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The map label for this gene is 45656964

Identifier: 45656964

GI number: 45656964

Start: 1333110

End: 1335584

Strand: Reverse

Name: 45656964

Synonym: LIC11080

Alternate gene names: NA

Gene position: 1335584-1333110 (Counterclockwise)

Preceding gene: 45656965

Following gene: 45656963

Centisome position: 31.23

GC content: 33.37

Gene sequence:

>2475_bases
ATGTCTTTTCGAATTTATATTCTTTTTTTATTTGAATATTTCCGAAATCATAAGTTAGGAACATTTTTCGCGTTATCCGG
AATATCATTGGGAGTGGGACTTTTCATTTCTACTACCGCAAACGGGATCAAGGCAGAAAAAAGCCTGACCGATTTTGCAA
TGGGATACTTTCAAGGAGAATACAAGATTAAAATATCTTCTTCTCTCGGGGATCAAAATCTTCCTGTTTCTCTTATTCGA
GAATTATCCGAAGACACTAACCTAACTTGGATTAAAAAAATTGTTCCTCGATTTCAAAAGGAAATCATCGTAAATGATTC
TGTCCGAGCCGTTTACATTGGTTTAGATTTTTTAAAAGAATCGGGTAATTTACGATATAAACCCGATGCAGAACATGTAG
AATCTTTAATATTCATAAGCAGTTCACTTTCTAAAAAAATAGACATTTCTAAGATAAACATACGTGCAGATTCCAGAAAA
TTCACCCTCGCCAAACCTGTAGTTTTAGAAACAGAAGGCGGTAGCATTCTTATGGAAGACATTGAATCCGCGATGGAAAG
ATTCGATTTAAAAGAACACGTTAGTTTTCTTTTGATACAGCCAAACGAGTTCAGATCGGAGCAAAAAAAAATCTTAGAAC
AAAAATTAGGTCCCGATTACAGAGTAGAAACAGTAGAAGATATTCAAGAAAAATCTTCGAACGCATTACGCTCCTTTCAA
CTCAATCTATTAGTAATTTCTTTTATTTCCCTTGTTATAGCTCTTTTTATGGTTTCAAACACTATGTCCGGTTTATACTT
TAGCCGCGAAAAAGAACTAGGCATTTTAAAAACCATGGGACTTAACGCGAAACAAACCTTTTCGCTCTTTATATCTCAGG
CACTACTTTTAGGAAGTGTGGGAAGTTTGTTAGGATTAGGATTGGGTTTACTTTTTTCAAGACTTGAATTTTTTAGTCCG
GAAACAACTTCTGCAGATCTTTCGTATCTAAATACTTATCAATCTCTACCCTTCTCCGCTTGGTTTTTAGGTTTGGGGAT
CGGAATCATCGGTTCTTTTTTATCCGCAGCACTTCCTTCTTTTAGAGCTGGAAAAATTTCTCCCGTTTCTATATTGAAAG
AAGCCACTTCGCAAACTTCCCCCGTAAACGAATTTCGTTTATTATCAATAGGAATTTTTTCTATTTTCATCTTTGTAATC
GTAGCCTTTCTTCCTTTACGTTGGAAATTTCCAGTTACAGGTTTAATAGGAATCGGTGGAATAGTGATCGGTTTCACGTT
ATGTTTTCCTTGGATTTTTAAAATTCTAATATTCTTTCTTTTTAAATTAGAGGATTTATCTGATCGTTCCCTCGTTTTTA
TAAAAGTCGGTTTAGAAGAAATAAAAAATCAATCTCTTAGAAACACTCTTACTTCCGCCACTTTAATGCTTGCTACTTCT
CTTGTAGTTTGCCTATCGATCTTAACAGATAGTTATAGAAGATCTTTAAATGACTGGGTAGAAACCGAATTTCCGGCGGA
ATTTACAATCATCAACACTGCAAACCTTGCTGCGGGAATTCAAGGAGGAGTTCCACAAAATCTATTAAACGAACTCTCTC
AAATTCAGGAAATACGATCTTTAGACGGCTTTTTTATCAATACAAGAGCAGAAACAAATCGAGGAAACTTTACAATTCAT
GCATATACTTTTGCAACCTATGATCGAGAGAATTCTCCAGAACGTATCATAAAAATGGAAAACGAAATTTTAATTTCTTC
CAATATGGCTTATCTACAAAACTTTAATATAGATGATTCAATTTTAATCGAGACAAAATACGGAAAAAAAGAATTTAAAA
TCCGGGGAATTAAAGAGCATTTTTTTTCAGAACGAGGAACTATCATGATGGATATTAAAAGCTATAAAAGGTTTTTCGAC
CTTAGTGCATATAACTCAATTAAAATATTTTTAAAAAAAGATTCAAATTCAAAAGATGTGGAAAAATCAATTTCCCAAAT
TTTAGAAAAAAATCCCAACTTAAAATTGTTTAATACAAAAGAGCTTAAGGAACTTTATACGGAAGGAGTGAACAAAGTAT
TTGGAGTTTTAGAAACTCTTAAAATGACCGCCTTAATCATAGCAATGTTATCTTTGATTTCTTCCCTATTTCATAATCTC
ATTTCTAAGAAAAACACTTTAGGAATTCTCAAATATCTAGGAGCCGATCAGAGACAACTTGGAAAAATTTTATTGACCGA
AAGTATATTTATCACGATTGTTTCTGTTTGTTTTGGTATTCTTTTGGCATTTTTTCTTTCCCCGATCGTTTTATATGTGG
TCAACAAGAACGCATTTGGATGGACTTTAAAATTCACAGTTTCTCCGGAAATACCGATCTTTTTTCTGGCATTATCTCCC
ATCCTTGGTGTATTTTCCTGTTTAGTTCCGTTATACACTTTACAAAAATTGAGTTTTCGGATTAGCCAAGAATAA

Upstream 100 bases:

>100_bases
ATGGATTTACACTTTTTATCGTAACCCACGATCAAAAATTAGGCTCCCTGGGAGAATTTCGTCTCAAAATGGAAGACGGA
ACTTTAACAAACTAAACGTA

Downstream 100 bases:

>100_bases
CAGCAAAACCAAAACTAACTTGATTCGAAACCTTATTCGCAATAGGATGCTCTCATTCTTATGAGTGCATTAAGCGAAGT
AGCATTACAAATTGCTTCCG

Product: ABC transporter integral membrane protein

Products: NA

Alternate protein names: Permease; ABC Transporter Membrane Protein; ABC Transporter Integral Membrane Protein; Lipoprotein Releasing System LolE Permease Component; ABC-Type Transport System Permease Component

Number of amino acids: Translated: 824; Mature: 823

Protein sequence:

>824_residues
MSFRIYILFLFEYFRNHKLGTFFALSGISLGVGLFISTTANGIKAEKSLTDFAMGYFQGEYKIKISSSLGDQNLPVSLIR
ELSEDTNLTWIKKIVPRFQKEIIVNDSVRAVYIGLDFLKESGNLRYKPDAEHVESLIFISSSLSKKIDISKINIRADSRK
FTLAKPVVLETEGGSILMEDIESAMERFDLKEHVSFLLIQPNEFRSEQKKILEQKLGPDYRVETVEDIQEKSSNALRSFQ
LNLLVISFISLVIALFMVSNTMSGLYFSREKELGILKTMGLNAKQTFSLFISQALLLGSVGSLLGLGLGLLFSRLEFFSP
ETTSADLSYLNTYQSLPFSAWFLGLGIGIIGSFLSAALPSFRAGKISPVSILKEATSQTSPVNEFRLLSIGIFSIFIFVI
VAFLPLRWKFPVTGLIGIGGIVIGFTLCFPWIFKILIFFLFKLEDLSDRSLVFIKVGLEEIKNQSLRNTLTSATLMLATS
LVVCLSILTDSYRRSLNDWVETEFPAEFTIINTANLAAGIQGGVPQNLLNELSQIQEIRSLDGFFINTRAETNRGNFTIH
AYTFATYDRENSPERIIKMENEILISSNMAYLQNFNIDDSILIETKYGKKEFKIRGIKEHFFSERGTIMMDIKSYKRFFD
LSAYNSIKIFLKKDSNSKDVEKSISQILEKNPNLKLFNTKELKELYTEGVNKVFGVLETLKMTALIIAMLSLISSLFHNL
ISKKNTLGILKYLGADQRQLGKILLTESIFITIVSVCFGILLAFFLSPIVLYVVNKNAFGWTLKFTVSPEIPIFFLALSP
ILGVFSCLVPLYTLQKLSFRISQE

Sequences:

>Translated_824_residues
MSFRIYILFLFEYFRNHKLGTFFALSGISLGVGLFISTTANGIKAEKSLTDFAMGYFQGEYKIKISSSLGDQNLPVSLIR
ELSEDTNLTWIKKIVPRFQKEIIVNDSVRAVYIGLDFLKESGNLRYKPDAEHVESLIFISSSLSKKIDISKINIRADSRK
FTLAKPVVLETEGGSILMEDIESAMERFDLKEHVSFLLIQPNEFRSEQKKILEQKLGPDYRVETVEDIQEKSSNALRSFQ
LNLLVISFISLVIALFMVSNTMSGLYFSREKELGILKTMGLNAKQTFSLFISQALLLGSVGSLLGLGLGLLFSRLEFFSP
ETTSADLSYLNTYQSLPFSAWFLGLGIGIIGSFLSAALPSFRAGKISPVSILKEATSQTSPVNEFRLLSIGIFSIFIFVI
VAFLPLRWKFPVTGLIGIGGIVIGFTLCFPWIFKILIFFLFKLEDLSDRSLVFIKVGLEEIKNQSLRNTLTSATLMLATS
LVVCLSILTDSYRRSLNDWVETEFPAEFTIINTANLAAGIQGGVPQNLLNELSQIQEIRSLDGFFINTRAETNRGNFTIH
AYTFATYDRENSPERIIKMENEILISSNMAYLQNFNIDDSILIETKYGKKEFKIRGIKEHFFSERGTIMMDIKSYKRFFD
LSAYNSIKIFLKKDSNSKDVEKSISQILEKNPNLKLFNTKELKELYTEGVNKVFGVLETLKMTALIIAMLSLISSLFHNL
ISKKNTLGILKYLGADQRQLGKILLTESIFITIVSVCFGILLAFFLSPIVLYVVNKNAFGWTLKFTVSPEIPIFFLALSP
ILGVFSCLVPLYTLQKLSFRISQE
>Mature_823_residues
SFRIYILFLFEYFRNHKLGTFFALSGISLGVGLFISTTANGIKAEKSLTDFAMGYFQGEYKIKISSSLGDQNLPVSLIRE
LSEDTNLTWIKKIVPRFQKEIIVNDSVRAVYIGLDFLKESGNLRYKPDAEHVESLIFISSSLSKKIDISKINIRADSRKF
TLAKPVVLETEGGSILMEDIESAMERFDLKEHVSFLLIQPNEFRSEQKKILEQKLGPDYRVETVEDIQEKSSNALRSFQL
NLLVISFISLVIALFMVSNTMSGLYFSREKELGILKTMGLNAKQTFSLFISQALLLGSVGSLLGLGLGLLFSRLEFFSPE
TTSADLSYLNTYQSLPFSAWFLGLGIGIIGSFLSAALPSFRAGKISPVSILKEATSQTSPVNEFRLLSIGIFSIFIFVIV
AFLPLRWKFPVTGLIGIGGIVIGFTLCFPWIFKILIFFLFKLEDLSDRSLVFIKVGLEEIKNQSLRNTLTSATLMLATSL
VVCLSILTDSYRRSLNDWVETEFPAEFTIINTANLAAGIQGGVPQNLLNELSQIQEIRSLDGFFINTRAETNRGNFTIHA
YTFATYDRENSPERIIKMENEILISSNMAYLQNFNIDDSILIETKYGKKEFKIRGIKEHFFSERGTIMMDIKSYKRFFDL
SAYNSIKIFLKKDSNSKDVEKSISQILEKNPNLKLFNTKELKELYTEGVNKVFGVLETLKMTALIIAMLSLISSLFHNLI
SKKNTLGILKYLGADQRQLGKILLTESIFITIVSVCFGILLAFFLSPIVLYVVNKNAFGWTLKFTVSPEIPIFFLALSPI
LGVFSCLVPLYTLQKLSFRISQE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92915; Mature: 92784

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRIYILFLFEYFRNHKLGTFFALSGISLGVGLFISTTANGIKAEKSLTDFAMGYFQGE
CCEEEEHHHHHHHHHCCCCCCEEEECCHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCE
YKIKISSSLGDQNLPVSLIRELSEDTNLTWIKKIVPRFQKEIIVNDSVRAVYIGLDFLKE
EEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHHC
SGNLRYKPDAEHVESLIFISSSLSKKIDISKINIRADSRKFTLAKPVVLETEGGSILMED
CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEECCEEEEECCCCHHHHH
IESAMERFDLKEHVSFLLIQPNEFRSEQKKILEQKLGPDYRVETVEDIQEKSSNALRSFQ
HHHHHHHCCHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LNLLVISFISLVIALFMVSNTMSGLYFSREKELGILKTMGLNAKQTFSLFISQALLLGSV
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH
GSLLGLGLGLLFSRLEFFSPETTSADLSYLNTYQSLPFSAWFLGLGIGIIGSFLSAALPS
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
FRAGKISPVSILKEATSQTSPVNEFRLLSIGIFSIFIFVIVAFLPLRWKFPVTGLIGIGG
CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
IVIGFTLCFPWIFKILIFFLFKLEDLSDRSLVFIKVGLEEIKNQSLRNTLTSATLMLATS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHH
LVVCLSILTDSYRRSLNDWVETEFPAEFTIINTANLAAGIQGGVPQNLLNELSQIQEIRS
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHH
LDGFFINTRAETNRGNFTIHAYTFATYDRENSPERIIKMENEILISSNMAYLQNFNIDDS
CCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCHHHHEECCCEEEECCHHHHHCCCCCCC
ILIETKYGKKEFKIRGIKEHFFSERGTIMMDIKSYKRFFDLSAYNSIKIFLKKDSNSKDV
EEEEECCCCCCEEECCHHHHHCCCCCCEEEEHHHHHHHHCCCCCCEEEEEEEECCCCHHH
EKSISQILEKNPNLKLFNTKELKELYTEGVNKVFGVLETLKMTALIIAMLSLISSLFHNL
HHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISKKNTLGILKYLGADQRQLGKILLTESIFITIVSVCFGILLAFFLSPIVLYVVNKNAFG
HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCE
WTLKFTVSPEIPIFFLALSPILGVFSCLVPLYTLQKLSFRISQE
EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFRIYILFLFEYFRNHKLGTFFALSGISLGVGLFISTTANGIKAEKSLTDFAMGYFQGE
CEEEEHHHHHHHHHCCCCCCEEEECCHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCE
YKIKISSSLGDQNLPVSLIRELSEDTNLTWIKKIVPRFQKEIIVNDSVRAVYIGLDFLKE
EEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHHC
SGNLRYKPDAEHVESLIFISSSLSKKIDISKINIRADSRKFTLAKPVVLETEGGSILMED
CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEECCEEEEECCCCHHHHH
IESAMERFDLKEHVSFLLIQPNEFRSEQKKILEQKLGPDYRVETVEDIQEKSSNALRSFQ
HHHHHHHCCHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LNLLVISFISLVIALFMVSNTMSGLYFSREKELGILKTMGLNAKQTFSLFISQALLLGSV
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH
GSLLGLGLGLLFSRLEFFSPETTSADLSYLNTYQSLPFSAWFLGLGIGIIGSFLSAALPS
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
FRAGKISPVSILKEATSQTSPVNEFRLLSIGIFSIFIFVIVAFLPLRWKFPVTGLIGIGG
CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
IVIGFTLCFPWIFKILIFFLFKLEDLSDRSLVFIKVGLEEIKNQSLRNTLTSATLMLATS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHH
LVVCLSILTDSYRRSLNDWVETEFPAEFTIINTANLAAGIQGGVPQNLLNELSQIQEIRS
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHH
LDGFFINTRAETNRGNFTIHAYTFATYDRENSPERIIKMENEILISSNMAYLQNFNIDDS
CCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCHHHHEECCCEEEECCHHHHHCCCCCCC
ILIETKYGKKEFKIRGIKEHFFSERGTIMMDIKSYKRFFDLSAYNSIKIFLKKDSNSKDV
EEEEECCCCCCEEECCHHHHHCCCCCCEEEEHHHHHHHHCCCCCCEEEEEEEECCCCHHH
EKSISQILEKNPNLKLFNTKELKELYTEGVNKVFGVLETLKMTALIIAMLSLISSLFHNL
HHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISKKNTLGILKYLGADQRQLGKILLTESIFITIVSVCFGILLAFFLSPIVLYVVNKNAFG
HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCE
WTLKFTVSPEIPIFFLALSPILGVFSCLVPLYTLQKLSFRISQE
EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA