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The map label for this gene is ybcI [H]

Identifier: 45656983

GI number: 45656983

Start: 1355515

End: 1356066

Strand: Reverse

Name: ybcI [H]

Synonym: LIC11099

Alternate gene names: 45656983

Gene position: 1356066-1355515 (Counterclockwise)

Preceding gene: 45656986

Following gene: 45656982

Centisome position: 31.7

GC content: 39.67

Gene sequence:

>552_bases
ATGCCTACTATCATGACTCATACCGCGGTTCCAATTTCCATTTGGATCATGCTCGGAAAAAGAATCATTCCATTACGACT
TCTTATTGTTGGAATATTTTTTGCGATCTTACCAGATGTGGATGTGGTGACATTCAAATTCGGAATTCCTTACGAAAGCG
ATTGGGGGCATAGAGGATTTAGTCATTCGATTCTATTTGCATTCTCTCTTTCCGTTTTGGCGAGTATTCTGGTTCGATGG
TTTTGCGCAAGAATCGAAGTCGTATTTTCATTTTTATTTTTGTCGATTTTGTCCCACGGAGTTTTAGACGCGATGACAAG
CGGCGGACTTGGAATTGGTTTTTTCATTCCCTATTCCTCCAAACGATTTTTTTTCGATCAGAGACCGATCAGCGTTTCGC
CCATCGGGATCAAAAACTTTTTAACCGCAAGAGGACTAGAAGTCTTGCGATCTGAACTGTTTACGGTATGGATTCCGTTG
TTATCCATTGCAATTTCAATTTTTTTAATACGAATTCTAATTCGTCGGATTAACACACGCGCCAAATATTAA

Upstream 100 bases:

>100_bases
TGGATATTCTATTCTATAACTCTGAGTAAATCTCTCAATCAACTTGATTTCGTCTTAAAAAGATTGTTTAGAAATTAGAA
TCCTCTAAAATTAGCCAACC

Downstream 100 bases:

>100_bases
AAAAACAGAATCTACTCTGCCGGAGTTTCGACAAACTCAAGAAAAACGTTCAAACAATCCGCAAAACAACCATATCGTAG
GATAAAATACGATGGCGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MPTIMTHTAVPISIWIMLGKRIIPLRLLIVGIFFAILPDVDVVTFKFGIPYESDWGHRGFSHSILFAFSLSVLASILVRW
FCARIEVVFSFLFLSILSHGVLDAMTSGGLGIGFFIPYSSKRFFFDQRPISVSPIGIKNFLTARGLEVLRSELFTVWIPL
LSIAISIFLIRILIRRINTRAKY

Sequences:

>Translated_183_residues
MPTIMTHTAVPISIWIMLGKRIIPLRLLIVGIFFAILPDVDVVTFKFGIPYESDWGHRGFSHSILFAFSLSVLASILVRW
FCARIEVVFSFLFLSILSHGVLDAMTSGGLGIGFFIPYSSKRFFFDQRPISVSPIGIKNFLTARGLEVLRSELFTVWIPL
LSIAISIFLIRILIRRINTRAKY
>Mature_182_residues
PTIMTHTAVPISIWIMLGKRIIPLRLLIVGIFFAILPDVDVVTFKFGIPYESDWGHRGFSHSILFAFSLSVLASILVRWF
CARIEVVFSFLFLSILSHGVLDAMTSGGLGIGFFIPYSSKRFFFDQRPISVSPIGIKNFLTARGLEVLRSELFTVWIPLL
SIAISIFLIRILIRRINTRAKY

Specific function: Unknown

COG id: COG1988

COG function: function code R; Predicted membrane-bound metal-dependent hydrolases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786738, Length=160, Percent_Identity=46.875, Blast_Score=130, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007404 [H]

Pfam domain/function: PF04307 DUF457 [H]

EC number: NA

Molecular weight: Translated: 20753; Mature: 20622

Theoretical pI: Translated: 11.21; Mature: 11.21

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTIMTHTAVPISIWIMLGKRIIPLRLLIVGIFFAILPDVDVVTFKFGIPYESDWGHRGF
CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC
SHSILFAFSLSVLASILVRWFCARIEVVFSFLFLSILSHGVLDAMTSGGLGIGFFIPYSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
KRFFFDQRPISVSPIGIKNFLTARGLEVLRSELFTVWIPLLSIAISIFLIRILIRRINTR
CEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AKY
CCC
>Mature Secondary Structure 
PTIMTHTAVPISIWIMLGKRIIPLRLLIVGIFFAILPDVDVVTFKFGIPYESDWGHRGF
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC
SHSILFAFSLSVLASILVRWFCARIEVVFSFLFLSILSHGVLDAMTSGGLGIGFFIPYSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
KRFFFDQRPISVSPIGIKNFLTARGLEVLRSELFTVWIPLLSIAISIFLIRILIRRINTR
CEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AKY
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 7567469 [H]