Click here to switch to the map view.

The map label for this gene is 45656715

Identifier: 45656715

GI number: 45656715

Start: 996107

End: 996991

Strand: Reverse

Name: 45656715

Synonym: LIC10824

Alternate gene names: NA

Gene position: 996991-996107 (Counterclockwise)

Preceding gene: 45656719

Following gene: 45656714

Centisome position: 23.31

GC content: 36.95

Gene sequence:

>885_bases
ATGACAAAAAAACTAATACGTTATATTCTATTTTTTGCATGTATTGGAACCTTTAAATCTGGTTTATTTGCTTCCGAACT
TCTTCTTAAATCAGGAGAAGCTTTTTTAATCGAAGAGGTAAACGAAAGCGCGGACGTAGTGAACGTCAGGTGGAAAGGTA
GACAGTTTAGAATTCCAAAATCGGAGATTCAAAGAATTGATTATTCTAAAAAAGGACCTGAATCTTCTTACAATTATTCC
GAATTCCGTTTAACGGATGGTAGTCAAGTCCGTGGAATTATTGTAGAAACTAAAAAAGACAAATTAGTTTTTCGAACCGA
ATTAGGATTTGTAGAAATAGAAAAATCTAAAATTCAAAATTTAAACGAAAACTCTTTAGAAAAAGAAAGTCCAAACTTAC
CTGACAAATATCTTTCGGGTAGATCCGGTGAAAATCTACTCTATGTAGGTGGAAGTCTTTTATTTCAAACTACAATCGGA
CCTTCTCACAAAACGAATCCGGGGGCCGGTGGTGCTGGTCTTTTTATCGAAAAAGGTTTTATCAATCATCCTTTATGGTT
TTTCGGTTTTCTTTCTGAATACTCAGTGGCTCCAGGTGCACAAGGTTCTATTTCTTTTTGGAATCAATCCTTATATGTAG
GAAAACAATTGGGCGCTTCTGCTCCTTACTTTTTGTTTGGAGGCGGAGTAACTTCCGTTCAATGGAAAAACGATTCTCGT
TCTTTGAACGGAACCGATCCGGAACTTTTAGGCGAGTTTGGTTGGGCTTGGGAATTTAACAACGGTTCTCGTTTGCGTCT
TGGAATTCGTTCTCAGTGTACATTAGAATCTGGAGATTCTTTTTGTAGATCCGGGATTCGTATCTCTTGGGGGATTTTGT
TATGA

Upstream 100 bases:

>100_bases
AAAAACTTTTAATTTCATCAAATTTGCAAAAAATATTTATCTATTTACAAGATTAACATACTTCAAACTTCTGGATCATA
ATTTTTCAAGAGATTATAAT

Downstream 100 bases:

>100_bases
ACAAATTTCAAATATTTAGAATATGGGAACTCATACATTTCAAGGTTGTCTCAAAATTTGTAGGCTTCTTTTTAAGAAAA
ATTATTTTGAATTTCTCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MTKKLIRYILFFACIGTFKSGLFASELLLKSGEAFLIEEVNESADVVNVRWKGRQFRIPKSEIQRIDYSKKGPESSYNYS
EFRLTDGSQVRGIIVETKKDKLVFRTELGFVEIEKSKIQNLNENSLEKESPNLPDKYLSGRSGENLLYVGGSLLFQTTIG
PSHKTNPGAGGAGLFIEKGFINHPLWFFGFLSEYSVAPGAQGSISFWNQSLYVGKQLGASAPYFLFGGGVTSVQWKNDSR
SLNGTDPELLGEFGWAWEFNNGSRLRLGIRSQCTLESGDSFCRSGIRISWGILL

Sequences:

>Translated_294_residues
MTKKLIRYILFFACIGTFKSGLFASELLLKSGEAFLIEEVNESADVVNVRWKGRQFRIPKSEIQRIDYSKKGPESSYNYS
EFRLTDGSQVRGIIVETKKDKLVFRTELGFVEIEKSKIQNLNENSLEKESPNLPDKYLSGRSGENLLYVGGSLLFQTTIG
PSHKTNPGAGGAGLFIEKGFINHPLWFFGFLSEYSVAPGAQGSISFWNQSLYVGKQLGASAPYFLFGGGVTSVQWKNDSR
SLNGTDPELLGEFGWAWEFNNGSRLRLGIRSQCTLESGDSFCRSGIRISWGILL
>Mature_293_residues
TKKLIRYILFFACIGTFKSGLFASELLLKSGEAFLIEEVNESADVVNVRWKGRQFRIPKSEIQRIDYSKKGPESSYNYSE
FRLTDGSQVRGIIVETKKDKLVFRTELGFVEIEKSKIQNLNENSLEKESPNLPDKYLSGRSGENLLYVGGSLLFQTTIGP
SHKTNPGAGGAGLFIEKGFINHPLWFFGFLSEYSVAPGAQGSISFWNQSLYVGKQLGASAPYFLFGGGVTSVQWKNDSRS
LNGTDPELLGEFGWAWEFNNGSRLRLGIRSQCTLESGDSFCRSGIRISWGILL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32780; Mature: 32648

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKLIRYILFFACIGTFKSGLFASELLLKSGEAFLIEEVNESADVVNVRWKGRQFRIPK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCEEECCH
SEIQRIDYSKKGPESSYNYSEFRLTDGSQVRGIIVETKKDKLVFRTELGFVEIEKSKIQN
HHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCEEEEEECCEEEEEHHHHCC
LNENSLEKESPNLPDKYLSGRSGENLLYVGGSLLFQTTIGPSHKTNPGAGGAGLFIEKGF
CCCCCCCCCCCCCCHHHHCCCCCCEEEEECCEEEEEEECCCCCCCCCCCCCCEEEEECCC
INHPLWFFGFLSEYSVAPGAQGSISFWNQSLYVGKQLGASAPYFLFGGGVTSVQWKNDSR
CCCCHHHHHHHHHHCCCCCCCCCHHHCCCEEEEHHHHCCCCCEEEECCCEEEEEECCCCC
SLNGTDPELLGEFGWAWEFNNGSRLRLGIRSQCTLESGDSFCRSGIRISWGILL
CCCCCCHHHHHCCCCEEEECCCCEEEEECCCEEEECCCCHHHHCCCEEEEEEEC
>Mature Secondary Structure 
TKKLIRYILFFACIGTFKSGLFASELLLKSGEAFLIEEVNESADVVNVRWKGRQFRIPK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCEEECCH
SEIQRIDYSKKGPESSYNYSEFRLTDGSQVRGIIVETKKDKLVFRTELGFVEIEKSKIQN
HHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCEEEEEECCEEEEEHHHHCC
LNENSLEKESPNLPDKYLSGRSGENLLYVGGSLLFQTTIGPSHKTNPGAGGAGLFIEKGF
CCCCCCCCCCCCCCHHHHCCCCCCEEEEECCEEEEEEECCCCCCCCCCCCCCEEEEECCC
INHPLWFFGFLSEYSVAPGAQGSISFWNQSLYVGKQLGASAPYFLFGGGVTSVQWKNDSR
CCCCHHHHHHHHHHCCCCCCCCCHHHCCCEEEEHHHHCCCCCEEEECCCEEEEEECCCCC
SLNGTDPELLGEFGWAWEFNNGSRLRLGIRSQCTLESGDSFCRSGIRISWGILL
CCCCCCHHHHHCCCCEEEECCCCEEEEECCCEEEECCCCHHHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA