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The map label for this gene is 45656944

Identifier: 45656944

GI number: 45656944

Start: 1305290

End: 1306660

Strand: Reverse

Name: 45656944

Synonym: LIC11060

Alternate gene names: NA

Gene position: 1306660-1305290 (Counterclockwise)

Preceding gene: 45656947

Following gene: 45656943

Centisome position: 30.55

GC content: 36.47

Gene sequence:

>1371_bases
ATGCAAAAAAAATCTTCTCATAATCCAGAGCCTAACTTTTGGGATTTATTGGCTCCCTTGTTTGAATTTATAAATCCTTT
GCTTCATATCAGAAACGATACGGACGAAACAGGAACTATAGAATCGATTAAACGAGGAGTCAATTTTTCTGGCTCTGCTT
TATGGACTTTGATTTTTGCGATTTTTATCGCTTCTATCGGTCTCAATATTAATTCCACCGCAGTTATCATTGGTGCGATG
CTTATTTCTCCTTTGATGGGTCCGATTATGGGCGCAGGACTTGCTTTAGGAATTTATGATTTTGAACTTTTGAAAAAATC
ACTTCGCAATCTTGCGGTAATGACATTCTTAAGTCTTTTTACATCTGCTCTTTACTTTTTGATTTCACCTCTTTCTGACG
CTCAATCAGAGCTTCTGGCCAGAACTTCTCCTACCATCTACGACGTGTTAATTGCTTTTATAGGTGGGGCCACCGGAATT
GTAGCCGGTTCCAGAAAAGACAAAATCTCAAACGCAATTCCAGGAGTGGCGATCGCGACCGCTTTGATGCCACCTCTTTG
TACTGCTGGTTATGGATTGGCCAATTGGAATTTTAAATTTTTCTTAGGTGCTTTTTATCTCTATTTGATCAACAGCGTTT
TTATAGGTATCAGTACTTTGATTTTCGTACGTTATCTGAAATTTCAGCGTACCGTTTATACGGACCCGGCCGTTGATAAA
AAGATTTATCGTTATGTGTATTTATTGTCCGTTTGTTTAATTCTTCCTAGCATTTACTTTGCCTACGACATCGTAGTCGA
TTCTGCTTTTAAACGAAACGCCAAAAGTTATCTCGAAAATCAATTCACATTCGAAAAAAGTAAAATTCTATCTGCTAATA
TTGTTAGGAAAGGTGGTGAAAAAAAGATAGAAGTTACTATGATCGGAGAAACCTTGTCCGAAGACGTTCTTTCCCAGTTA
AAAACGATTCTTCCTAAATACGGCCTGGAAGATACGGAATTAAAAGTCATTCAATCCTATAGAGACAGCTCTCAATTAAA
TCAACAGTCAGGTTTTTCTTTTCAAAACGAAGCCGGTTCTAAAATTCAGGAAGAAAAAATTCATCTTTTAGAAAACGAAC
TTAGAATTTTAAAAGATAAGGATCATCTGGCTCAATCCGTTGCCAAGGAAATCAACGTTTTGTTTCCTTCTGTTGATTCG
TTTTCCTTGGGAGATTTTTTAGTCCAAAACGTTCAAGATTTTTCTTCTTCGAAAGAAGTAACAGTACTAGTCAAATGGAA
ACATCAGGTTGGAAGTGTTGAAAGAAAACGATTGGAACTTTTTTTAAAACTCAGATTGGGTTTAGAAAATTTACAAGTCC
TGGATCTTTAA

Upstream 100 bases:

>100_bases
CTTTGTAGATCCGATTCCATTCTAAAAAATCTTGTGTGAAATCAAAATAAGATCTAACATCTGTCAAATGTCTTCGTCAG
TTTTATAGGAGAAAAATTTT

Downstream 100 bases:

>100_bases
TTCAAAAAAACTAAATGTATCTGCGAGAATTCCCAAGTTTAGACTAGATTTTTTCGAACTCGAAAAAGTAGTAGTTCCCA
CAGTTTCAAAGTTAATCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MQKKSSHNPEPNFWDLLAPLFEFINPLLHIRNDTDETGTIESIKRGVNFSGSALWTLIFAIFIASIGLNINSTAVIIGAM
LISPLMGPIMGAGLALGIYDFELLKKSLRNLAVMTFLSLFTSALYFLISPLSDAQSELLARTSPTIYDVLIAFIGGATGI
VAGSRKDKISNAIPGVAIATALMPPLCTAGYGLANWNFKFFLGAFYLYLINSVFIGISTLIFVRYLKFQRTVYTDPAVDK
KIYRYVYLLSVCLILPSIYFAYDIVVDSAFKRNAKSYLENQFTFEKSKILSANIVRKGGEKKIEVTMIGETLSEDVLSQL
KTILPKYGLEDTELKVIQSYRDSSQLNQQSGFSFQNEAGSKIQEEKIHLLENELRILKDKDHLAQSVAKEINVLFPSVDS
FSLGDFLVQNVQDFSSSKEVTVLVKWKHQVGSVERKRLELFLKLRLGLENLQVLDL

Sequences:

>Translated_456_residues
MQKKSSHNPEPNFWDLLAPLFEFINPLLHIRNDTDETGTIESIKRGVNFSGSALWTLIFAIFIASIGLNINSTAVIIGAM
LISPLMGPIMGAGLALGIYDFELLKKSLRNLAVMTFLSLFTSALYFLISPLSDAQSELLARTSPTIYDVLIAFIGGATGI
VAGSRKDKISNAIPGVAIATALMPPLCTAGYGLANWNFKFFLGAFYLYLINSVFIGISTLIFVRYLKFQRTVYTDPAVDK
KIYRYVYLLSVCLILPSIYFAYDIVVDSAFKRNAKSYLENQFTFEKSKILSANIVRKGGEKKIEVTMIGETLSEDVLSQL
KTILPKYGLEDTELKVIQSYRDSSQLNQQSGFSFQNEAGSKIQEEKIHLLENELRILKDKDHLAQSVAKEINVLFPSVDS
FSLGDFLVQNVQDFSSSKEVTVLVKWKHQVGSVERKRLELFLKLRLGLENLQVLDL
>Mature_456_residues
MQKKSSHNPEPNFWDLLAPLFEFINPLLHIRNDTDETGTIESIKRGVNFSGSALWTLIFAIFIASIGLNINSTAVIIGAM
LISPLMGPIMGAGLALGIYDFELLKKSLRNLAVMTFLSLFTSALYFLISPLSDAQSELLARTSPTIYDVLIAFIGGATGI
VAGSRKDKISNAIPGVAIATALMPPLCTAGYGLANWNFKFFLGAFYLYLINSVFIGISTLIFVRYLKFQRTVYTDPAVDK
KIYRYVYLLSVCLILPSIYFAYDIVVDSAFKRNAKSYLENQFTFEKSKILSANIVRKGGEKKIEVTMIGETLSEDVLSQL
KTILPKYGLEDTELKVIQSYRDSSQLNQQSGFSFQNEAGSKIQEEKIHLLENELRILKDKDHLAQSVAKEINVLFPSVDS
FSLGDFLVQNVQDFSSSKEVTVLVKWKHQVGSVERKRLELFLKLRLGLENLQVLDL

Specific function: Unknown

COG id: COG1808

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50969; Mature: 50969

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKKSSHNPEPNFWDLLAPLFEFINPLLHIRNDTDETGTIESIKRGVNFSGSALWTLIFA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHH
IFIASIGLNINSTAVIIGAMLISPLMGPIMGAGLALGIYDFELLKKSLRNLAVMTFLSLF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSALYFLISPLSDAQSELLARTSPTIYDVLIAFIGGATGIVAGSRKDKISNAIPGVAIAT
HHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHEECCCCHHHHHHCCCHHHHHH
ALMPPLCTAGYGLANWNFKFFLGAFYLYLINSVFIGISTLIFVRYLKFQRTVYTDPAVDK
HHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
KIYRYVYLLSVCLILPSIYFAYDIVVDSAFKRNAKSYLENQFTFEKSKILSANIVRKGGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KKIEVTMIGETLSEDVLSQLKTILPKYGLEDTELKVIQSYRDSSQLNQQSGFSFQNEAGS
CEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCC
KIQEEKIHLLENELRILKDKDHLAQSVAKEINVLFPSVDSFSLGDFLVQNVQDFSSSKEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCE
TVLVKWKHQVGSVERKRLELFLKLRLGLENLQVLDL
EEEEEECHHHCHHHHHHHHHHHHHHHCCCCCEEECC
>Mature Secondary Structure
MQKKSSHNPEPNFWDLLAPLFEFINPLLHIRNDTDETGTIESIKRGVNFSGSALWTLIFA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHH
IFIASIGLNINSTAVIIGAMLISPLMGPIMGAGLALGIYDFELLKKSLRNLAVMTFLSLF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSALYFLISPLSDAQSELLARTSPTIYDVLIAFIGGATGIVAGSRKDKISNAIPGVAIAT
HHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHEECCCCHHHHHHCCCHHHHHH
ALMPPLCTAGYGLANWNFKFFLGAFYLYLINSVFIGISTLIFVRYLKFQRTVYTDPAVDK
HHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
KIYRYVYLLSVCLILPSIYFAYDIVVDSAFKRNAKSYLENQFTFEKSKILSANIVRKGGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KKIEVTMIGETLSEDVLSQLKTILPKYGLEDTELKVIQSYRDSSQLNQQSGFSFQNEAGS
CEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCC
KIQEEKIHLLENELRILKDKDHLAQSVAKEINVLFPSVDSFSLGDFLVQNVQDFSSSKEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCE
TVLVKWKHQVGSVERKRLELFLKLRLGLENLQVLDL
EEEEEECHHHCHHHHHHHHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA