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The map label for this gene is motB

Identifier: 45656521

GI number: 45656521

Start: 761189

End: 762016

Strand: Direct

Name: motB

Synonym: LIC10623

Alternate gene names: 45656521

Gene position: 761189-762016 (Clockwise)

Preceding gene: 45656520

Following gene: 45656522

Centisome position: 17.8

GC content: 39.49

Gene sequence:

>828_bases
ATGGCAAAATCGAAATGTCCGGAATGTATTCAGAATATTCCAGAGTATATGCTTACTTATGGAGACATGGTAACTTTGTT
ACTCTGTTTTTTCATTATGCTTTATACTACTGGAAAAACAAACGCGATCGAAATGCAGATCATCCTTTCCGCGTTTAAAA
CAACAACTGGATTTTTTGACGGAGGTCAGACTCTTTCCAAAGGAAGATTGGAAGAGATGGGAATGAATATAGAAAGTCTT
CCTTCACAAACGACTGGGAAAGCGCTTTCTAAATCAAAACAACTTGCAACTGAACTTTTTAAGCCAGAAGTGGAAGCAGG
AAAAGTAAAGATTACAGAAGATGAAAGAGGTCTTATCATTTCACTTGTAAGTGCGGATTATTTTAATCCTGGTTCTGCAA
TTTTAACGGATTCAATTAAAATTGCTCTTAGAAAAGCGAGCTCGTTGATCAAAGATTTAAATCGTTTTGTAAGAGTGGAA
GGACATTGTGATGCGAACGCCGTCAATCCTGGAGTTGCGCCTGGAAAAGAGGAAAGGGCCTATATCAACAATTGGGATTT
AGCGGGAGCAAGAGCAATCAATTCCACGGACTATATCATTAACGTGGAAAAACTGGACCCATCTTGGTTTCAAGCGGTGA
GTTTCGGAGCCTTTCGACCTTTAGTGGTAGAGTATGCTGGAACACCCGAAGCTAAAGCCTATAATCGAAGAATTGATATA
GTAATTATGACGGAGAAATCCACAAAAAGAAGTCCATACGAAACTAATTACGGACTTCCAAATACTAAAATTCCCGGCTC
GGAATCGAGTGTACCCGGCAAAGAGTGA

Upstream 100 bases:

>100_bases
AGACAATCCTAGAATCGTAAAAGATAAATTGTCTTCGTTTCTTCCTCCTTCGGAAAGAGATGTACTCAAGGACGAAGGCG
AATAGAGTTCAGGTTTTACA

Downstream 100 bases:

>100_bases
TCGGAAGAACGACTAACGTTAAAATTCAGGAGGCAAACCTATGGGTGACGCGGAAATAGATGAGGAAGAAGGCGGGCTCC
CCGCCGCCGAGGGTGGTGGT

Product: flagellar motor protein MotB

Products: NA

Alternate protein names: Chemotaxis protein MotB [H]

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MAKSKCPECIQNIPEYMLTYGDMVTLLLCFFIMLYTTGKTNAIEMQIILSAFKTTTGFFDGGQTLSKGRLEEMGMNIESL
PSQTTGKALSKSKQLATELFKPEVEAGKVKITEDERGLIISLVSADYFNPGSAILTDSIKIALRKASSLIKDLNRFVRVE
GHCDANAVNPGVAPGKEERAYINNWDLAGARAINSTDYIINVEKLDPSWFQAVSFGAFRPLVVEYAGTPEAKAYNRRIDI
VIMTEKSTKRSPYETNYGLPNTKIPGSESSVPGKE

Sequences:

>Translated_275_residues
MAKSKCPECIQNIPEYMLTYGDMVTLLLCFFIMLYTTGKTNAIEMQIILSAFKTTTGFFDGGQTLSKGRLEEMGMNIESL
PSQTTGKALSKSKQLATELFKPEVEAGKVKITEDERGLIISLVSADYFNPGSAILTDSIKIALRKASSLIKDLNRFVRVE
GHCDANAVNPGVAPGKEERAYINNWDLAGARAINSTDYIINVEKLDPSWFQAVSFGAFRPLVVEYAGTPEAKAYNRRIDI
VIMTEKSTKRSPYETNYGLPNTKIPGSESSVPGKE
>Mature_274_residues
AKSKCPECIQNIPEYMLTYGDMVTLLLCFFIMLYTTGKTNAIEMQIILSAFKTTTGFFDGGQTLSKGRLEEMGMNIESLP
SQTTGKALSKSKQLATELFKPEVEAGKVKITEDERGLIISLVSADYFNPGSAILTDSIKIALRKASSLIKDLNRFVRVEG
HCDANAVNPGVAPGKEERAYINNWDLAGARAINSTDYIINVEKLDPSWFQAVSFGAFRPLVVEYAGTPEAKAYNRRIDIV
IMTEKSTKRSPYETNYGLPNTKIPGSESSVPGKE

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque- generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell inner membrane; Single- pass type II membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 30276; Mature: 30145

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSKCPECIQNIPEYMLTYGDMVTLLLCFFIMLYTTGKTNAIEMQIILSAFKTTTGFFD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCC
GGQTLSKGRLEEMGMNIESLPSQTTGKALSKSKQLATELFKPEVEAGKVKITEDERGLII
CCCCHHCCHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEE
SLVSADYFNPGSAILTDSIKIALRKASSLIKDLNRFVRVEGHCDANAVNPGVAPGKEERA
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCC
YINNWDLAGARAINSTDYIINVEKLDPSWFQAVSFGAFRPLVVEYAGTPEAKAYNRRIDI
EECCCCCCCCEEECCCCEEEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCHHHCCEEEE
VIMTEKSTKRSPYETNYGLPNTKIPGSESSVPGKE
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKSKCPECIQNIPEYMLTYGDMVTLLLCFFIMLYTTGKTNAIEMQIILSAFKTTTGFFD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCC
GGQTLSKGRLEEMGMNIESLPSQTTGKALSKSKQLATELFKPEVEAGKVKITEDERGLII
CCCCHHCCHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEE
SLVSADYFNPGSAILTDSIKIALRKASSLIKDLNRFVRVEGHCDANAVNPGVAPGKEERA
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCC
YINNWDLAGARAINSTDYIINVEKLDPSWFQAVSFGAFRPLVVEYAGTPEAKAYNRRIDI
EECCCCCCCCEEECCCCEEEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCHHHCCEEEE
VIMTEKSTKRSPYETNYGLPNTKIPGSESSVPGKE
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8755894; 9665876 [H]