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The map label for this gene is ycbC [C]

Identifier: 45656706

GI number: 45656706

Start: 985885

End: 986661

Strand: Reverse

Name: ycbC [C]

Synonym: LIC10815

Alternate gene names: 45656706

Gene position: 986661-985885 (Counterclockwise)

Preceding gene: 45656709

Following gene: 45656705

Centisome position: 23.07

GC content: 38.48

Gene sequence:

>777_bases
ATGAATTTGTCCACAATCTTATTCTCTATTTCAAAACTCGCCACTCTGATCTTATTCCCTCTGCCCTTGGTTCTTTTGAT
TCTTTTGTTTATGGGTGCAAAACTCAAAAAATGGAAAGAAAAATTTTCCGTTTGGCTTCCAGTTTTGTTTCTTTGGATCT
TATCCACAAGTACGGTTTCCCAAAAACTGATTCAATCTTTAGAAATGTATTATCCTCCAGTTTCTCTGGAACAACTTCCA
AAAGCAGACGTCATACTTGTGTTAGGCGGAATGGTTTCAACGTTAAGCATTCACGACGAACCGGTCGATCTTTTCAACAG
CGCAGAAAGGCTTACCGAAACGGTACGACTTTACAGAGCCAAGAAAGCTCCTAAAATTCTATTCTCCGGAGGTTCCGGAA
ATCTTTTTTATCAAACAGTGCCGGAATCCGAACCGGCGGGCAGATTTCTAAAACAAATGGGAATACCAGATTCCTCTTTG
ATCTTAGAATCCAAAAGTAGAAATACCGCCGAAAACAAAAGTTTTGCCGTAGGACTTCTAAAAGAACACGGTTGGAATTC
GGTGATTTTAGTGACTTCTTCTTTTCATATGAAAAGGTCCGTCGAAATCTTTCAGGAAAATGGAATCACGATCATCCCCT
TCCCTACCGATTTTCGTTCCCAAAAATCAGTTTTAACCTTGGATAATTTCTTTCCCTCCACAGGTTGTCTTGAAAATTCT
ACAATTTCTATTAAGGAATGGATCGGTATTTTGGTTCATAAAATCCGAAATTTATAA

Upstream 100 bases:

>100_bases
GGACTTTACTCTTGAAATGATAATGAAAAAATTCCAAGACCTGTTTAATTTTGAAGACATATTTTTAGGTAATTTTTTAT
TCTTACAATAAGGAGAAGAA

Downstream 100 bases:

>100_bases
CCTAACTTAGATTTGGCGCAAAAAATCTCGATTTGCGAGAGTTCCCACATTTGAAAAGTTCATCTGTAAAATCTCAATTT
GTGAGAGTTCCCACATGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MNLSTILFSISKLATLILFPLPLVLLILLFMGAKLKKWKEKFSVWLPVLFLWILSTSTVSQKLIQSLEMYYPPVSLEQLP
KADVILVLGGMVSTLSIHDEPVDLFNSAERLTETVRLYRAKKAPKILFSGGSGNLFYQTVPESEPAGRFLKQMGIPDSSL
ILESKSRNTAENKSFAVGLLKEHGWNSVILVTSSFHMKRSVEIFQENGITIIPFPTDFRSQKSVLTLDNFFPSTGCLENS
TISIKEWIGILVHKIRNL

Sequences:

>Translated_258_residues
MNLSTILFSISKLATLILFPLPLVLLILLFMGAKLKKWKEKFSVWLPVLFLWILSTSTVSQKLIQSLEMYYPPVSLEQLP
KADVILVLGGMVSTLSIHDEPVDLFNSAERLTETVRLYRAKKAPKILFSGGSGNLFYQTVPESEPAGRFLKQMGIPDSSL
ILESKSRNTAENKSFAVGLLKEHGWNSVILVTSSFHMKRSVEIFQENGITIIPFPTDFRSQKSVLTLDNFFPSTGCLENS
TISIKEWIGILVHKIRNL
>Mature_258_residues
MNLSTILFSISKLATLILFPLPLVLLILLFMGAKLKKWKEKFSVWLPVLFLWILSTSTVSQKLIQSLEMYYPPVSLEQLP
KADVILVLGGMVSTLSIHDEPVDLFNSAERLTETVRLYRAKKAPKILFSGGSGNLFYQTVPESEPAGRFLKQMGIPDSSL
ILESKSRNTAENKSFAVGLLKEHGWNSVILVTSSFHMKRSVEIFQENGITIIPFPTDFRSQKSVLTLDNFFPSTGCLENS
TISIKEWIGILVHKIRNL

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=160, Percent_Identity=29.375, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 29004; Mature: 29004

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSTILFSISKLATLILFPLPLVLLILLFMGAKLKKWKEKFSVWLPVLFLWILSTSTVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKLIQSLEMYYPPVSLEQLPKADVILVLGGMVSTLSIHDEPVDLFNSAERLTETVRLYRA
HHHHHHHHHHCCCCCHHHCCCCCEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
KKAPKILFSGGSGNLFYQTVPESEPAGRFLKQMGIPDSSLILESKSRNTAENKSFAVGLL
CCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCHHEEEECCCCCCCCCCHHEEEHH
KEHGWNSVILVTSSFHMKRSVEIFQENGITIIPFPTDFRSQKSVLTLDNFFPSTGCLENS
HHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCC
TISIKEWIGILVHKIRNL
CEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLSTILFSISKLATLILFPLPLVLLILLFMGAKLKKWKEKFSVWLPVLFLWILSTSTVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKLIQSLEMYYPPVSLEQLPKADVILVLGGMVSTLSIHDEPVDLFNSAERLTETVRLYRA
HHHHHHHHHHCCCCCHHHCCCCCEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
KKAPKILFSGGSGNLFYQTVPESEPAGRFLKQMGIPDSSLILESKSRNTAENKSFAVGLL
CCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCHHEEEECCCCCCCCCCHHEEEHH
KEHGWNSVILVTSSFHMKRSVEIFQENGITIIPFPTDFRSQKSVLTLDNFFPSTGCLENS
HHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCC
TISIKEWIGILVHKIRNL
CEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]