| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is rsbP [H]
Identifier: 45656496
GI number: 45656496
Start: 730692
End: 732746
Strand: Direct
Name: rsbP [H]
Synonym: LIC10598
Alternate gene names: 45656496
Gene position: 730692-732746 (Clockwise)
Preceding gene: 45656493
Following gene: 45656501
Centisome position: 17.08
GC content: 34.65
Gene sequence:
>2055_bases TTGATCATACTTGTTATGATTTCTTCTCCTTGGCAAGCGGGAGATGGACTCAGAGCCTACCAAGGTAAAATCGATCTCAG AGGAATTCAAGATCCCGATTTTGGAATGACTAAACTCAACGGAGAATGGGAATTTAGCTGGCTTCAAGGACCCGAGAAAG GAATTGAAAATCATTCCGTAGAATTTATAGGAGTTCCCGGTTCTTGGACCAACGAATCCAAAAGCAATCAAACTTATCCT AAATTTGGTTATGGAATTTATAGATTAAAAGTTTTTCTTCCTGAGATATGGAAAAAGAAAATTCTATCTGTGTCTTTAGG AGCGATTGCATCTGCGTATCGAATTAAAATCAATGAACAAATCATCGGTGAATGTGGTACTCCGGGCATTGATCCAGACT CGATAGTTTCTAGAATCGAACCAAGAGATTTTTTATTTTTTGCGGACGAAGATGAAGTTCAAATCGAGATTTTTGTTTCT AATTATACTTCTACGATGCCTGGAATTTTACTTCCCATTTCTATCGGGCCTTCTGATTCCGCTGGCGTTTCAAAAGCGAT TCCATTGTTTTTTGATATATTCTCTTTTAGTAGTCTTCTGATTATGGGAATTTATCATATATTCCAATATCTTTATTTGA GAAGTAGCGTTTCTCCTCTTTATTTTGGAATGTATAGCCTAGTTATTTGTCTGAGAACTTCTTTAATAAATTCTAAAATA CTAATGTTATTTTTTCCACAAATCCCTTGGAGCTGGGTTCATAAAATCAATCACTTGACTTTGTCTGTAGGAGTTCCGTT TTTTCTTTTGTTTTTCAGTTCAATATTTGCTCCTTATGTAAGCCGAAAGTTTATCAACGTGGGAGTCGTATTTTCGATTT TGTTTTCCATCGTGACCTTGTTTGGTGATATGACGTTCAACAATCAGAGTATTTCTATTTATCATTATTTTATTATCATA ATTATATGTTATTTGTTTTATACGATTTTAAAGATCGATTTTGATAAGGAAAGAAATTACACTTATATTCTTTATGGTTC CGGAATTCTTTTTATTGCGGTGCTCGTAGATCTTTTTTACGCGAGAGTTTTAAAAACTGGAAGTATACAGACCTCACATT ACGCTCTTGTATTTTTCGTTTTTCTACAATCCCTTTTACTCGCCTCCGAAAGATCTAGGAAGTTTGCAGAAACTAGGGAA TTAGCGCTCAATCTTAGGACTTCTAACTTGGAACTTTTCGAAATGAAGGAACAATTGGTTCAAAAGATCGAAGATAGAAC CAGAGTTTTGAACGATAACATCATTCAGATCAACCGAGAACTGGAGATTGCGCAGAACGTTCAAAGGAAAATTTTGACTC CTTTGGATCGAAATATTCCAGGAATACGATTTTATTATGAATACAAACCTCTTGAAAAAGTAGGAGGAGATTTTTTGGAT ATTTCCGAAATTTCTTCCGGTAAAACAAGAGTATTGATCGCGGATGCAGTAGGTCACGGAGTACAGGCTTCTTTGATGAC CATGGCTTTAAAAACAGAATATGAAGAATTGAAAAATTTGGAGAATCCGGCTCAGGTTCTTAAGGAATTGAATTTTAGAT TTTTAAAGAAGTTCGATTCTTTGGAAAGTATATTTCCTTGTATGATTGGAGATATTGATACGGAAAAAGAAGAATTTACG TATGCGTCTGCAGGACATCCAGATCAGATTTTACAGTTACCCGGAGAATTTCCTTCCTTACTTCAAAAGACCGGACCTAT ATTAGGTTTATTTGAATCTCTTGAGATAGTTTCTAAAACGATTATATTCCCGACGGGTTCTAGGCTTTTATTGTTTTCAG ATGGTTTGATCGAAAATCGTATGAAAGATTCTTTAAATACGAAACAGCACAATATGGAACTGATTACAAAAACACTTCAT GAAGGAAGAGAAAGTGAGTTAAAGAATTTAATCCAAGAAATTATTAAAATAGAAGAGTTAACAAGAGGAGAAAATCCACG TTACGACGATATTACCGTCATAGCCGTGGAATTTTATTCTGTTAAAAGAAGTTAG
Upstream 100 bases:
>100_bases ATTGACGGCACTGAACTAAATTTCAATTTTAATTCGGAACGGATTTGATTTCGAGATGCAATTTTCAAAAATATTTTTTT TCTTAATCGGTCCGTTTGCA
Downstream 100 bases:
>100_bases GCGAAATGCTGCGTCTAAGATTGCTCGTAATAATTCAAAAATCCCATTTGAACCGCATTCCATCTTGTATCATTCCCAAA TAAAAAGCCATTTGATCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 684; Mature: 684
Protein sequence:
>684_residues MIILVMISSPWQAGDGLRAYQGKIDLRGIQDPDFGMTKLNGEWEFSWLQGPEKGIENHSVEFIGVPGSWTNESKSNQTYP KFGYGIYRLKVFLPEIWKKKILSVSLGAIASAYRIKINEQIIGECGTPGIDPDSIVSRIEPRDFLFFADEDEVQIEIFVS NYTSTMPGILLPISIGPSDSAGVSKAIPLFFDIFSFSSLLIMGIYHIFQYLYLRSSVSPLYFGMYSLVICLRTSLINSKI LMLFFPQIPWSWVHKINHLTLSVGVPFFLLFFSSIFAPYVSRKFINVGVVFSILFSIVTLFGDMTFNNQSISIYHYFIII IICYLFYTILKIDFDKERNYTYILYGSGILFIAVLVDLFYARVLKTGSIQTSHYALVFFVFLQSLLLASERSRKFAETRE LALNLRTSNLELFEMKEQLVQKIEDRTRVLNDNIIQINRELEIAQNVQRKILTPLDRNIPGIRFYYEYKPLEKVGGDFLD ISEISSGKTRVLIADAVGHGVQASLMTMALKTEYEELKNLENPAQVLKELNFRFLKKFDSLESIFPCMIGDIDTEKEEFT YASAGHPDQILQLPGEFPSLLQKTGPILGLFESLEIVSKTIIFPTGSRLLLFSDGLIENRMKDSLNTKQHNMELITKTLH EGRESELKNLIQEIIKIEELTRGENPRYDDITVIAVEFYSVKRS
Sequences:
>Translated_684_residues MIILVMISSPWQAGDGLRAYQGKIDLRGIQDPDFGMTKLNGEWEFSWLQGPEKGIENHSVEFIGVPGSWTNESKSNQTYP KFGYGIYRLKVFLPEIWKKKILSVSLGAIASAYRIKINEQIIGECGTPGIDPDSIVSRIEPRDFLFFADEDEVQIEIFVS NYTSTMPGILLPISIGPSDSAGVSKAIPLFFDIFSFSSLLIMGIYHIFQYLYLRSSVSPLYFGMYSLVICLRTSLINSKI LMLFFPQIPWSWVHKINHLTLSVGVPFFLLFFSSIFAPYVSRKFINVGVVFSILFSIVTLFGDMTFNNQSISIYHYFIII IICYLFYTILKIDFDKERNYTYILYGSGILFIAVLVDLFYARVLKTGSIQTSHYALVFFVFLQSLLLASERSRKFAETRE LALNLRTSNLELFEMKEQLVQKIEDRTRVLNDNIIQINRELEIAQNVQRKILTPLDRNIPGIRFYYEYKPLEKVGGDFLD ISEISSGKTRVLIADAVGHGVQASLMTMALKTEYEELKNLENPAQVLKELNFRFLKKFDSLESIFPCMIGDIDTEKEEFT YASAGHPDQILQLPGEFPSLLQKTGPILGLFESLEIVSKTIIFPTGSRLLLFSDGLIENRMKDSLNTKQHNMELITKTLH EGRESELKNLIQEIIKIEELTRGENPRYDDITVIAVEFYSVKRS >Mature_684_residues MIILVMISSPWQAGDGLRAYQGKIDLRGIQDPDFGMTKLNGEWEFSWLQGPEKGIENHSVEFIGVPGSWTNESKSNQTYP KFGYGIYRLKVFLPEIWKKKILSVSLGAIASAYRIKINEQIIGECGTPGIDPDSIVSRIEPRDFLFFADEDEVQIEIFVS NYTSTMPGILLPISIGPSDSAGVSKAIPLFFDIFSFSSLLIMGIYHIFQYLYLRSSVSPLYFGMYSLVICLRTSLINSKI LMLFFPQIPWSWVHKINHLTLSVGVPFFLLFFSSIFAPYVSRKFINVGVVFSILFSIVTLFGDMTFNNQSISIYHYFIII IICYLFYTILKIDFDKERNYTYILYGSGILFIAVLVDLFYARVLKTGSIQTSHYALVFFVFLQSLLLASERSRKFAETRE LALNLRTSNLELFEMKEQLVQKIEDRTRVLNDNIIQINRELEIAQNVQRKILTPLDRNIPGIRFYYEYKPLEKVGGDFLD ISEISSGKTRVLIADAVGHGVQASLMTMALKTEYEELKNLENPAQVLKELNFRFLKKFDSLESIFPCMIGDIDTEKEEFT YASAGHPDQILQLPGEFPSLLQKTGPILGLFESLEIVSKTIIFPTGSRLLLFSDGLIENRMKDSLNTKQHNMELITKTLH EGRESELKNLIQEIIKIEELTRGENPRYDDITVIAVEFYSVKRS
Specific function: Positive regulator of sigma-B activity. Dephosphorylates rsbV in response to energy stress [H]
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR001932 - InterPro: IPR010822 [H]
Pfam domain/function: PF00989 PAS; PF07228 SpoIIE [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 78227; Mature: 78227
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIILVMISSPWQAGDGLRAYQGKIDLRGIQDPDFGMTKLNGEWEFSWLQGPEKGIENHSV CEEEEEECCCCCCCCCCEEECCCEEECCCCCCCCCCEEECCCEEEEECCCCHHCCCCCCE EFIGVPGSWTNESKSNQTYPKFGYGIYRLKVFLPEIWKKKILSVSLGAIASAYRIKINEQ EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHH IIGECGTPGIDPDSIVSRIEPRDFLFFADEDEVQIEIFVSNYTSTMPGILLPISIGPSDS HHCCCCCCCCCHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCCCCEEEEEEECCCCC AGVSKAIPLFFDIFSFSSLLIMGIYHIFQYLYLRSSVSPLYFGMYSLVICLRTSLINSKI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCE LMLFFPQIPWSWVHKINHLTLSVGVPFFLLFFSSIFAPYVSRKFINVGVVFSILFSIVTL EEEEECCCCHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGDMTFNNQSISIYHYFIIIIICYLFYTILKIDFDKERNYTYILYGSGILFIAVLVDLFY HCCCEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCHHHHHHHHHHHH ARVLKTGSIQTSHYALVFFVFLQSLLLASERSRKFAETRELALNLRTSNLELFEMKEQLV HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHH QKIEDRTRVLNDNIIQINRELEIAQNVQRKILTPLDRNIPGIRFYYEYKPLEKVGGDFLD HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCHHCCCCCCEEEEEECCCHHHHCCCEEE ISEISSGKTRVLIADAVGHGVQASLMTMALKTEYEELKNLENPAQVLKELNFRFLKKFDS HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LESIFPCMIGDIDTEKEEFTYASAGHPDQILQLPGEFPSLLQKTGPILGLFESLEIVSKT HHHHHHHHHCCCCCCHHHEEEECCCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHE IIFPTGSRLLLFSDGLIENRMKDSLNTKQHNMELITKTLHEGRESELKNLIQEIIKIEEL EEECCCCEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH TRGENPRYDDITVIAVEFYSVKRS HCCCCCCCCCEEEEEEEEEECCCC >Mature Secondary Structure MIILVMISSPWQAGDGLRAYQGKIDLRGIQDPDFGMTKLNGEWEFSWLQGPEKGIENHSV CEEEEEECCCCCCCCCCEEECCCEEECCCCCCCCCCEEECCCEEEEECCCCHHCCCCCCE EFIGVPGSWTNESKSNQTYPKFGYGIYRLKVFLPEIWKKKILSVSLGAIASAYRIKINEQ EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHH IIGECGTPGIDPDSIVSRIEPRDFLFFADEDEVQIEIFVSNYTSTMPGILLPISIGPSDS HHCCCCCCCCCHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCCCCEEEEEEECCCCC AGVSKAIPLFFDIFSFSSLLIMGIYHIFQYLYLRSSVSPLYFGMYSLVICLRTSLINSKI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCE LMLFFPQIPWSWVHKINHLTLSVGVPFFLLFFSSIFAPYVSRKFINVGVVFSILFSIVTL EEEEECCCCHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGDMTFNNQSISIYHYFIIIIICYLFYTILKIDFDKERNYTYILYGSGILFIAVLVDLFY HCCCEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCHHHHHHHHHHHH ARVLKTGSIQTSHYALVFFVFLQSLLLASERSRKFAETRELALNLRTSNLELFEMKEQLV HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHH QKIEDRTRVLNDNIIQINRELEIAQNVQRKILTPLDRNIPGIRFYYEYKPLEKVGGDFLD HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCHHCCCCCCEEEEEECCCHHHHCCCEEE ISEISSGKTRVLIADAVGHGVQASLMTMALKTEYEELKNLENPAQVLKELNFRFLKKFDS HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LESIFPCMIGDIDTEKEEFTYASAGHPDQILQLPGEFPSLLQKTGPILGLFESLEIVSKT HHHHHHHHHCCCCCCHHHEEEECCCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHE IIFPTGSRLLLFSDGLIENRMKDSLNTKQHNMELITKTLHEGRESELKNLIQEIIKIEEL EEECCCCEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH TRGENPRYDDITVIAVEFYSVKRS HCCCCCCCCCEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 10632888 [H]