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The map label for this gene is 45656397

Identifier: 45656397

GI number: 45656397

Start: 586849

End: 587388

Strand: Direct

Name: 45656397

Synonym: LIC10499

Alternate gene names: NA

Gene position: 586849-587388 (Clockwise)

Preceding gene: 45656396

Following gene: 45656398

Centisome position: 13.72

GC content: 43.52

Gene sequence:

>540_bases
ATGAAAATTAGAAAGTTATATGTTTGCCTGTTTTGTTTTATATGGATGTTGACCGTGCAAATCCAAGCGGATGCTCCTCC
GACACGCTTTGAAGATAAATTGGACGGAACCGTTTTAGATAAAAGAACGGGGCTGATTTGGCAGATTTGCGCTGCGGGAT
TAGGTTCGCATAATGGTTCGGGTAGATCAACTTGCGGGATGTCGAGTGGAAATTTGTCTGGTAATGCGGATCAATACCAT
TGGGGAGATGCATTGAGATACTGTAATGGATCTTTGGCGAAAAAGCCACCGGTTTTGCCAGCAGGTAAAACATGGAGACT
ACCGAATATCAACGAGTTAAAAAGTATCGTGGATCGGTCACAGCTAAATCCTGCAATGGACACGAGTGTATTGATTGCAG
GAGGGGATTATTATTGGACTTCCACTACAACTAACACGAATTTTGCGAACGCTTGGACTGTAAATTTTTTGTACGGCAGT
GCATACGTGACCTCTACCAAGGACTGGGGTTATTATGTAAGATGTGTTGCGGGACCGTAA

Upstream 100 bases:

>100_bases
AATATATTATAATGAATTTCTTGTCTTTTTTACGGGGCTAACACTCTCCGTATGTGTCCTTTATCGTCTATTTTTTGTCC
TCTGAATAGGAGAAATAAAA

Downstream 100 bases:

>100_bases
TTTAACGTATAGAAAAAAAGCAGCATAACAACTTATGTTTTTTTTCGACAGAAAGCGAGCTAGGCGTATTACGAATTTAT
ATTATATTTTTTGAGGATAA

Product: outer membrane protein

Products: NA

Alternate protein names: Fimh-Like Protein

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKIRKLYVCLFCFIWMLTVQIQADAPPTRFEDKLDGTVLDKRTGLIWQICAAGLGSHNGSGRSTCGMSSGNLSGNADQYH
WGDALRYCNGSLAKKPPVLPAGKTWRLPNINELKSIVDRSQLNPAMDTSVLIAGGDYYWTSTTTNTNFANAWTVNFLYGS
AYVTSTKDWGYYVRCVAGP

Sequences:

>Translated_179_residues
MKIRKLYVCLFCFIWMLTVQIQADAPPTRFEDKLDGTVLDKRTGLIWQICAAGLGSHNGSGRSTCGMSSGNLSGNADQYH
WGDALRYCNGSLAKKPPVLPAGKTWRLPNINELKSIVDRSQLNPAMDTSVLIAGGDYYWTSTTTNTNFANAWTVNFLYGS
AYVTSTKDWGYYVRCVAGP
>Mature_179_residues
MKIRKLYVCLFCFIWMLTVQIQADAPPTRFEDKLDGTVLDKRTGLIWQICAAGLGSHNGSGRSTCGMSSGNLSGNADQYH
WGDALRYCNGSLAKKPPVLPAGKTWRLPNINELKSIVDRSQLNPAMDTSVLIAGGDYYWTSTTTNTNFANAWTVNFLYGS
AYVTSTKDWGYYVRCVAGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19750; Mature: 19750

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRKLYVCLFCFIWMLTVQIQADAPPTRFEDKLDGTVLDKRTGLIWQICAAGLGSHNGS
CCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCC
GRSTCGMSSGNLSGNADQYHWGDALRYCNGSLAKKPPVLPAGKTWRLPNINELKSIVDRS
CCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHH
QLNPAMDTSVLIAGGDYYWTSTTTNTNFANAWTVNFLYGSAYVTSTKDWGYYVRCVAGP
HCCCCCCCEEEEECCCEEEEECCCCCCCCCEEEEEEEECCEEEECCCCCCEEEEEEECC
>Mature Secondary Structure
MKIRKLYVCLFCFIWMLTVQIQADAPPTRFEDKLDGTVLDKRTGLIWQICAAGLGSHNGS
CCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCC
GRSTCGMSSGNLSGNADQYHWGDALRYCNGSLAKKPPVLPAGKTWRLPNINELKSIVDRS
CCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHH
QLNPAMDTSVLIAGGDYYWTSTTTNTNFANAWTVNFLYGSAYVTSTKDWGYYVRCVAGP
HCCCCCCCEEEEECCCEEEEECCCCCCCCCEEEEEEEECCEEEECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA