Click here to switch to the map view.

The map label for this gene is 45657154

Identifier: 45657154

GI number: 45657154

Start: 1571527

End: 1572345

Strand: Reverse

Name: 45657154

Synonym: LIC11271

Alternate gene names: NA

Gene position: 1572345-1571527 (Counterclockwise)

Preceding gene: 45657155

Following gene: 45657153

Centisome position: 36.76

GC content: 40.54

Gene sequence:

>819_bases
ATGTTTTCCCGGTGTCGAATTTTCTTAAAACCTACGACCCTAATTTGGTTTGCAATTCTTCCGGGAGCCTTATCTGCTTC
TCCTCAAAAACCAGGAACCTTCGAATTGTTAGGTGGTTACCAACCCAATTGGAATCGACTTTTCACTGAGTTTCTTCCGA
AACGTACAGCACAAACTGGTAACCTACCTTCTAGCGGCGTCATTTCCAGAGAAGAAGAGGACATAGAAAATCCAGAGGAA
ACAGAAGAAGATAAACAAGAAGGATACCAAGACAATCGAAAAACGGAAGTTGGAGTTTGGGTAGGAGCTTCCAATCCGTT
ACCCGGAACCGAAACTCAAAAATATCTGGATACTACGTTAGGTGGCGGTTTCTTTTTTAGAATTCCCTGGCCTTGGATCT
TTTATCTCGAAATGGGAGCCTTTTACGCAAATTATCTTTCGGCAACAGAAAGAGCTTTGACTACAATTCCGGTCTATCTT
GCTTTGGGTTATAAAATTCCTTTAGATCTTCCAATTTCGTTTATCCTTCGTGCGGGAGGTGGAGAAGCGTTTGTAGTAGC
AAGACCTTCCAACACATCTCGTTGGGATCCAATGATGATTGTAGGATTAGAAACTAGTTTTGTAGCTGGAAAAAAAATCC
GAATCGGAATTCGAATCGATTACAATAAAATTTATGAGTCTCGTATGGACGCCCCAGGAGAAACAAAATATCCTTACACG
AGTCCTTACGAAGATTCCAGATTGAGTAACCCCAATTATTACAGAGTAGTAGATACTGAATTTTTTCAGTTCGGTTTGAT
GGTGAGTGTATTTTTATGA

Upstream 100 bases:

>100_bases
TCACCCTTCCTCCTTACGGACTTTATTTTATCAGGGCTTATTACGATTCTTACCCTAAAATCGATTTTATGTATTCTCAT
CTGGATTTTCTAAAATAATC

Downstream 100 bases:

>100_bases
AACGATCTTATTTACGGTTCTTCTTGATACTTTCGTGTTTTCTAATGTTCTTTTGTAAAGTAGGCGACTGGCATGGAAAA
CATTCTAAAAATCCAGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MFSRCRIFLKPTTLIWFAILPGALSASPQKPGTFELLGGYQPNWNRLFTEFLPKRTAQTGNLPSSGVISREEEDIENPEE
TEEDKQEGYQDNRKTEVGVWVGASNPLPGTETQKYLDTTLGGGFFFRIPWPWIFYLEMGAFYANYLSATERALTTIPVYL
ALGYKIPLDLPISFILRAGGGEAFVVARPSNTSRWDPMMIVGLETSFVAGKKIRIGIRIDYNKIYESRMDAPGETKYPYT
SPYEDSRLSNPNYYRVVDTEFFQFGLMVSVFL

Sequences:

>Translated_272_residues
MFSRCRIFLKPTTLIWFAILPGALSASPQKPGTFELLGGYQPNWNRLFTEFLPKRTAQTGNLPSSGVISREEEDIENPEE
TEEDKQEGYQDNRKTEVGVWVGASNPLPGTETQKYLDTTLGGGFFFRIPWPWIFYLEMGAFYANYLSATERALTTIPVYL
ALGYKIPLDLPISFILRAGGGEAFVVARPSNTSRWDPMMIVGLETSFVAGKKIRIGIRIDYNKIYESRMDAPGETKYPYT
SPYEDSRLSNPNYYRVVDTEFFQFGLMVSVFL
>Mature_272_residues
MFSRCRIFLKPTTLIWFAILPGALSASPQKPGTFELLGGYQPNWNRLFTEFLPKRTAQTGNLPSSGVISREEEDIENPEE
TEEDKQEGYQDNRKTEVGVWVGASNPLPGTETQKYLDTTLGGGFFFRIPWPWIFYLEMGAFYANYLSATERALTTIPVYL
ALGYKIPLDLPISFILRAGGGEAFVVARPSNTSRWDPMMIVGLETSFVAGKKIRIGIRIDYNKIYESRMDAPGETKYPYT
SPYEDSRLSNPNYYRVVDTEFFQFGLMVSVFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30894; Mature: 30894

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSRCRIFLKPTTLIWFAILPGALSASPQKPGTFELLGGYQPNWNRLFTEFLPKRTAQTG
CCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCC
NLPSSGVISREEEDIENPEETEEDKQEGYQDNRKTEVGVWVGASNPLPGTETQKYLDTTL
CCCCCCCCCCCHHHCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHC
GGGFFFRIPWPWIFYLEMGAFYANYLSATERALTTIPVYLALGYKIPLDLPISFILRAGG
CCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEEEECEECCCCCCEEEEEECCC
GEAFVVARPSNTSRWDPMMIVGLETSFVAGKKIRIGIRIDYNKIYESRMDAPGETKYPYT
CCEEEEECCCCCCCCCCEEEEEECCCEECCCEEEEEEEECHHHHHHHHCCCCCCCCCCCC
SPYEDSRLSNPNYYRVVDTEFFQFGLMVSVFL
CCCCCCCCCCCCEEEEECHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSRCRIFLKPTTLIWFAILPGALSASPQKPGTFELLGGYQPNWNRLFTEFLPKRTAQTG
CCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCC
NLPSSGVISREEEDIENPEETEEDKQEGYQDNRKTEVGVWVGASNPLPGTETQKYLDTTL
CCCCCCCCCCCHHHCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHC
GGGFFFRIPWPWIFYLEMGAFYANYLSATERALTTIPVYLALGYKIPLDLPISFILRAGG
CCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEEEECEECCCCCCEEEEEECCC
GEAFVVARPSNTSRWDPMMIVGLETSFVAGKKIRIGIRIDYNKIYESRMDAPGETKYPYT
CCEEEEECCCCCCCCCCEEEEEECCCEECCCEEEEEEEECHHHHHHHHCCCCCCCCCCCC
SPYEDSRLSNPNYYRVVDTEFFQFGLMVSVFL
CCCCCCCCCCCCEEEEECHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA