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The map label for this gene is 45656248

Identifier: 45656248

GI number: 45656248

Start: 389836

End: 390102

Strand: Direct

Name: 45656248

Synonym: LIC10344

Alternate gene names: NA

Gene position: 389836-390102 (Clockwise)

Preceding gene: 45656247

Following gene: 45656249

Centisome position: 9.11

GC content: 39.33

Gene sequence:

>267_bases
TTGGAAATCAAAACGAAAAAGATCGGTAAACATACTCTGGTAGCACTCAACGGCAGGCTGGATATTGGACATTCAGACGA
AGTAGAAGCGAAGTTACTAGATGACGTTCAATCCGGGCAGGGTGATATTTTAATCAACCTGGAAAATATTTCTTACATTT
CATCTTCGGGGGATTCGTATCTTTGTAGGTATGGTAAGAGAATTGGAAAAGCAGGGAAGGAAATTGAAGCTTTGTTGTAT
CACTCCGCCTGTAAAAAAAGTATTTGA

Upstream 100 bases:

>100_bases
TTTTCTTTAGATGAAATTCTGGATATTGAAACTTAAAAATGAGTTGTAAACGCGTTTCGAAAACTTAAGTTAGTCCTAAT
ACTCCAAAAGGAAGCCATCT

Downstream 100 bases:

>100_bases
TGTAGTCGAATTGCTGGATCTGTTTGAAGTTTACGAAACAGAAAGTTCCGCTCTCGATTCACTTGCCTAAAGTCCGGGTT
TGCCCCGGATTATCTCCTTG

Product: anti-sigma factor antagonist

Products: NA

Alternate protein names: AntiSigma Factor Antagonist

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MEIKTKKIGKHTLVALNGRLDIGHSDEVEAKLLDDVQSGQGDILINLENISYISSSGDSYLCRYGKRIGKAGKEIEALLY
HSACKKSI

Sequences:

>Translated_88_residues
MEIKTKKIGKHTLVALNGRLDIGHSDEVEAKLLDDVQSGQGDILINLENISYISSSGDSYLCRYGKRIGKAGKEIEALLY
HSACKKSI
>Mature_88_residues
MEIKTKKIGKHTLVALNGRLDIGHSDEVEAKLLDDVQSGQGDILINLENISYISSSGDSYLCRYGKRIGKAGKEIEALLY
HSACKKSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9649; Mature: 9649

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKTKKIGKHTLVALNGRLDIGHSDEVEAKLLDDVQSGQGDILINLENISYISSSGDSY
CCCCCCCCCCEEEEEECCEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCEEECCCCCHH
LCRYGKRIGKAGKEIEALLYHSACKKSI
HHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEIKTKKIGKHTLVALNGRLDIGHSDEVEAKLLDDVQSGQGDILINLENISYISSSGDSY
CCCCCCCCCCEEEEEECCEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCEEECCCCCHH
LCRYGKRIGKAGKEIEALLYHSACKKSI
HHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA