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The map label for this gene is 45656937

Identifier: 45656937

GI number: 45656937

Start: 1298134

End: 1298796

Strand: Reverse

Name: 45656937

Synonym: LIC11053

Alternate gene names: NA

Gene position: 1298796-1298134 (Counterclockwise)

Preceding gene: 45656939

Following gene: 45656935

Centisome position: 30.37

GC content: 34.54

Gene sequence:

>663_bases
ATGTATTCTGAGAAATTATACCGCTTTACAGAACCGTTTAATGATCTTTATGCGAAAGCAAGCAGAATTAACTATGAATA
CCCGGAACCACAAGATTCTAAACGAATTAAACCTCTTGTCTTTATTTGGCAGCCTGGCTCCGATTTGATTGGGGATTTTA
CTTGGCCGGGGTTCGACGATAATATTATCATCACCGAAAGAGTCTGTGATTTTTTTTATTCGGAAAAAATCCTAGGTTTT
GGACCGGCACCCGTGGAGATTTTGGAAAACAACTTAAAACGCAAAAGGATCAAATATGTCAATATGCCCTACCGAGGACC
TAGATTGTTCGATCTTTGGGTTACTACTTGGGTTCATTTTAACATACAATATTCTACGGTAGATCAGATTCAAGATGAAG
ATGGGTTTTATTATAAAGTCAATGGAATAGAAAAAAATGAATCATTACGGGATTCACAAACAATAGAATTAAAAAAAGTT
AAAATTTCACGAATTCCAAGAAAAGGAATTTTCGTACATAAGAATGATCTACATGGATCAAACATCTTCGGAATTTTAGA
ATTTCCCGGGTGGATATTTTGTACGGAAAAAATGAAACGACTCATCGAACTCAATTCATTTACAAATGTTTCTTTCCTAG
AAATGGGAAATTTACTAGATTAA

Upstream 100 bases:

>100_bases
ACAAATGGAGAATTAATTTTTCAACAACTCTATTATATTAACTCCGAAGTTTCTACTATATTCTCCTTAAAACAATCAGT
TAAATAATTTATAATATTAG

Downstream 100 bases:

>100_bases
CGTGAATTCGATATAACAAATGCGAAAGCGATTATTATGCTGCGATCCATAGAAAGCCCGTTCTGTTGAGTTCATTTTGA
TTCTAAAATCCTATTCAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MYSEKLYRFTEPFNDLYAKASRINYEYPEPQDSKRIKPLVFIWQPGSDLIGDFTWPGFDDNIIITERVCDFFYSEKILGF
GPAPVEILENNLKRKRIKYVNMPYRGPRLFDLWVTTWVHFNIQYSTVDQIQDEDGFYYKVNGIEKNESLRDSQTIELKKV
KISRIPRKGIFVHKNDLHGSNIFGILEFPGWIFCTEKMKRLIELNSFTNVSFLEMGNLLD

Sequences:

>Translated_220_residues
MYSEKLYRFTEPFNDLYAKASRINYEYPEPQDSKRIKPLVFIWQPGSDLIGDFTWPGFDDNIIITERVCDFFYSEKILGF
GPAPVEILENNLKRKRIKYVNMPYRGPRLFDLWVTTWVHFNIQYSTVDQIQDEDGFYYKVNGIEKNESLRDSQTIELKKV
KISRIPRKGIFVHKNDLHGSNIFGILEFPGWIFCTEKMKRLIELNSFTNVSFLEMGNLLD
>Mature_220_residues
MYSEKLYRFTEPFNDLYAKASRINYEYPEPQDSKRIKPLVFIWQPGSDLIGDFTWPGFDDNIIITERVCDFFYSEKILGF
GPAPVEILENNLKRKRIKYVNMPYRGPRLFDLWVTTWVHFNIQYSTVDQIQDEDGFYYKVNGIEKNESLRDSQTIELKKV
KISRIPRKGIFVHKNDLHGSNIFGILEFPGWIFCTEKMKRLIELNSFTNVSFLEMGNLLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26064; Mature: 26064

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSEKLYRFTEPFNDLYAKASRINYEYPEPQDSKRIKPLVFIWQPGSDLIGDFTWPGFDD
CCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
NIIITERVCDFFYSEKILGFGPAPVEILENNLKRKRIKYVNMPYRGPRLFDLWVTTWVHF
CEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEEEEEEE
NIQYSTVDQIQDEDGFYYKVNGIEKNESLRDSQTIELKKVKISRIPRKGIFVHKNDLHGS
EEEECHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCC
NIFGILEFPGWIFCTEKMKRLIELNSFTNVSFLEMGNLLD
CEEEEEECCCEEEEHHHHHHHHHHCCCCCCHHHHHCCCCC
>Mature Secondary Structure
MYSEKLYRFTEPFNDLYAKASRINYEYPEPQDSKRIKPLVFIWQPGSDLIGDFTWPGFDD
CCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
NIIITERVCDFFYSEKILGFGPAPVEILENNLKRKRIKYVNMPYRGPRLFDLWVTTWVHF
CEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEEEEEEE
NIQYSTVDQIQDEDGFYYKVNGIEKNESLRDSQTIELKKVKISRIPRKGIFVHKNDLHGS
EEEECHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCC
NIFGILEFPGWIFCTEKMKRLIELNSFTNVSFLEMGNLLD
CEEEEEECCCEEEEHHHHHHHHHHCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA