Click here to switch to the map view.

The map label for this gene is 45656790

Identifier: 45656790

GI number: 45656790

Start: 1083716

End: 1084030

Strand: Reverse

Name: 45656790

Synonym: LIC10899

Alternate gene names: NA

Gene position: 1084030-1083716 (Counterclockwise)

Preceding gene: 45656794

Following gene: 45656789

Centisome position: 25.34

GC content: 33.02

Gene sequence:

>315_bases
ATGATTACAAGATTCTTCCCATTCTTATGTGTACTTGCATTACTTTCTTTCAATTTACTCTTCGCAGACACTGTCACAAA
CTCTAAAACAAACGAAGTAATTGAAAACGTTAAAACTTCAGAAAACGAACAAGGGATCATCGTAGAATACCAAGACGGTA
CAAGAAGAGGTTTTAAAAAAGAAGCTGTTACAATTCAAAAAAAAGAAGTTACTTGGGTAAAAGAAGAAGAATCGAAAGAG
GAAACCAAATCAGATCGTTATCTTGCTTTAGGATCGATGGGCTTACTTTTAATCTTATTCTTTATACTTCCATAG

Upstream 100 bases:

>100_bases
TTATCTTTAATACGATTGTAACAATTCTTACGATTTTCCTCTTGTAGTATTGGATACGAATGAGAAGCGAATATCATTCT
CAAAGGATAACGATTACAAT

Downstream 100 bases:

>100_bases
AAAACCATGTTGTTTTACATTTTTTTTCTACAAAAAAACTTCTTTTTAAATTTGATGAAAGTTACGCGAATTATATCAGT
TTGTAACTTATACGTAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MITRFFPFLCVLALLSFNLLFADTVTNSKTNEVIENVKTSENEQGIIVEYQDGTRRGFKKEAVTIQKKEVTWVKEEESKE
ETKSDRYLALGSMGLLLILFFILP

Sequences:

>Translated_104_residues
MITRFFPFLCVLALLSFNLLFADTVTNSKTNEVIENVKTSENEQGIIVEYQDGTRRGFKKEAVTIQKKEVTWVKEEESKE
ETKSDRYLALGSMGLLLILFFILP
>Mature_104_residues
MITRFFPFLCVLALLSFNLLFADTVTNSKTNEVIENVKTSENEQGIIVEYQDGTRRGFKKEAVTIQKKEVTWVKEEESKE
ETKSDRYLALGSMGLLLILFFILP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11954; Mature: 11954

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITRFFPFLCVLALLSFNLLFADTVTNSKTNEVIENVKTSENEQGIIVEYQDGTRRGFKK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCH
EAVTIQKKEVTWVKEEESKEETKSDRYLALGSMGLLLILFFILP
HHEEEECCCCEEECCHHHHHHHCCCCEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MITRFFPFLCVLALLSFNLLFADTVTNSKTNEVIENVKTSENEQGIIVEYQDGTRRGFKK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCH
EAVTIQKKEVTWVKEEESKEETKSDRYLALGSMGLLLILFFILP
HHEEEECCCCEEECCHHHHHHHCCCCEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA