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The map label for this gene is 45656974

Identifier: 45656974

GI number: 45656974

Start: 1345998

End: 1346435

Strand: Reverse

Name: 45656974

Synonym: LIC11090

Alternate gene names: NA

Gene position: 1346435-1345998 (Counterclockwise)

Preceding gene: 45656975

Following gene: 45656973

Centisome position: 31.48

GC content: 34.02

Gene sequence:

>438_bases
ATGAAATTTTCCGTTTCCATTTTTTTATCCGTTTCAATCCTATTTCAAACTTTGGTTTTTTCCAGCGGTCTTTTCGGCTG
TTTTCTTTCGGAACAATATAAACTCTGTGAATGCAATCACAGCAGTAAAATTCAAAAACACACAAACAAAGAGGATGTTC
TTTTTTCCCAAAAAATACGTTCTTTCAATCGATCCACTACTTCCAAAAAACTTCCTGATTGTCATTCCGCTCAATCGGGA
GAAGCCCATTCCTGTTCCTGTAAAAAATCTGAAAATAAACTTTCTCAGTTGGGCGCGTTTTATTCCACTTTTTTTTCCCA
AAAACAAGCTTCTTATATCCGGCATGATCTAGATATTATTCAAATTATTACTTTAGAATATTCTAACTCTGGAATCTTCT
CCTTTTCTTTTCTTTTAAAACCCCCTCGAATTTCCTAA

Upstream 100 bases:

>100_bases
AATTAATTTCTGAATTAAAAAAAGACCAAATTCAAGTTTCAGAAGTAAAACTGAGCGAAGGTCTACAACTTGTGTTTTCC
AAACTTAAAATCAATCTGGG

Downstream 100 bases:

>100_bases
CATCTTCCATTTCACAAAAATCTTTTCAGAAATTTACCTATAACGGCCGTTCATCGATTGTTTTTTCTTTGTCGTTCGTT
TAGTAGGAAACTTTAATACT

Product: putative lipoprotein

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MKFSVSIFLSVSILFQTLVFSSGLFGCFLSEQYKLCECNHSSKIQKHTNKEDVLFSQKIRSFNRSTTSKKLPDCHSAQSG
EAHSCSCKKSENKLSQLGAFYSTFFSQKQASYIRHDLDIIQIITLEYSNSGIFSFSFLLKPPRIS

Sequences:

>Translated_145_residues
MKFSVSIFLSVSILFQTLVFSSGLFGCFLSEQYKLCECNHSSKIQKHTNKEDVLFSQKIRSFNRSTTSKKLPDCHSAQSG
EAHSCSCKKSENKLSQLGAFYSTFFSQKQASYIRHDLDIIQIITLEYSNSGIFSFSFLLKPPRIS
>Mature_145_residues
MKFSVSIFLSVSILFQTLVFSSGLFGCFLSEQYKLCECNHSSKIQKHTNKEDVLFSQKIRSFNRSTTSKKLPDCHSAQSG
EAHSCSCKKSENKLSQLGAFYSTFFSQKQASYIRHDLDIIQIITLEYSNSGIFSFSFLLKPPRIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16461; Mature: 16461

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSVSIFLSVSILFQTLVFSSGLFGCFLSEQYKLCECNHSSKIQKHTNKEDVLFSQKIR
CCEEHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEECCCCCCHHHHCCCHHHHHHHHHHH
SFNRSTTSKKLPDCHSAQSGEAHSCSCKKSENKLSQLGAFYSTFFSQKQASYIRHDLDII
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
QIITLEYSNSGIFSFSFLLKPPRIS
EEEEEEECCCCEEEEEEEECCCCCC
>Mature Secondary Structure
MKFSVSIFLSVSILFQTLVFSSGLFGCFLSEQYKLCECNHSSKIQKHTNKEDVLFSQKIR
CCEEHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEECCCCCCHHHHCCCHHHHHHHHHHH
SFNRSTTSKKLPDCHSAQSGEAHSCSCKKSENKLSQLGAFYSTFFSQKQASYIRHDLDII
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
QIITLEYSNSGIFSFSFLLKPPRIS
EEEEEEECCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA