Click here to switch to the map view.

The map label for this gene is 45656348

Identifier: 45656348

GI number: 45656348

Start: 512791

End: 513861

Strand: Direct

Name: 45656348

Synonym: LIC10450

Alternate gene names: NA

Gene position: 512791-513861 (Clockwise)

Preceding gene: 45656347

Following gene: 45656349

Centisome position: 11.99

GC content: 36.23

Gene sequence:

>1071_bases
ATGTTAAACAAATTTGAATATATCGTCGTAGATTCTATCTCTTCTGTAGATCCTAACACACTTTCTTTGGGTCAACTCAA
TCAGAAATTTATAGACAAACAAGGAAATCGTTTTGCCCTTCGTTTCAATCGAGACACTAGAAGATTGGAATTCGTGAGGA
TTGCTTTAGAATCTCCTAATGAAGCACAAAAACACAAACAAGTTTCGCGTGCTCCCGTTAGACAAGTTTTACCTTCACTG
GATCCTTCTACGGCGAAAAAAATTTCTTCTCTGCAAGAAATCATGTCTAAAACCCAAGAGCAGTCTTCTGCAAAAATTCC
AAAACCGAGTTCTTTTCAAACTACTAACGAAGGAGCGATTCCAAAACCGATTTTTCAAAGGGATCATCGTAAAGCCAGAG
ACGTTTCTAATGCTGATTTGGATTTGAGTCAAATGGATCTCAATATTATGGATGGCCCCGCTCTTTCCACCAAACACGAC
TCAGGTGATTCTTTGTTAAAAATGGAATACGGTTCTTCTACTTCTCTAGGAGACGGAAACGTTATCGAGAAAAAAATCTC
TGAACTTACTAAACTTAAAGAAAGAATTCATTCTGTTTTGAATAATCTTCAAAATTCAAAAATTTTCGAAATCACTGGCG
ATCCTTCCGAAAATAAAAACATCATAGGAAACTTAAATCGGGAGTTTGACATCGAATTTTTTCAAAAGCTGGATCGGTTA
GTAAATTACCATAAAGAACTGACCACTTATCCTAGATCAGTCAACTACTACACGGCTAAATTTGAGTCTTCCAAAAAGCA
GATTCTTCAATCTAAAAATACGGATGCTGAAAAACTCAAACTAGTGACTCTTTGGGAGATGCAGGAGCTGATGCTCGGGT
TGGTTCAAAAACTTAAAAAGATGGTTTTAAGCGCTTTGAACGTTTTAAACACCAAAAATGATAATCACATCAAACAACTT
CCATACAATCAGCAACAAATGTTTCGAGATTCTAGAACAGCGCTTCTTTATTGTTCGGAAGATATTTCTTCTTTACTTAT
CTCTTTGGAAAGTTGGGTCGATACTGAATAG

Upstream 100 bases:

>100_bases
GATTAAAGTCATTTCCCATTTTGTTCGACAAACACGACGTATTCGGTTCTGAAAATTTTTTTCAACTTAATAATGGAACC
GTCTTTGAGGAAGATTGTTA

Downstream 100 bases:

>100_bases
GAGATAACTCCTATGGAACCCTTACAAAGCTCCGAAATTAAAGCCGTTCTTGATAAACTGAGGACGGAATATTCTGAAAA
TTCAAAAAAGAATCCAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MLNKFEYIVVDSISSVDPNTLSLGQLNQKFIDKQGNRFALRFNRDTRRLEFVRIALESPNEAQKHKQVSRAPVRQVLPSL
DPSTAKKISSLQEIMSKTQEQSSAKIPKPSSFQTTNEGAIPKPIFQRDHRKARDVSNADLDLSQMDLNIMDGPALSTKHD
SGDSLLKMEYGSSTSLGDGNVIEKKISELTKLKERIHSVLNNLQNSKIFEITGDPSENKNIIGNLNREFDIEFFQKLDRL
VNYHKELTTYPRSVNYYTAKFESSKKQILQSKNTDAEKLKLVTLWEMQELMLGLVQKLKKMVLSALNVLNTKNDNHIKQL
PYNQQQMFRDSRTALLYCSEDISSLLISLESWVDTE

Sequences:

>Translated_356_residues
MLNKFEYIVVDSISSVDPNTLSLGQLNQKFIDKQGNRFALRFNRDTRRLEFVRIALESPNEAQKHKQVSRAPVRQVLPSL
DPSTAKKISSLQEIMSKTQEQSSAKIPKPSSFQTTNEGAIPKPIFQRDHRKARDVSNADLDLSQMDLNIMDGPALSTKHD
SGDSLLKMEYGSSTSLGDGNVIEKKISELTKLKERIHSVLNNLQNSKIFEITGDPSENKNIIGNLNREFDIEFFQKLDRL
VNYHKELTTYPRSVNYYTAKFESSKKQILQSKNTDAEKLKLVTLWEMQELMLGLVQKLKKMVLSALNVLNTKNDNHIKQL
PYNQQQMFRDSRTALLYCSEDISSLLISLESWVDTE
>Mature_356_residues
MLNKFEYIVVDSISSVDPNTLSLGQLNQKFIDKQGNRFALRFNRDTRRLEFVRIALESPNEAQKHKQVSRAPVRQVLPSL
DPSTAKKISSLQEIMSKTQEQSSAKIPKPSSFQTTNEGAIPKPIFQRDHRKARDVSNADLDLSQMDLNIMDGPALSTKHD
SGDSLLKMEYGSSTSLGDGNVIEKKISELTKLKERIHSVLNNLQNSKIFEITGDPSENKNIIGNLNREFDIEFFQKLDRL
VNYHKELTTYPRSVNYYTAKFESSKKQILQSKNTDAEKLKLVTLWEMQELMLGLVQKLKKMVLSALNVLNTKNDNHIKQL
PYNQQQMFRDSRTALLYCSEDISSLLISLESWVDTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40716; Mature: 40716

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKFEYIVVDSISSVDPNTLSLGQLNQKFIDKQGNRFALRFNRDTRRLEFVRIALESPN
CCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHCCCCEEEEEECCCCHHEEEEEEEECCCC
EAQKHKQVSRAPVRQVLPSLDPSTAKKISSLQEIMSKTQEQSSAKIPKPSSFQTTNEGAI
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PKPIFQRDHRKARDVSNADLDLSQMDLNIMDGPALSTKHDSGDSLLKMEYGSSTSLGDGN
CCHHHHHHHHHHHCCCCCCCCHHHCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCH
VIEKKISELTKLKERIHSVLNNLQNSKIFEITGDPSENKNIIGNLNREFDIEFFQKLDRL
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEECCCCCCCHHHHHHHHHH
VNYHKELTTYPRSVNYYTAKFESSKKQILQSKNTDAEKLKLVTLWEMQELMLGLVQKLKK
HHHHHHHHCCCCCCCEEEEEHHHHHHHHHHCCCCCHHHEEEHHHHHHHHHHHHHHHHHHH
MVLSALNVLNTKNDNHIKQLPYNQQQMFRDSRTALLYCSEDISSLLISLESWVDTE
HHHHHHHHHCCCCCCCHHCCCCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLNKFEYIVVDSISSVDPNTLSLGQLNQKFIDKQGNRFALRFNRDTRRLEFVRIALESPN
CCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHCCCCEEEEEECCCCHHEEEEEEEECCCC
EAQKHKQVSRAPVRQVLPSLDPSTAKKISSLQEIMSKTQEQSSAKIPKPSSFQTTNEGAI
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PKPIFQRDHRKARDVSNADLDLSQMDLNIMDGPALSTKHDSGDSLLKMEYGSSTSLGDGN
CCHHHHHHHHHHHCCCCCCCCHHHCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCH
VIEKKISELTKLKERIHSVLNNLQNSKIFEITGDPSENKNIIGNLNREFDIEFFQKLDRL
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEECCCCCCCHHHHHHHHHH
VNYHKELTTYPRSVNYYTAKFESSKKQILQSKNTDAEKLKLVTLWEMQELMLGLVQKLKK
HHHHHHHHCCCCCCCEEEEEHHHHHHHHHHCCCCCHHHEEEHHHHHHHHHHHHHHHHHHH
MVLSALNVLNTKNDNHIKQLPYNQQQMFRDSRTALLYCSEDISSLLISLESWVDTE
HHHHHHHHHCCCCCCCHHCCCCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA