Click here to switch to the map view.

The map label for this gene is 45656933

Identifier: 45656933

GI number: 45656933

Start: 1290179

End: 1291135

Strand: Reverse

Name: 45656933

Synonym: LIC11049

Alternate gene names: NA

Gene position: 1291135-1290179 (Counterclockwise)

Preceding gene: 45656935

Following gene: 45656932

Centisome position: 30.19

GC content: 40.33

Gene sequence:

>957_bases
ATGGAATTCGAAATTAACTTGTTCATTCAAATCCGAACAAAACAACCCCTATCACTTTGTAAAAAATGGAAATCAAATCG
TTTAAAAACTGAGTTGCTTATGAAAAAAAGAATCACCTTCGTTGCCGTCATTTTACTTTTGAACTACTGCGTTTCGATCC
CGAATTACCAGTTATCCTCAAACGTGCCGCAAATTGAGAAAAATCGCGAAGCAAAATTGATTTCGGCTTTTTTCGGTTTA
GATAACTCTTTACCATGGCGCTCGTTTTTACTGTGGAGAAACGCACCCGGAAAGGATGGAATGCCACTCGTTTTCTCGCA
CGAGATCGATCCTACGACGGTAGACCTTTCTGACTTTCAGATCACTACTAAAAAAGGAGAAATTTTTTATCCCCTATTCG
CCACATTCGTACCTTCGTTAGAGCAGTTCGAATTGCGTACCATTTTGTTGATCGGTCAATTTGGCGATCACCCAGATAAC
GAACCTAACGAAGTAGTCATCGTAGGGGAACTCAAAAGCCGAGATGGGCAAAATTTAATCGGACAAAAAATCCAAGTCAC
TCCTTTAACCGCTGGGCCTTTTATCAGTTATGCAGAATATTTTAGATTCGAAGATTCATATCCTTATAACACTTCTGTAC
ACGGTGCAGATTGCCCACTACTTGAAACAACGGTAGTAGTAAGAACCGTGTGGGCCGGAGGTGTTCGAGCAATCGATGGT
CAAGAGTTAGGTGATAGAGAGCTGAAAAAATTCAAAATCGAAATGATCTCCGGAAGTGAAACCTTTACAGTATCTCCGTT
TAAAATCGCAGACATAGACGACAATGATAATAATATCGATCTGTGTATCGCCGAACAAGGAATTCCAAAGTCAGTAGAAG
TGGATGCGGATACAGTTATCGATCCCAGAGGAGATCGAAATCCTATTACAAAAATGGAAATTTTGAGCCGTTGGTAA

Upstream 100 bases:

>100_bases
CGAACTTACGTTAAATTAGGAAACAGATCCCCCATCCGTTTTTCTTAAAGAAAAACGAATTGCAGAATTCGAAGATCGTT
TAAAGTATGCAAACATTCTA

Downstream 100 bases:

>100_bases
TATTTTACCTCGATTACTTTTCGGATCGATCTATGGAATTCAATTTAGAATACGAACCCATAGGTTTAGAAAATTCAGTT
CAAATAAAAAATCTTTGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MEFEINLFIQIRTKQPLSLCKKWKSNRLKTELLMKKRITFVAVILLLNYCVSIPNYQLSSNVPQIEKNREAKLISAFFGL
DNSLPWRSFLLWRNAPGKDGMPLVFSHEIDPTTVDLSDFQITTKKGEIFYPLFATFVPSLEQFELRTILLIGQFGDHPDN
EPNEVVIVGELKSRDGQNLIGQKIQVTPLTAGPFISYAEYFRFEDSYPYNTSVHGADCPLLETTVVVRTVWAGGVRAIDG
QELGDRELKKFKIEMISGSETFTVSPFKIADIDDNDNNIDLCIAEQGIPKSVEVDADTVIDPRGDRNPITKMEILSRW

Sequences:

>Translated_318_residues
MEFEINLFIQIRTKQPLSLCKKWKSNRLKTELLMKKRITFVAVILLLNYCVSIPNYQLSSNVPQIEKNREAKLISAFFGL
DNSLPWRSFLLWRNAPGKDGMPLVFSHEIDPTTVDLSDFQITTKKGEIFYPLFATFVPSLEQFELRTILLIGQFGDHPDN
EPNEVVIVGELKSRDGQNLIGQKIQVTPLTAGPFISYAEYFRFEDSYPYNTSVHGADCPLLETTVVVRTVWAGGVRAIDG
QELGDRELKKFKIEMISGSETFTVSPFKIADIDDNDNNIDLCIAEQGIPKSVEVDADTVIDPRGDRNPITKMEILSRW
>Mature_318_residues
MEFEINLFIQIRTKQPLSLCKKWKSNRLKTELLMKKRITFVAVILLLNYCVSIPNYQLSSNVPQIEKNREAKLISAFFGL
DNSLPWRSFLLWRNAPGKDGMPLVFSHEIDPTTVDLSDFQITTKKGEIFYPLFATFVPSLEQFELRTILLIGQFGDHPDN
EPNEVVIVGELKSRDGQNLIGQKIQVTPLTAGPFISYAEYFRFEDSYPYNTSVHGADCPLLETTVVVRTVWAGGVRAIDG
QELGDRELKKFKIEMISGSETFTVSPFKIADIDDNDNNIDLCIAEQGIPKSVEVDADTVIDPRGDRNPITKMEILSRW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36112; Mature: 36112

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFEINLFIQIRTKQPLSLCKKWKSNRLKTELLMKKRITFVAVILLLNYCVSIPNYQLSS
CEEEEEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
NVPQIEKNREAKLISAFFGLDNSLPWRSFLLWRNAPGKDGMPLVFSHEIDPTTVDLSDFQ
CCCCHHCCCHHHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCEEEECCCCCCEEECCCEE
ITTKKGEIFYPLFATFVPSLEQFELRTILLIGQFGDHPDNEPNEVVIVGELKSRDGQNLI
EEECCCCEEEHHHHHHCCCHHHEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCC
GQKIQVTPLTAGPFISYAEYFRFEDSYPYNTSVHGADCPLLETTVVVRTVWAGGVRAIDG
CCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHEEHHHHCCCEEEECC
QELGDRELKKFKIEMISGSETFTVSPFKIADIDDNDNNIDLCIAEQGIPKSVEVDADTVI
CCCCCHHHEEEEEEEECCCCEEEECCEEEEECCCCCCCEEEEEECCCCCCCEECCCCEEE
DPRGDRNPITKMEILSRW
CCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MEFEINLFIQIRTKQPLSLCKKWKSNRLKTELLMKKRITFVAVILLLNYCVSIPNYQLSS
CEEEEEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
NVPQIEKNREAKLISAFFGLDNSLPWRSFLLWRNAPGKDGMPLVFSHEIDPTTVDLSDFQ
CCCCHHCCCHHHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCEEEECCCCCCEEECCCEE
ITTKKGEIFYPLFATFVPSLEQFELRTILLIGQFGDHPDNEPNEVVIVGELKSRDGQNLI
EEECCCCEEEHHHHHHCCCHHHEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCC
GQKIQVTPLTAGPFISYAEYFRFEDSYPYNTSVHGADCPLLETTVVVRTVWAGGVRAIDG
CCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHEEHHHHCCCEEEECC
QELGDRELKKFKIEMISGSETFTVSPFKIADIDDNDNNIDLCIAEQGIPKSVEVDADTVI
CCCCCHHHEEEEEEEECCCCEEEECCEEEEECCCCCCCEEEEEECCCCCCCEECCCCEEE
DPRGDRNPITKMEILSRW
CCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA