| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is 45656637
Identifier: 45656637
GI number: 45656637
Start: 903042
End: 904640
Strand: Direct
Name: 45656637
Synonym: LIC10741
Alternate gene names: NA
Gene position: 903042-904640 (Clockwise)
Preceding gene: 45656636
Following gene: 45656641
Centisome position: 21.11
GC content: 36.02
Gene sequence:
>1599_bases TTGGCCGATACTAAAAACAAGATGAAATCCAAATTTCTGGATCGTTTGTTATCGATCGGTAAATTTAAGAATTTTTCCAA AAATATAAGAAATATCGCATATAAGATATTCGGCGCCAAATTACGAACTAACTTACAGCGTGTTCAAAAACTTCTCGAGC GATTCATAAAAAACGAGACGTTTAAGTTTATTTTTACTTTCTCAAAAAGATTAAGTCGGATAATTCAATCTTTCACTTCT ATTGGCGCTTTCAAAGCTCAAAGCCTCGTCGTTCAACGGGTTCTGTCTCGATTCTTATTAAAAAATTTGAATCTAAAAAA ATCGTTTTTAATTTGTTTTCTTATTGTATTCATTTTAGTGGAAAATCTATCATCATCTTCCGATCTGCAAATATCACCGG ATATACAAAATATCACCGATTTTAGGACAGATCGTTTAGCATTTCATTTCATTCAACTTGTGGATAAGGAAGGTAAAACC TTGTCCGAAACCAATCCAAATCGGGATTCTTCCGAAGCAACTCTCTTAATTATTTATAAAGGACAACTAACGTTACTTAA GGACGGCTACGACGATCCAAATCAAATTCGAGAAAAGGAAAGGGAATACCTGGTCAAAATTTCCAATTACGTAAGACTGA GAGAGTTAGAATCGGAATATTATAAACTTCCCGAATCGGAGAGGACTGTACATTCAAATCGATCTCAAGACGTAGGTTCC ACTTCTGTAAATAAAACTTCCGATGCTACGCCGGGTTCAAGTTCATCAACTAACACAGGTGAGATGGTTCAAGTTTCCAG CGAACCTTTGAAAAAAACGAAAGAGTTGGATCTTCTTTTAAAATATGATGAAGAGTTATTGAAAAATTATGCTTCTGAAA GAGCTGTAAGTGGGGAACTTGAAAGATCAGAACGTTTTTATGGAAAAGATTCTCCAAAAACGACTACGATTCGTTTTAGG GCGGAAGAACTCAGAAAAAAAGTAAACGAAAGAAGAAACATACTAATCAATTTCCTGAAAAATCCGGGAGCTTCCACCAA TCCATATCCGGGTGATAGAAAAGATCAGGCTTTTTATACAAATACCGTGAATGGTATTCCCGATTTTTATCTACACTCTA CTACTCCTAGGGAACTTGACGGTCAGATGAAAGGAGAAGAAGAAGTCGGCAAAAAATATGGAGAGTTATATAAACTCGCA AGGGATAAGTTAATCGATTCTCAAATTAGAAAATTATACTATTATCTTTGGAATCGGGAAATGACAAACACTCGGGTCAA AGTGGATAAGTGGAAAAAAGGAAAAAAAATAGTGGTAGTTGCTGGGGATTCCACGATTTTTACGATGATCGATAAGGAAG GAGACGGAGTTACGGAATCCTTTTTTGTAGATAGTCCGGGGGTTCGTTTTTCTTGGGGAAGAAATCTTCCGAACGTAATT TCCATTTCTAATTGTACAGACGAAACCATACTTTCTAAAATTAAAAATTTGACCGAGGATGTTTCATCCGGTAGAGTTCC GGAAAAAGTAGATAAAATCGATCTTACGGTTCCAGAAGAACAATTGGTGATCGAACTCGGACCTAAGATTCCACAGTAA
Upstream 100 bases:
>100_bases GAATATAGGTTAGACGGGTTATCCGAAAACATCTCCGGAATGGAATATTCTCTCGATTTATCACATAAAAGGAATTGATT CACTTTTCTCGTCTGTTTTT
Downstream 100 bases:
>100_bases TACTGAAAGCTTGTTCAAACAAAACCTAAAAATTACAAAGGTTTTATGGTGGAAGAATTGCTAGAAAGTTCGCAAATGTA AGAGTAATATTTTTTAGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MADTKNKMKSKFLDRLLSIGKFKNFSKNIRNIAYKIFGAKLRTNLQRVQKLLERFIKNETFKFIFTFSKRLSRIIQSFTS IGAFKAQSLVVQRVLSRFLLKNLNLKKSFLICFLIVFILVENLSSSSDLQISPDIQNITDFRTDRLAFHFIQLVDKEGKT LSETNPNRDSSEATLLIIYKGQLTLLKDGYDDPNQIREKEREYLVKISNYVRLRELESEYYKLPESERTVHSNRSQDVGS TSVNKTSDATPGSSSSTNTGEMVQVSSEPLKKTKELDLLLKYDEELLKNYASERAVSGELERSERFYGKDSPKTTTIRFR AEELRKKVNERRNILINFLKNPGASTNPYPGDRKDQAFYTNTVNGIPDFYLHSTTPRELDGQMKGEEEVGKKYGELYKLA RDKLIDSQIRKLYYYLWNREMTNTRVKVDKWKKGKKIVVVAGDSTIFTMIDKEGDGVTESFFVDSPGVRFSWGRNLPNVI SISNCTDETILSKIKNLTEDVSSGRVPEKVDKIDLTVPEEQLVIELGPKIPQ
Sequences:
>Translated_532_residues MADTKNKMKSKFLDRLLSIGKFKNFSKNIRNIAYKIFGAKLRTNLQRVQKLLERFIKNETFKFIFTFSKRLSRIIQSFTS IGAFKAQSLVVQRVLSRFLLKNLNLKKSFLICFLIVFILVENLSSSSDLQISPDIQNITDFRTDRLAFHFIQLVDKEGKT LSETNPNRDSSEATLLIIYKGQLTLLKDGYDDPNQIREKEREYLVKISNYVRLRELESEYYKLPESERTVHSNRSQDVGS TSVNKTSDATPGSSSSTNTGEMVQVSSEPLKKTKELDLLLKYDEELLKNYASERAVSGELERSERFYGKDSPKTTTIRFR AEELRKKVNERRNILINFLKNPGASTNPYPGDRKDQAFYTNTVNGIPDFYLHSTTPRELDGQMKGEEEVGKKYGELYKLA RDKLIDSQIRKLYYYLWNREMTNTRVKVDKWKKGKKIVVVAGDSTIFTMIDKEGDGVTESFFVDSPGVRFSWGRNLPNVI SISNCTDETILSKIKNLTEDVSSGRVPEKVDKIDLTVPEEQLVIELGPKIPQ >Mature_531_residues ADTKNKMKSKFLDRLLSIGKFKNFSKNIRNIAYKIFGAKLRTNLQRVQKLLERFIKNETFKFIFTFSKRLSRIIQSFTSI GAFKAQSLVVQRVLSRFLLKNLNLKKSFLICFLIVFILVENLSSSSDLQISPDIQNITDFRTDRLAFHFIQLVDKEGKTL SETNPNRDSSEATLLIIYKGQLTLLKDGYDDPNQIREKEREYLVKISNYVRLRELESEYYKLPESERTVHSNRSQDVGST SVNKTSDATPGSSSSTNTGEMVQVSSEPLKKTKELDLLLKYDEELLKNYASERAVSGELERSERFYGKDSPKTTTIRFRA EELRKKVNERRNILINFLKNPGASTNPYPGDRKDQAFYTNTVNGIPDFYLHSTTPRELDGQMKGEEEVGKKYGELYKLAR DKLIDSQIRKLYYYLWNREMTNTRVKVDKWKKGKKIVVVAGDSTIFTMIDKEGDGVTESFFVDSPGVRFSWGRNLPNVIS ISNCTDETILSKIKNLTEDVSSGRVPEKVDKIDLTVPEEQLVIELGPKIPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61215; Mature: 61084
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTKNKMKSKFLDRLLSIGKFKNFSKNIRNIAYKIFGAKLRTNLQRVQKLLERFIKNET CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH FKFIFTFSKRLSRIIQSFTSIGAFKAQSLVVQRVLSRFLLKNLNLKKSFLICFLIVFILV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ENLSSSSDLQISPDIQNITDFRTDRLAFHFIQLVDKEGKTLSETNPNRDSSEATLLIIYK HHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEC GQLTLLKDGYDDPNQIREKEREYLVKISNYVRLRELESEYYKLPESERTVHSNRSQDVGS CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCC TSVNKTSDATPGSSSSTNTGEMVQVSSEPLKKTKELDLLLKYDEELLKNYASERAVSGEL CCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH ERSERFYGKDSPKTTTIRFRAEELRKKVNERRNILINFLKNPGASTNPYPGDRKDQAFYT HHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE NTVNGIPDFYLHSTTPRELDGQMKGEEEVGKKYGELYKLARDKLIDSQIRKLYYYLWNRE CCCCCCCCCEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC MTNTRVKVDKWKKGKKIVVVAGDSTIFTMIDKEGDGVTESFFVDSPGVRFSWGRNLPNVI CCCCEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEECCCCCEEECCCCCCCEE SISNCTDETILSKIKNLTEDVSSGRVPEKVDKIDLTVPEEQLVIELGPKIPQ EECCCCHHHHHHHHHHHHHHHHCCCCCCHHCCEECCCCHHHEEEEECCCCCC >Mature Secondary Structure ADTKNKMKSKFLDRLLSIGKFKNFSKNIRNIAYKIFGAKLRTNLQRVQKLLERFIKNET CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH FKFIFTFSKRLSRIIQSFTSIGAFKAQSLVVQRVLSRFLLKNLNLKKSFLICFLIVFILV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ENLSSSSDLQISPDIQNITDFRTDRLAFHFIQLVDKEGKTLSETNPNRDSSEATLLIIYK HHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEC GQLTLLKDGYDDPNQIREKEREYLVKISNYVRLRELESEYYKLPESERTVHSNRSQDVGS CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCC TSVNKTSDATPGSSSSTNTGEMVQVSSEPLKKTKELDLLLKYDEELLKNYASERAVSGEL CCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH ERSERFYGKDSPKTTTIRFRAEELRKKVNERRNILINFLKNPGASTNPYPGDRKDQAFYT HHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE NTVNGIPDFYLHSTTPRELDGQMKGEEEVGKKYGELYKLARDKLIDSQIRKLYYYLWNRE CCCCCCCCCEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC MTNTRVKVDKWKKGKKIVVVAGDSTIFTMIDKEGDGVTESFFVDSPGVRFSWGRNLPNVI CCCCEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEECCCCCEEECCCCCCCEE SISNCTDETILSKIKNLTEDVSSGRVPEKVDKIDLTVPEEQLVIELGPKIPQ EECCCCHHHHHHHHHHHHHHHHCCCCCCHHCCEECCCCHHHEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA