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The map label for this gene is 45656280

Identifier: 45656280

GI number: 45656280

Start: 429918

End: 430463

Strand: Direct

Name: 45656280

Synonym: LIC10380

Alternate gene names: NA

Gene position: 429918-430463 (Clockwise)

Preceding gene: 45656279

Following gene: 45656284

Centisome position: 10.05

GC content: 33.33

Gene sequence:

>546_bases
ATGAAAATTTTTGCACTGAGTATTTTAGTTTTAGTAGTTTTACTTGTAGCGTTCTTGTTTTATATGGGCGCTTTTAATCG
GGTTTTGGTTCAAGAGGAAATGAAAGGACCGTTTTACGTTCTTTCGCATGAAAGGATTGGAGATTATAGAAACGTTGGGC
TTACGTTTGAAGCCCTTCAAAAAGAACTGCCTGAAAAAGGAATTCGAAATTTTAAATTGTTCTCAATATATTTGGATAAT
CCAAATGAGGTTCCTAAAGAAAAACTACGATGTGAAGTAGGAGCTCTTTTTTCGGAACCATTAGAAAAAATTCCAAATGG
ACTTTCTTTAGAGTTAAAAATAAGAACCATTCCTTCTAAAAAATATCTTACCGCGGAATTTCCATTGAGAAATTTTCTTT
CTATTTTTCTTGGAATTTATAAGGTTTATCCGAAACTTTTCAGAGCCTGTGAAGAAAGAGGTTGTGATCTTAAAGGAAGG
GCATCCATTGAAATTTATGAACCTCTTACGGAACATAAGACTACATATCTTCTGCCTTTAGATTAG

Upstream 100 bases:

>100_bases
AAAAAGAAAAGATCTGTTTTCAAAAGATATTCTTATCTATTTTATATAAATATGAGTTTAGTAGTTCCTTTTTTTCTAAT
TTTAGTTCTTTGAGGAGTTT

Downstream 100 bases:

>100_bases
AAAAGTTATTAAAATCTATCTTAAAAATAAATTAAAATATTTTGAAATTATATTCAAAAGTAAGAATATAAGGTTTTTGA
GATAGATAGTACGTACTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKIFALSILVLVVLLVAFLFYMGAFNRVLVQEEMKGPFYVLSHERIGDYRNVGLTFEALQKELPEKGIRNFKLFSIYLDN
PNEVPKEKLRCEVGALFSEPLEKIPNGLSLELKIRTIPSKKYLTAEFPLRNFLSIFLGIYKVYPKLFRACEERGCDLKGR
ASIEIYEPLTEHKTTYLLPLD

Sequences:

>Translated_181_residues
MKIFALSILVLVVLLVAFLFYMGAFNRVLVQEEMKGPFYVLSHERIGDYRNVGLTFEALQKELPEKGIRNFKLFSIYLDN
PNEVPKEKLRCEVGALFSEPLEKIPNGLSLELKIRTIPSKKYLTAEFPLRNFLSIFLGIYKVYPKLFRACEERGCDLKGR
ASIEIYEPLTEHKTTYLLPLD
>Mature_181_residues
MKIFALSILVLVVLLVAFLFYMGAFNRVLVQEEMKGPFYVLSHERIGDYRNVGLTFEALQKELPEKGIRNFKLFSIYLDN
PNEVPKEKLRCEVGALFSEPLEKIPNGLSLELKIRTIPSKKYLTAEFPLRNFLSIFLGIYKVYPKLFRACEERGCDLKGR
ASIEIYEPLTEHKTTYLLPLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20942; Mature: 20942

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFALSILVLVVLLVAFLFYMGAFNRVLVQEEMKGPFYVLSHERIGDYRNVGLTFEALQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCHHCCCCCHHHHH
KELPEKGIRNFKLFSIYLDNPNEVPKEKLRCEVGALFSEPLEKIPNGLSLELKIRTIPSK
HHCCHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCC
KYLTAEFPLRNFLSIFLGIYKVYPKLFRACEERGCDLKGRASIEIYEPLTEHKTTYLLPL
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHCCEEEEEEC
D
C
>Mature Secondary Structure
MKIFALSILVLVVLLVAFLFYMGAFNRVLVQEEMKGPFYVLSHERIGDYRNVGLTFEALQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCHHCCCCCHHHHH
KELPEKGIRNFKLFSIYLDNPNEVPKEKLRCEVGALFSEPLEKIPNGLSLELKIRTIPSK
HHCCHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCC
KYLTAEFPLRNFLSIFLGIYKVYPKLFRACEERGCDLKGRASIEIYEPLTEHKTTYLLPL
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHCCEEEEEEC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA