Click here to switch to the map view.

The map label for this gene is 45656630

Identifier: 45656630

GI number: 45656630

Start: 896198

End: 896992

Strand: Direct

Name: 45656630

Synonym: LIC10734

Alternate gene names: NA

Gene position: 896198-896992 (Clockwise)

Preceding gene: 45656629

Following gene: 45656633

Centisome position: 20.95

GC content: 33.33

Gene sequence:

>795_bases
ATGAAACTTATTTTAACTTTTGCTAATAAATTTCGAAAACGAATTTTAACATTAATCCAATCCTTAAGATTTTTTTTAAA
ATTAGCTTTGATCGTATTTGGTGTTTCCAGTTGTGTATATGCAGATACTATACCTTCTAAGGTGAATGAAATTGCACTTC
CGTCGGAAAGTACACGGGTTCGGTTTAAAAAAAATTCTTTTCCGGATTTTGTACAAAATCTTCCGTTAAAATCGGATCGA
ACTCTTTGGACATATAAAAAAGAGAATATCATTCGACGTTATGATACAATTGCAATTTTAGACGTTCCACTTTTGTTTCA
GAGTGATTTAGAGCAATGCGCGGATTATACGATGCGTATATGGGCAGAATATCATAAACAAAACAACCATTTAAATCGGC
TGTATCTTTTTGATTATAATGGAAATCAAAAGTTTTTTTCCAAAAGCGGACTTTCTTACTTTTCCTTCTTGAGAAAAGCG
TTCGCGTCTTCCAACTCGTATTCTATTAAAAAAGGTGGAAAAATTATTTCGGAAACGGATTTAAAACCAGGAGATTTGTT
TGTCCAGAATGAAACTGGAGGAATTGGACACGTCTCTATGATTTTAGATTTAGCAGAAAATCGAAAAGGAGAAAAATTCT
TTTTGATTGGATTCAGTTTTATGCCAGCTCAGGAAATGCATATTGAAAGAGCACCTAAAGAATTTGGTTCTCGGGGCTGG
TTTACCTATTCCGGTTTTATTTCTCATCTGAAAGAATCGTATCCATATGGGCATTCTGTTTTGAGAAGATTTTAG

Upstream 100 bases:

>100_bases
AATTAATGTTGCATTATTCTATAAGATTGTAAGAACGATAGTTATTTAGAAAAAAATAGATTTAACGGATCGTTTTTGTC
CTTCTTAAAAAAGAATTATA

Downstream 100 bases:

>100_bases
AATTGTAATTTGTAAGCTTATCGAACTTTTATTTTTAATATTATAAATTTTTAATGTATTTGTGTGAGACGGTTTTTTGG
ATGTATGACGCCGTTTGAAA

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MKLILTFANKFRKRILTLIQSLRFFLKLALIVFGVSSCVYADTIPSKVNEIALPSESTRVRFKKNSFPDFVQNLPLKSDR
TLWTYKKENIIRRYDTIAILDVPLLFQSDLEQCADYTMRIWAEYHKQNNHLNRLYLFDYNGNQKFFSKSGLSYFSFLRKA
FASSNSYSIKKGGKIISETDLKPGDLFVQNETGGIGHVSMILDLAENRKGEKFFLIGFSFMPAQEMHIERAPKEFGSRGW
FTYSGFISHLKESYPYGHSVLRRF

Sequences:

>Translated_264_residues
MKLILTFANKFRKRILTLIQSLRFFLKLALIVFGVSSCVYADTIPSKVNEIALPSESTRVRFKKNSFPDFVQNLPLKSDR
TLWTYKKENIIRRYDTIAILDVPLLFQSDLEQCADYTMRIWAEYHKQNNHLNRLYLFDYNGNQKFFSKSGLSYFSFLRKA
FASSNSYSIKKGGKIISETDLKPGDLFVQNETGGIGHVSMILDLAENRKGEKFFLIGFSFMPAQEMHIERAPKEFGSRGW
FTYSGFISHLKESYPYGHSVLRRF
>Mature_264_residues
MKLILTFANKFRKRILTLIQSLRFFLKLALIVFGVSSCVYADTIPSKVNEIALPSESTRVRFKKNSFPDFVQNLPLKSDR
TLWTYKKENIIRRYDTIAILDVPLLFQSDLEQCADYTMRIWAEYHKQNNHLNRLYLFDYNGNQKFFSKSGLSYFSFLRKA
FASSNSYSIKKGGKIISETDLKPGDLFVQNETGGIGHVSMILDLAENRKGEKFFLIGFSFMPAQEMHIERAPKEFGSRGW
FTYSGFISHLKESYPYGHSVLRRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30706; Mature: 30706

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLILTFANKFRKRILTLIQSLRFFLKLALIVFGVSSCVYADTIPSKVNEIALPSESTRV
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEE
RFKKNSFPDFVQNLPLKSDRTLWTYKKENIIRRYDTIAILDVPLLFQSDLEQCADYTMRI
EEECCCCHHHHHCCCCCCCCEEEEEHHHHHHHHHCEEEEEEEHHHHHHHHHHHHHHHHHH
WAEYHKQNNHLNRLYLFDYNGNQKFFSKSGLSYFSFLRKAFASSNSYSIKKGGKIISETD
HHHHHHCCCCCEEEEEEEECCCCHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCEEECCC
LKPGDLFVQNETGGIGHVSMILDLAENRKGEKFFLIGFSFMPAQEMHIERAPKEFGSRGW
CCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHCHHHHCCCCC
FTYSGFISHLKESYPYGHSVLRRF
EEHHHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure
MKLILTFANKFRKRILTLIQSLRFFLKLALIVFGVSSCVYADTIPSKVNEIALPSESTRV
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEE
RFKKNSFPDFVQNLPLKSDRTLWTYKKENIIRRYDTIAILDVPLLFQSDLEQCADYTMRI
EEECCCCHHHHHCCCCCCCCEEEEEHHHHHHHHHCEEEEEEEHHHHHHHHHHHHHHHHHH
WAEYHKQNNHLNRLYLFDYNGNQKFFSKSGLSYFSFLRKAFASSNSYSIKKGGKIISETD
HHHHHHCCCCCEEEEEEEECCCCHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCEEECCC
LKPGDLFVQNETGGIGHVSMILDLAENRKGEKFFLIGFSFMPAQEMHIERAPKEFGSRGW
CCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHCHHHHCCCCC
FTYSGFISHLKESYPYGHSVLRRF
EEHHHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA