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The map label for this gene is 45656610

Identifier: 45656610

GI number: 45656610

Start: 859396

End: 860907

Strand: Reverse

Name: 45656610

Synonym: LIC10712

Alternate gene names: NA

Gene position: 860907-859396 (Counterclockwise)

Preceding gene: 45656611

Following gene: 45656609

Centisome position: 20.13

GC content: 43.19

Gene sequence:

>1512_bases
ATGAAAATTAAAAGATCTTCAACGCGGGGAATATTGATTCCCCGCAAAATTTCAGTATATTCTAAAATTCAAATAGGATT
TCTAATCGGAATCCTATTCTGTTTATTGACTCAGTGTAACCTCAAAATTTTTGACCATAAAAAAAACAACAACCAAGAAC
TGGCGATCCTGTTGTTACTACTCGCCTATATGGATCCGGGAGAACAATACTCCGGAGGTTACACTACTACCTTTGATACC
ACGGTAAATGCTTTCGACCTCGCCGCCTCAAATTTGAGAGAAGGTGGAAACATAGAATTTCAAGGCGGAAATTCATTTTT
CAATCGTACCTGGGTTCAAGGAGGTAATTCCGCTTCCGACGGACTGGGGCCGGTTTTTAACAGTACCGCCTGTAACGGTT
GTCACGTAAAAGACGGGAGAGGAACTCCCCCACCGGATGGAAGTAACGTTTTTTCTACCATGTTGATTCGAGTCAGCAAA
GATGGAAAAGACCCGACTACGGGTGGTCCGGTTGGACTCGACAATTACGGACTTCAGATCAATAACCGAGGAATCCCGGG
AGTTCAAGCTGAGGCGACTACTACCGTAAACTTTGCGGAAGAACCTGGAAGTTTTCCAGATGGAGAAACCTATTCTCTGA
GAAGACCTACATTCACAATTTCAAATTGGAATTTCGGAGCGCCCGCGCTTGTACATCAATCTCCTCGAACGTCTCCCATG
ATTCCGGGACTCGGACTTTTAGAAGCGATTCCGGAATCTACGATCCTTTCTTTTGCTGATGAAAACGATTCAGACGGAGA
TGGAATATCAGGAAAACCGAATCTAGTTTGGGATGCAAAATTACAAAAGAAAGTTTTAGGTAGATTTGGTTGGAAGGCAA
ACGAACCCACTTTATTCCAACAAAACCAAGGTGCATTTTTAGGAGATATAGGAATTACAAGTCCTCTGTTTCCTAATCAA
AACTGTGTCGGTGCACAAGCCGCCTGTTTTGCCGCTCCCGCCGGTAATAATGGAAATCCAGAAGGAACTGAAATTTCCAA
TAGAACCGCAGAGTTAGTAACCTTTTACACCAAACTCTTAGGAGTTCCAGGTAGAAGAAACTGGACTCAACCAGACGTAG
TTAGAGGGAAAGAAATTTTTTCCCAAATCGGTTGTAACGCTTGTCACAAACCTCATATCTTTACCGGATATTCGGAAGGG
TTTCCTGAAATTTCGTTTCAACATATCAAACCGTATACGGATCTTTTATTACACGACATGGGACCCGATCTTGCAGACAA
TAGAGAAGATTTTGAAGCTTCGGGAACAGAATGGAGAACTCCTCCTCTCTGGGGAACGGGCCTTATACAAAAGGTCAACG
GCCACAATCATCTTCTTCACGACGGACGCGCGAGAGGCCATAAAGAAGCGATTCTTTGGCACGGAGGTGAGGCTTTGACG
TCCAGAAATAAGTTCGTAAACCTTCCAAAAGACGATAGAGATAAGTTGATTTTATTTCTGGAATCTTTATGA

Upstream 100 bases:

>100_bases
AAAATGAAAAAGACGATCACCGATGCCGCAAAAACTATAGGAATTTCTATCACGGACTTTTCAATTTAAGTTAAAAAATA
AAATATGAATATGAGAAAAA

Downstream 100 bases:

>100_bases
GAATTTTAGAATTTACGAATATGTCTTTTAGAAAGGCCTGGTTCCTCAAAAGGATTACAGTTTTTTTTCTGAGTCTTGCC
GTCTTATTACCGGGCATACG

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; Thiol Oxidoreductase-Like; Exported Protein; Signal Peptide; Thiol Oxidoreductase-Like Protein

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MKIKRSSTRGILIPRKISVYSKIQIGFLIGILFCLLTQCNLKIFDHKKNNNQELAILLLLLAYMDPGEQYSGGYTTTFDT
TVNAFDLAASNLREGGNIEFQGGNSFFNRTWVQGGNSASDGLGPVFNSTACNGCHVKDGRGTPPPDGSNVFSTMLIRVSK
DGKDPTTGGPVGLDNYGLQINNRGIPGVQAEATTTVNFAEEPGSFPDGETYSLRRPTFTISNWNFGAPALVHQSPRTSPM
IPGLGLLEAIPESTILSFADENDSDGDGISGKPNLVWDAKLQKKVLGRFGWKANEPTLFQQNQGAFLGDIGITSPLFPNQ
NCVGAQAACFAAPAGNNGNPEGTEISNRTAELVTFYTKLLGVPGRRNWTQPDVVRGKEIFSQIGCNACHKPHIFTGYSEG
FPEISFQHIKPYTDLLLHDMGPDLADNREDFEASGTEWRTPPLWGTGLIQKVNGHNHLLHDGRARGHKEAILWHGGEALT
SRNKFVNLPKDDRDKLILFLESL

Sequences:

>Translated_503_residues
MKIKRSSTRGILIPRKISVYSKIQIGFLIGILFCLLTQCNLKIFDHKKNNNQELAILLLLLAYMDPGEQYSGGYTTTFDT
TVNAFDLAASNLREGGNIEFQGGNSFFNRTWVQGGNSASDGLGPVFNSTACNGCHVKDGRGTPPPDGSNVFSTMLIRVSK
DGKDPTTGGPVGLDNYGLQINNRGIPGVQAEATTTVNFAEEPGSFPDGETYSLRRPTFTISNWNFGAPALVHQSPRTSPM
IPGLGLLEAIPESTILSFADENDSDGDGISGKPNLVWDAKLQKKVLGRFGWKANEPTLFQQNQGAFLGDIGITSPLFPNQ
NCVGAQAACFAAPAGNNGNPEGTEISNRTAELVTFYTKLLGVPGRRNWTQPDVVRGKEIFSQIGCNACHKPHIFTGYSEG
FPEISFQHIKPYTDLLLHDMGPDLADNREDFEASGTEWRTPPLWGTGLIQKVNGHNHLLHDGRARGHKEAILWHGGEALT
SRNKFVNLPKDDRDKLILFLESL
>Mature_503_residues
MKIKRSSTRGILIPRKISVYSKIQIGFLIGILFCLLTQCNLKIFDHKKNNNQELAILLLLLAYMDPGEQYSGGYTTTFDT
TVNAFDLAASNLREGGNIEFQGGNSFFNRTWVQGGNSASDGLGPVFNSTACNGCHVKDGRGTPPPDGSNVFSTMLIRVSK
DGKDPTTGGPVGLDNYGLQINNRGIPGVQAEATTTVNFAEEPGSFPDGETYSLRRPTFTISNWNFGAPALVHQSPRTSPM
IPGLGLLEAIPESTILSFADENDSDGDGISGKPNLVWDAKLQKKVLGRFGWKANEPTLFQQNQGAFLGDIGITSPLFPNQ
NCVGAQAACFAAPAGNNGNPEGTEISNRTAELVTFYTKLLGVPGRRNWTQPDVVRGKEIFSQIGCNACHKPHIFTGYSEG
FPEISFQHIKPYTDLLLHDMGPDLADNREDFEASGTEWRTPPLWGTGLIQKVNGHNHLLHDGRARGHKEAILWHGGEALT
SRNKFVNLPKDDRDKLILFLESL

Specific function: Unknown

COG id: COG3488

COG function: function code C; Predicted thiol oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54836; Mature: 54836

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKRSSTRGILIPRKISVYSKIQIGFLIGILFCLLTQCNLKIFDHKKNNNQELAILLLL
CCCCCCCCCCEEECCEECHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHH
LAYMDPGEQYSGGYTTTFDTTVNAFDLAASNLREGGNIEFQGGNSFFNRTWVQGGNSASD
HHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHCCCCCCCCC
GLGPVFNSTACNGCHVKDGRGTPPPDGSNVFSTMLIRVSKDGKDPTTGGPVGLDNYGLQI
CCCCCCCCCCCCCCEECCCCCCCCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCCCCEEE
NNRGIPGVQAEATTTVNFAEEPGSFPDGETYSLRRPTFTISNWNFGAPALVHQSPRTSPM
CCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCEEEECCCCCCCCHHEECCCCCCCC
IPGLGLLEAIPESTILSFADENDSDGDGISGKPNLVWDAKLQKKVLGRFGWKANEPTLFQ
CCCCHHHHHCCCHHEEEECCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCEEEE
QNQGAFLGDIGITSPLFPNQNCVGAQAACFAAPAGNNGNPEGTEISNRTAELVTFYTKLL
CCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
GVPGRRNWTQPDVVRGKEIFSQIGCNACHKPHIFTGYSEGFPEISFQHIKPYTDLLLHDM
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHCCHHHHHHHHHC
GPDLADNREDFEASGTEWRTPPLWGTGLIQKVNGHNHLLHDGRARGHKEAILWHGGEALT
CCCCCCCCHHHCCCCCCCCCCCCCCCCHHEEECCCCCEECCCCCCCCCEEEEEECCHHHH
SRNKFVNLPKDDRDKLILFLESL
CCCCEEECCCCCCCEEEEEEECC
>Mature Secondary Structure
MKIKRSSTRGILIPRKISVYSKIQIGFLIGILFCLLTQCNLKIFDHKKNNNQELAILLLL
CCCCCCCCCCEEECCEECHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHH
LAYMDPGEQYSGGYTTTFDTTVNAFDLAASNLREGGNIEFQGGNSFFNRTWVQGGNSASD
HHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHCCCCCCCCC
GLGPVFNSTACNGCHVKDGRGTPPPDGSNVFSTMLIRVSKDGKDPTTGGPVGLDNYGLQI
CCCCCCCCCCCCCCEECCCCCCCCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCCCCEEE
NNRGIPGVQAEATTTVNFAEEPGSFPDGETYSLRRPTFTISNWNFGAPALVHQSPRTSPM
CCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCEEEECCCCCCCCHHEECCCCCCCC
IPGLGLLEAIPESTILSFADENDSDGDGISGKPNLVWDAKLQKKVLGRFGWKANEPTLFQ
CCCCHHHHHCCCHHEEEECCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCEEEE
QNQGAFLGDIGITSPLFPNQNCVGAQAACFAAPAGNNGNPEGTEISNRTAELVTFYTKLL
CCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
GVPGRRNWTQPDVVRGKEIFSQIGCNACHKPHIFTGYSEGFPEISFQHIKPYTDLLLHDM
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHCCHHHHHHHHHC
GPDLADNREDFEASGTEWRTPPLWGTGLIQKVNGHNHLLHDGRARGHKEAILWHGGEALT
CCCCCCCCHHHCCCCCCCCCCCCCCCCHHEEECCCCCEECCCCCCCCCEEEEEECCHHHH
SRNKFVNLPKDDRDKLILFLESL
CCCCEEECCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA