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The map label for this gene is rsmI [H]

Identifier: 45656956

GI number: 45656956

Start: 1323897

End: 1324649

Strand: Reverse

Name: rsmI [H]

Synonym: LIC11072

Alternate gene names: 45656956

Gene position: 1324649-1323897 (Counterclockwise)

Preceding gene: 45656957

Following gene: 45656955

Centisome position: 30.97

GC content: 37.85

Gene sequence:

>753_bases
ATGAATTCAGAGGAAGAATCTTCGGAAATTCCCCTCGAACCCGGAACTTTATACGTTGTTTCCACACCGATCGGAAATTT
AGAAGATCTCACTTTCCGAGCACTTAGAATTCTAAAAAATACGGATCGAATCCTTTGTGAAAATTCAGGGCATTCTAAAA
AATTATTTCGATCTTATTCAATCCACACTCAGTGTTCTACACTTTACAAAGATCAATCTGAAAACCCTTACCTTAGTATA
TTAGAAGAATTGAAAGAAGGAAAAACGTTTGCACTCGTTTCAGACGCGGGAACTCCCGGAATTTCTGATCCAGGTTCTCA
TTTGATTCGTGTAGTTCGAGAAAAGGGATTTAAAATTTCCCCCATTCCGGGTCCAAGCGCACTGACCGCACTACTTGGGA
TTTCAGGCTGGCAAGCCAATCCGTTTTTGTTTCTAGGATTTTTATCCGAAAAAAAAGGAAAAAAAAGAAATCAACTCTAC
GAATGGAAAGAATTCGAAGGTCTGATTATGATTTTTGAATCCGTTCACAGAATCGGGGATACTTTAAACTCCATCCAAGA
AGTATTTTCGGACTGTGAATTTCTGATAGGCAGGGAAATGACTAAAATTCACGAAGAAATCCTTCATTTTTCTCCTTTTG
CAACCAAAAAACCGAAGGAATTTGCTTCTAAAGGTGAATTTGTGGTTTTAATCAATACGAATCGTAAAAAAATGCTTAAA
GGCTCTATAGGATCGGCCGATAGAATTCAGTAG

Upstream 100 bases:

>100_bases
ACTGTCCCGTTGGAACTCTTTGTAATCCTTGTACAATTTCGGGATCAGAAGAAACTGGTTGCATTTGTCCTACTGGAGTT
TCTCCTCCAGGTTGTAATTT

Downstream 100 bases:

>100_bases
AGGTAACAAATCATGACTATCGATAAAATCGGTGGGATCGGTGGAAGCGGATACGAACCGAAAAGAACCGCCCCGGTTAA
AAAAACGGAATCAAAAGAAA

Product: tetrapyrrole (corrin/porphyrin) methylase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MNSEEESSEIPLEPGTLYVVSTPIGNLEDLTFRALRILKNTDRILCENSGHSKKLFRSYSIHTQCSTLYKDQSENPYLSI
LEELKEGKTFALVSDAGTPGISDPGSHLIRVVREKGFKISPIPGPSALTALLGISGWQANPFLFLGFLSEKKGKKRNQLY
EWKEFEGLIMIFESVHRIGDTLNSIQEVFSDCEFLIGREMTKIHEEILHFSPFATKKPKEFASKGEFVVLINTNRKKMLK
GSIGSADRIQ

Sequences:

>Translated_250_residues
MNSEEESSEIPLEPGTLYVVSTPIGNLEDLTFRALRILKNTDRILCENSGHSKKLFRSYSIHTQCSTLYKDQSENPYLSI
LEELKEGKTFALVSDAGTPGISDPGSHLIRVVREKGFKISPIPGPSALTALLGISGWQANPFLFLGFLSEKKGKKRNQLY
EWKEFEGLIMIFESVHRIGDTLNSIQEVFSDCEFLIGREMTKIHEEILHFSPFATKKPKEFASKGEFVVLINTNRKKMLK
GSIGSADRIQ
>Mature_250_residues
MNSEEESSEIPLEPGTLYVVSTPIGNLEDLTFRALRILKNTDRILCENSGHSKKLFRSYSIHTQCSTLYKDQSENPYLSI
LEELKEGKTFALVSDAGTPGISDPGSHLIRVVREKGFKISPIPGPSALTALLGISGWQANPFLFLGFLSEKKGKKRNQLY
EWKEFEGLIMIFESVHRIGDTLNSIQEVFSDCEFLIGREMTKIHEEILHFSPFATKKPKEFASKGEFVVLINTNRKKMLK
GSIGSADRIQ

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=228, Percent_Identity=36.4035087719298, Blast_Score=155, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 28115; Mature: 28115

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSEEESSEIPLEPGTLYVVSTPIGNLEDLTFRALRILKNTDRILCENSGHSKKLFRSYS
CCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHC
IHTQCSTLYKDQSENPYLSILEELKEGKTFALVSDAGTPGISDPGSHLIRVVREKGFKIS
HHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEC
PIPGPSALTALLGISGWQANPFLFLGFLSEKKGKKRNQLYEWKEFEGLIMIFESVHRIGD
CCCCHHHHHHHHHCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TLNSIQEVFSDCEFLIGREMTKIHEEILHFSPFATKKPKEFASKGEFVVLINTNRKKMLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEECCHHHHHH
GSIGSADRIQ
CCCCCCCCCC
>Mature Secondary Structure
MNSEEESSEIPLEPGTLYVVSTPIGNLEDLTFRALRILKNTDRILCENSGHSKKLFRSYS
CCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHC
IHTQCSTLYKDQSENPYLSILEELKEGKTFALVSDAGTPGISDPGSHLIRVVREKGFKIS
HHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEC
PIPGPSALTALLGISGWQANPFLFLGFLSEKKGKKRNQLYEWKEFEGLIMIFESVHRIGD
CCCCHHHHHHHHHCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TLNSIQEVFSDCEFLIGREMTKIHEEILHFSPFATKKPKEFASKGEFVVLINTNRKKMLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEECCHHHHHH
GSIGSADRIQ
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA