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The map label for this gene is 45656571

Identifier: 45656571

GI number: 45656571

Start: 817830

End: 818966

Strand: Reverse

Name: 45656571

Synonym: LIC10673

Alternate gene names: NA

Gene position: 818966-817830 (Counterclockwise)

Preceding gene: 45656572

Following gene: 45656570

Centisome position: 19.15

GC content: 35.09

Gene sequence:

>1137_bases
ATGAACCATTTTTTGTATTTGAACCCAGTTCGTTTACGATTCTATAAACTCAGTTGTTCAAACCTGATTTTAAATCGCAT
TTTAAACGATTTAAAAAAAATCAATTTTTCTTTCTTTCAATTCGTTTTTCATTCCTACTTTCAGAAGATCCTTTTTTATT
TCTTATTCGTTTTTGCTTTTACTGATCAGACAATCGAAGCACAAATACAAATCGGAGGACAATACTATTCCGGATTACTC
TGGGGAGAAAACGAGATACTTTCCCCCGAGTATTATAACAACGGTTCCTTTTTAAGAACGGAACAAGACTTTATACTGAC
TGCGGGAAGAAATTGGAAAGGGGACCCACCTCTTTCCCAAGGAAGTTTTCAATTTGAAGGAAAAGAAATTCTAAACTCAG
GTCTTTTTAATAATGAAGCAGTATCTCTATTAGAAAAAGGAAAAACCGAAGATAGGCTCAAAGCGATTACTATGCTCGAA
GAAGGAGTTCGATTCGATCCAAAATTTTTTCCATTTCGATACAACTTAGGAAGAGCATATCATCTGGAAAAAAAATATCA
GAAATCCATTATCCAATTTGAATATGCAAGCTCTGAAATTCCTGAATATTATAGAACCTTTATTCATTTAGGAACATTAT
ACGAAATCATGAGAGAACCGATCAATGCGACGATTTTATGGAAAAAAGCGGTTAGTCTTAATAAATTTCATACGGAAGCG
TTACTACTTTTAGCAGACCACTACATTCGAACCGATCTCAGAAATCGTGCATTGATCTATATCAAAGAAGCTGCAAAAAT
AGACGAACAAAGCCCAGACGCAAGATTGGGAAAAGCCAGAATCGAACTACTCTCTTCCAAAGATCTATACGCCTACAGAA
TATTTAAGAATACCGAACTTGTGGATGATTTAGGACAAAAGAAACAATATAATAAAAAGTTTCATTTCTACTATGCCGAA
ACCGCCAGTAAAGTAGGCGATTATGTCACAGCTGCAGATCAATACGAACAACTTCTGAAATATCCGAACGATCCATTCTT
TTCCGAATTTTCATATAAGGTGATCGAAAGAAGAAGGGATCTCGCACAACGTTTCGCCGAAATCAAGTCCTTGGAAGAAG
AAAATAAAAACGAATGA

Upstream 100 bases:

>100_bases
AATTACCGGCAAGTCCTCACATTTTAGAATCGATTTTAAAATTACGTGAGGGTTCCGCGTTTTAAAAAACCGAAAATCCA
GAAAGTTTTGGCTTAAAGTT

Downstream 100 bases:

>100_bases
AAAAGGTTTGCTTTTTTCAATTTTCTTCCTTTATCTTGAACGTGGAGGAATTTATGAAAAAAATCACCTGGCTCACAATC
TTGTTTATCCTCCTTAACGT

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; TPR Repeat-Containing Signal Peptide

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MNHFLYLNPVRLRFYKLSCSNLILNRILNDLKKINFSFFQFVFHSYFQKILFYFLFVFAFTDQTIEAQIQIGGQYYSGLL
WGENEILSPEYYNNGSFLRTEQDFILTAGRNWKGDPPLSQGSFQFEGKEILNSGLFNNEAVSLLEKGKTEDRLKAITMLE
EGVRFDPKFFPFRYNLGRAYHLEKKYQKSIIQFEYASSEIPEYYRTFIHLGTLYEIMREPINATILWKKAVSLNKFHTEA
LLLLADHYIRTDLRNRALIYIKEAAKIDEQSPDARLGKARIELLSSKDLYAYRIFKNTELVDDLGQKKQYNKKFHFYYAE
TASKVGDYVTAADQYEQLLKYPNDPFFSEFSYKVIERRRDLAQRFAEIKSLEEENKNE

Sequences:

>Translated_378_residues
MNHFLYLNPVRLRFYKLSCSNLILNRILNDLKKINFSFFQFVFHSYFQKILFYFLFVFAFTDQTIEAQIQIGGQYYSGLL
WGENEILSPEYYNNGSFLRTEQDFILTAGRNWKGDPPLSQGSFQFEGKEILNSGLFNNEAVSLLEKGKTEDRLKAITMLE
EGVRFDPKFFPFRYNLGRAYHLEKKYQKSIIQFEYASSEIPEYYRTFIHLGTLYEIMREPINATILWKKAVSLNKFHTEA
LLLLADHYIRTDLRNRALIYIKEAAKIDEQSPDARLGKARIELLSSKDLYAYRIFKNTELVDDLGQKKQYNKKFHFYYAE
TASKVGDYVTAADQYEQLLKYPNDPFFSEFSYKVIERRRDLAQRFAEIKSLEEENKNE
>Mature_378_residues
MNHFLYLNPVRLRFYKLSCSNLILNRILNDLKKINFSFFQFVFHSYFQKILFYFLFVFAFTDQTIEAQIQIGGQYYSGLL
WGENEILSPEYYNNGSFLRTEQDFILTAGRNWKGDPPLSQGSFQFEGKEILNSGLFNNEAVSLLEKGKTEDRLKAITMLE
EGVRFDPKFFPFRYNLGRAYHLEKKYQKSIIQFEYASSEIPEYYRTFIHLGTLYEIMREPINATILWKKAVSLNKFHTEA
LLLLADHYIRTDLRNRALIYIKEAAKIDEQSPDARLGKARIELLSSKDLYAYRIFKNTELVDDLGQKKQYNKKFHFYYAE
TASKVGDYVTAADQYEQLLKYPNDPFFSEFSYKVIERRRDLAQRFAEIKSLEEENKNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44805; Mature: 44805

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHFLYLNPVRLRFYKLSCSNLILNRILNDLKKINFSFFQFVFHSYFQKILFYFLFVFAF
CCCEEEECCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDQTIEAQIQIGGQYYSGLLWGENEILSPEYYNNGSFLRTEQDFILTAGRNWKGDPPLSQ
CCCCEEEEEEECCEEECCEEECCCCCCCCCEECCCCEEEECCCEEEECCCCCCCCCCCCC
GSFQFEGKEILNSGLFNNEAVSLLEKGKTEDRLKAITMLEEGVRFDPKFFPFRYNLGRAY
CCCCCCCHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCEE
HLEKKYQKSIIQFEYASSEIPEYYRTFIHLGTLYEIMREPINATILWKKAVSLNKFHTEA
HHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHH
LLLLADHYIRTDLRNRALIYIKEAAKIDEQSPDARLGKARIELLSSKDLYAYRIFKNTEL
HHHHHHHHHHHHHCCCEEEEEECHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCHH
VDDLGQKKQYNKKFHFYYAETASKVGDYVTAADQYEQLLKYPNDPFFSEFSYKVIERRRD
HHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LAQRFAEIKSLEEENKNE
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNHFLYLNPVRLRFYKLSCSNLILNRILNDLKKINFSFFQFVFHSYFQKILFYFLFVFAF
CCCEEEECCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDQTIEAQIQIGGQYYSGLLWGENEILSPEYYNNGSFLRTEQDFILTAGRNWKGDPPLSQ
CCCCEEEEEEECCEEECCEEECCCCCCCCCEECCCCEEEECCCEEEECCCCCCCCCCCCC
GSFQFEGKEILNSGLFNNEAVSLLEKGKTEDRLKAITMLEEGVRFDPKFFPFRYNLGRAY
CCCCCCCHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCEE
HLEKKYQKSIIQFEYASSEIPEYYRTFIHLGTLYEIMREPINATILWKKAVSLNKFHTEA
HHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHH
LLLLADHYIRTDLRNRALIYIKEAAKIDEQSPDARLGKARIELLSSKDLYAYRIFKNTEL
HHHHHHHHHHHHHCCCEEEEEECHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCHH
VDDLGQKKQYNKKFHFYYAETASKVGDYVTAADQYEQLLKYPNDPFFSEFSYKVIERRRD
HHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LAQRFAEIKSLEEENKNE
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA