Click here to switch to the map view.

The map label for this gene is 45656268

Identifier: 45656268

GI number: 45656268

Start: 412116

End: 413195

Strand: Reverse

Name: 45656268

Synonym: LIC10365

Alternate gene names: NA

Gene position: 413195-412116 (Counterclockwise)

Preceding gene: 45656269

Following gene: 45656265

Centisome position: 9.66

GC content: 42.59

Gene sequence:

>1080_bases
ATGAAACATTTTTTAAATATTTTTTTCGTAGGATTGTTATTAGTCGGCTGTGCTTCGGAAAGCGGCGAAAACAGTAACGC
TTCCCAATTGCTTTTAGGAATTGTAAATCACAAACAGCTTAACCTTGCCCATCCCGAACGGAATTCGGAACTGAGGATTT
TAGATATACCGACGCATTACGTGGATTCCATCTCCGGAAACAACTCCAATGCAGGTACTAAGTCCGCCCCCTACCGTACA
ATCACAAAGGCGATTATAGCATCCAAGGCCGACGGTACAAAAGTGATTCTAGTTGCGCCCGGAACCTACGACAAGTCCCT
AGGAGAGACATTTCCTATTTATATTCCGGATGGAGTTAACTTATACGGAGACTATGATGGAAAGGGTTTGGTCGGCGGTT
CTTCCTCCCTTTACGCGGGACCACCGGGAACCACACCTAAAACAGGACCCACTTGGATCAACGGGGGAGGAGACGACATT
CCCCACGTGAATGCCACCATCATCCCGAACAATAACTCTCAAATTGCCGGATTTAAAATCACCAACCCGAACCCGGATAT
TCCAGATGATTATTCAGTTAGAGGGATTTCTATACAGAATTTCGTATCCATAAAGATTAAAAATAATACGATCACTGGAA
TGCCCTTGGGAATCGGTATCCAGTACGAATATTATCACGTAACGGCTGTCGGTCATAATATAATCTCTGGAAATCAACTC
ACTTTTAATTATCATGGGATCATCAATAATGGAATTCGAGCTTCCTATGACAAAGTGGAGAACAATGTAATTTCTAAAAA
TTACATAGGTATCGGCAGTCCAATTGGACTTGATTTAGGACAGGGGCCGACCGGAAGCGCGGGAAATAATACTATATCCT
GCAATTCATACAATGATATATGGATTCCAGGAAATGGTAACGAAACACAAATTATATACGCAATGAATAACAATTGGGAT
CACTTTCCGCCTCAGATTTCTTTCGACCACAGCAAGGCTGGCTTAGACATAGGACACGTTAGTAATGCAACTCTTGTTTA
CTACGAGGATGGGGGATTGGCTCCAAACGCTTGTAAATAA

Upstream 100 bases:

>100_bases
CTATCTATGCCAAATTATTGAATAAAAATGACTTCATTAATATTGACAAAATTTAAACTTAATTCAATGTTTCAAAACTT
TTAAAACAAGGATACCGAAA

Downstream 100 bases:

>100_bases
AAAACGATCCTTCCTTCTTTTCGATATCAAACGAGGGAAGGATCTTCGAAATCAATTACGGTTATCTCTTCCTCACCAAC
GAAACCCCGTCTGCAATCGG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKHFLNIFFVGLLLVGCASESGENSNASQLLLGIVNHKQLNLAHPERNSELRILDIPTHYVDSISGNNSNAGTKSAPYRT
ITKAIIASKADGTKVILVAPGTYDKSLGETFPIYIPDGVNLYGDYDGKGLVGGSSSLYAGPPGTTPKTGPTWINGGGDDI
PHVNATIIPNNNSQIAGFKITNPNPDIPDDYSVRGISIQNFVSIKIKNNTITGMPLGIGIQYEYYHVTAVGHNIISGNQL
TFNYHGIINNGIRASYDKVENNVISKNYIGIGSPIGLDLGQGPTGSAGNNTISCNSYNDIWIPGNGNETQIIYAMNNNWD
HFPPQISFDHSKAGLDIGHVSNATLVYYEDGGLAPNACK

Sequences:

>Translated_359_residues
MKHFLNIFFVGLLLVGCASESGENSNASQLLLGIVNHKQLNLAHPERNSELRILDIPTHYVDSISGNNSNAGTKSAPYRT
ITKAIIASKADGTKVILVAPGTYDKSLGETFPIYIPDGVNLYGDYDGKGLVGGSSSLYAGPPGTTPKTGPTWINGGGDDI
PHVNATIIPNNNSQIAGFKITNPNPDIPDDYSVRGISIQNFVSIKIKNNTITGMPLGIGIQYEYYHVTAVGHNIISGNQL
TFNYHGIINNGIRASYDKVENNVISKNYIGIGSPIGLDLGQGPTGSAGNNTISCNSYNDIWIPGNGNETQIIYAMNNNWD
HFPPQISFDHSKAGLDIGHVSNATLVYYEDGGLAPNACK
>Mature_359_residues
MKHFLNIFFVGLLLVGCASESGENSNASQLLLGIVNHKQLNLAHPERNSELRILDIPTHYVDSISGNNSNAGTKSAPYRT
ITKAIIASKADGTKVILVAPGTYDKSLGETFPIYIPDGVNLYGDYDGKGLVGGSSSLYAGPPGTTPKTGPTWINGGGDDI
PHVNATIIPNNNSQIAGFKITNPNPDIPDDYSVRGISIQNFVSIKIKNNTITGMPLGIGIQYEYYHVTAVGHNIISGNQL
TFNYHGIINNGIRASYDKVENNVISKNYIGIGSPIGLDLGQGPTGSAGNNTISCNSYNDIWIPGNGNETQIIYAMNNNWD
HFPPQISFDHSKAGLDIGHVSNATLVYYEDGGLAPNACK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38334; Mature: 38334

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHFLNIFFVGLLLVGCASESGENSNASQLLLGIVNHKQLNLAHPERNSELRILDIPTHY
CCHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEEECCCEEEEECCCCCCCEEEEECCHHH
VDSISGNNSNAGTKSAPYRTITKAIIASKADGTKVILVAPGTYDKSLGETFPIYIPDGVN
HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCEEEEEECCCCE
LYGDYDGKGLVGGSSSLYAGPPGTTPKTGPTWINGGGDDIPHVNATIIPNNNSQIAGFKI
EEECCCCCEEECCCCCEECCCCCCCCCCCCCEECCCCCCCCCEEEEEEECCCCEEEEEEE
TNPNPDIPDDYSVRGISIQNFVSIKIKNNTITGMPLGIGIQYEYYHVTAVGHNIISGNQL
CCCCCCCCCCCCEEEEEEEEEEEEEEECCEEECCEEEEEEEEEEEEEEEECCEEECCCEE
TFNYHGIINNGIRASYDKVENNVISKNYIGIGSPIGLDLGQGPTGSAGNNTISCNSYNDI
EEEECCEECCCCCCCHHHHHCCEECCCEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCE
WIPGNGNETQIIYAMNNNWDHFPPQISFDHSKAGLDIGHVSNATLVYYEDGGLAPNACK
EECCCCCCEEEEEEECCCCCCCCCEEEECCCCCCEEEEECCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKHFLNIFFVGLLLVGCASESGENSNASQLLLGIVNHKQLNLAHPERNSELRILDIPTHY
CCHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEEECCCEEEEECCCCCCCEEEEECCHHH
VDSISGNNSNAGTKSAPYRTITKAIIASKADGTKVILVAPGTYDKSLGETFPIYIPDGVN
HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCEEEEEECCCCE
LYGDYDGKGLVGGSSSLYAGPPGTTPKTGPTWINGGGDDIPHVNATIIPNNNSQIAGFKI
EEECCCCCEEECCCCCEECCCCCCCCCCCCCEECCCCCCCCCEEEEEEECCCCEEEEEEE
TNPNPDIPDDYSVRGISIQNFVSIKIKNNTITGMPLGIGIQYEYYHVTAVGHNIISGNQL
CCCCCCCCCCCCEEEEEEEEEEEEEEECCEEECCEEEEEEEEEEEEEEEECCEEECCCEE
TFNYHGIINNGIRASYDKVENNVISKNYIGIGSPIGLDLGQGPTGSAGNNTISCNSYNDI
EEEECCEECCCCCCCHHHHHCCEECCCEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCE
WIPGNGNETQIIYAMNNNWDHFPPQISFDHSKAGLDIGHVSNATLVYYEDGGLAPNACK
EECCCCCCEEEEEEECCCCCCCCCEEEECCCCCCEEEEECCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA