTCTAGACAAATCGTTT
AAAAGATATATAATAATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MTSRFTVAIHILSLLSLGEGKTKTSEELAESVNTNPVVIRKILSLLKNQGIVRNQMGPNGGYVLAKTPASINLKEIYEAI
DEKIFQMHSKSPNKKCICGHAIQPILSKVYEKAQKVLEEELGSTDLDSITKEILNFSKK

Sequences:

>Translated_139_residues
MTSRFTVAIHILSLLSLGEGKTKTSEELAESVNTNPVVIRKILSLLKNQGIVRNQMGPNGGYVLAKTPASINLKEIYEAI
DEKIFQMHSKSPNKKCICGHAIQPILSKVYEKAQKVLEEELGSTDLDSITKEILNFSKK
>Mature_138_residues
TSRFTVAIHILSLLSLGEGKTKTSEELAESVNTNPVVIRKILSLLKNQGIVRNQMGPNGGYVLAKTPASINLKEIYEAID
EKIFQMHSKSPNKKCICGHAIQPILSKVYEKAQKVLEEELGSTDLDSITKEILNFSKK

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15383; Mature: 15252

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRFTVAIHILSLLSLGEGKTKTSEELAESVNTNPVVIRKILSLLKNQGIVRNQMGPNG
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHCCCCCCC
GYVLAKTPASINLKEIYEAIDEKIFQMHSKSPNKKCICGHAIQPILSKVYEKAQKVLEEE
CEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGSTDLDSITKEILNFSKK
CCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSRFTVAIHILSLLSLGEGKTKTSEELAESVNTNPVVIRKILSLLKNQGIVRNQMGPNG
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHCCCCCCC
GYVLAKTPASINLKEIYEAIDEKIFQMHSKSPNKKCICGHAIQPILSKVYEKAQKVLEEE
CEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGSTDLDSITKEILNFSKK
CCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]