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The map label for this gene is 45656980

Identifier: 45656980

GI number: 45656980

Start: 1352324

End: 1352638

Strand: Reverse

Name: 45656980

Synonym: LIC11096

Alternate gene names: NA

Gene position: 1352638-1352324 (Counterclockwise)

Preceding gene: 45656981

Following gene: 45656975

Centisome position: 31.62

GC content: 38.1

Gene sequence:

>315_bases
ATGAAAACCAAATCGGAGAATTTTATGAAACAATTTATCATCGTATTACGCTATCTCGTTTCAATCGAAACTGTAGATAA
ACACGTAACCGCACATAGGGAATATTTATCTCAAGGATACGAACAAAAAATATTACTCGCATCCGGACCACAAGAACCTA
GAACCGGGGGAATTTTCATTGCGAGAGCAAAGTCCCGCAATGAAATGGAATCCTTTTGTCGCCAAGATCCTTTTTATAGC
AACGGTGTCGCTGAATATCAGATCTTAGAATGGAACCCGGTAAAGTTCCAAAAAGAATTTGAATTTTGGCTTTAG

Upstream 100 bases:

>100_bases
TAAAGAACTTAAAAAAGTTGTATTTGCATAACAACCCACTTCTATCGGAAAAAATAGAAAGAATTCGAAAATTACTTCCC
CAATGTATTATTTATTTTGA

Downstream 100 bases:

>100_bases
ATCTTACCCAGTTCGTAGACGTCTACGGGCTCTTCTCTTCCTTTTACATGGATAGAAGAAAGATGTCTACCTGGAACCGT
ATCTTTAATATCGTCGTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: YCII-Related Protein; YCII-Related Domain-Containing Protein; GTP Cyclohydrolase II; YciL Domain-Containing Protein; Ycii-Related Protein; YCII-Related Domain Superfamily Protein; YCII-Related Domain Superfamily; Protein Conserved In Bacteria

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MKTKSENFMKQFIIVLRYLVSIETVDKHVTAHREYLSQGYEQKILLASGPQEPRTGGIFIARAKSRNEMESFCRQDPFYS
NGVAEYQILEWNPVKFQKEFEFWL

Sequences:

>Translated_104_residues
MKTKSENFMKQFIIVLRYLVSIETVDKHVTAHREYLSQGYEQKILLASGPQEPRTGGIFIARAKSRNEMESFCRQDPFYS
NGVAEYQILEWNPVKFQKEFEFWL
>Mature_104_residues
MKTKSENFMKQFIIVLRYLVSIETVDKHVTAHREYLSQGYEQKILLASGPQEPRTGGIFIARAKSRNEMESFCRQDPFYS
NGVAEYQILEWNPVKFQKEFEFWL

Specific function: Unknown

COG id: COG2350

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12343; Mature: 12343

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKSENFMKQFIIVLRYLVSIETVDKHVTAHREYLSQGYEQKILLASGPQEPRTGGIFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEE
ARAKSRNEMESFCRQDPFYSNGVAEYQILEWNPVKFQKEFEFWL
EECCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHCCCCCC
>Mature Secondary Structure
MKTKSENFMKQFIIVLRYLVSIETVDKHVTAHREYLSQGYEQKILLASGPQEPRTGGIFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEE
ARAKSRNEMESFCRQDPFYSNGVAEYQILEWNPVKFQKEFEFWL
EECCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA