Click here to switch to the map view.

The map label for this gene is 45656614

Identifier: 45656614

GI number: 45656614

Start: 870259

End: 870606

Strand: Reverse

Name: 45656614

Synonym: LIC10716

Alternate gene names: NA

Gene position: 870606-870259 (Counterclockwise)

Preceding gene: 45656615

Following gene: 45656612

Centisome position: 20.35

GC content: 35.92

Gene sequence:

>348_bases
ATGGATTTACGAATCATGAAATTTTTTTCAATCCTAACAATTTTAATCTGGCTTGTGTTTGCGGGACTTCAATGGAACGA
TCCCGATCCTTGGCTTTGGATTTCAATTTACATGAGTGTTGTTGTACTATATGCAGGTTTCATAATATATCCAACAAAAA
TGAAAATTTGGTTTCACGTCTCTTGGGTTCTTTCCGTTCTTTTTCTTGCCGGAACAATATTCGCCGCAACGCTGATCCCA
AACTTTTCTTTTGACGACGAAGTCACAAGAGAAACTGGAGGCCTGATTTTATCTACGATTTGGTCCGGAATTTTAGGTTA
TTGGATTTATAAAAAAAATCCAAATTAA

Upstream 100 bases:

>100_bases
CTTTGATTGCTGATTTAGATCTGGACCTTTTAAAAGAACTTCGTAAAAAAGGTTCTGTTCGCAATCTTTCCAATCGAAGA
AAAGATCTTTACGAACTAAA

Downstream 100 bases:

>100_bases
GTCGAGCGTGATTTTTGGGAACTCTGCATCTTTGTAAGATTGATCTTTAATTTTGGGAACTATTTCCATACGTCCGAATA
GTAAAATTGCAGTATTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MDLRIMKFFSILTILIWLVFAGLQWNDPDPWLWISIYMSVVVLYAGFIIYPTKMKIWFHVSWVLSVLFLAGTIFAATLIP
NFSFDDEVTRETGGLILSTIWSGILGYWIYKKNPN

Sequences:

>Translated_115_residues
MDLRIMKFFSILTILIWLVFAGLQWNDPDPWLWISIYMSVVVLYAGFIIYPTKMKIWFHVSWVLSVLFLAGTIFAATLIP
NFSFDDEVTRETGGLILSTIWSGILGYWIYKKNPN
>Mature_115_residues
MDLRIMKFFSILTILIWLVFAGLQWNDPDPWLWISIYMSVVVLYAGFIIYPTKMKIWFHVSWVLSVLFLAGTIFAATLIP
NFSFDDEVTRETGGLILSTIWSGILGYWIYKKNPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13401; Mature: 13401

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRIMKFFSILTILIWLVFAGLQWNDPDPWLWISIYMSVVVLYAGFIIYPTKMKIWFHV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHEEEH
SWVLSVLFLAGTIFAATLIPNFSFDDEVTRETGGLILSTIWSGILGYWIYKKNPN
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHEECCCC
>Mature Secondary Structure
MDLRIMKFFSILTILIWLVFAGLQWNDPDPWLWISIYMSVVVLYAGFIIYPTKMKIWFHV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHEEEH
SWVLSVLFLAGTIFAATLIPNFSFDDEVTRETGGLILSTIWSGILGYWIYKKNPN
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA