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The map label for this gene is 45656206

Identifier: 45656206

GI number: 45656206

Start: 343096

End: 344145

Strand: Direct

Name: 45656206

Synonym: LIC10302

Alternate gene names: NA

Gene position: 343096-344145 (Clockwise)

Preceding gene: 45656205

Following gene: 45656207

Centisome position: 8.02

GC content: 33.33

Gene sequence:

>1050_bases
ATGAAACGTATCTTTTACTTGTTTTTATTTTTGTTTTTTCTTTCGGGAATTCTTTTTGCAAACGAGGAAGACGAAAGTTT
TCCGGAATCTAATCAAGATCAGGTTCCTTTAAGTCCGACTGATGCAGCCAGACGTAAAATTCAAATTACTGCTTTAAATA
CGGAAACTGTTAATCTTATTCGAGCAAACAATCTTTCTAAAGCTTCTATCAATATTGATAAGATTAAAAAATTGGATGAA
AACTCGGTTGAATATCATTATTTGAAAGGTTCTTATCTTTACGCTCAGGGAAGGTATCCTCAATCGAAAAATTCTCTTTT
AAAAGCGATTCAGATTCATTCCAGTCACGACCCTTCTTACTATTTATTGGGAATGATTTTTGTTCAAAGAAATAAATGGG
CAAAGTCTTTGGAATACTTTCAAAAGGCGGTGGAACTTTCTAATTACAATCCGTTTTATAGAATCAACTTGGCATTGGCT
TATTTTGAGACTGGAAATTTTTTAAGAGCAAAGGCGGAAGCAGAAAGGGCTATAGAACTGAAGCCAAATTTTAGAGCCGC
GAAACTTCTTCTTTTAAAATCCAATTTTCTTTTAGGAAACAAAGCGGATGCTTATTCCCAGTGTGTCGATTTTGTTAAAG
AAGGATTTATTTCTAAAGAATACATGTTGATTCATGCAAGACTTGTAATAGAGATTCATCAAAATTACAGAAAGGCAATT
AAAATTTATTCTCAGTATGGTGAACTTCCTCTTCACGAAAAAAGATTCTTAGCTCAAGCTTATTATAATACTGGAAATTA
TCGTGCCGCCGCCGCTGCTTATCAATCTGTAATACAATTAAAAATAGTTGAAGAAGAAGACAAAATTCAATACATCCGCT
CTCTTTCGTTTATCAAAGATTATAAAAGATTAGAATCTTTTGTGGCTTTCTGGCTTCAAGAAGAACCAGACAAGCGTAAA
AAAATTCAAGAAGCTTTGGATATTGCGGAACTCCTCAAAGAGAACGATTCTAAAGTTTTTCATATGTTTCCTTCTAGATC
TCCATACTGA

Upstream 100 bases:

>100_bases
TGAACGAAAAAGAACTCAGGCTTTTTAATAAGAAAACCAATGCAGAGGAATATTTCGAGAAAAACTGAATCGTAATTTTC
GATTCGGATTAAAGAAACGT

Downstream 100 bases:

>100_bases
GATTTACAAAACAATTAAAGACCACAAAACGTAGATTAGGCGTCCAATGAGGTTGAATCTATGATAAATTAAAGTTGTTG
AAAAAATCCATCTACGACTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MKRIFYLFLFLFFLSGILFANEEDESFPESNQDQVPLSPTDAARRKIQITALNTETVNLIRANNLSKASINIDKIKKLDE
NSVEYHYLKGSYLYAQGRYPQSKNSLLKAIQIHSSHDPSYYLLGMIFVQRNKWAKSLEYFQKAVELSNYNPFYRINLALA
YFETGNFLRAKAEAERAIELKPNFRAAKLLLLKSNFLLGNKADAYSQCVDFVKEGFISKEYMLIHARLVIEIHQNYRKAI
KIYSQYGELPLHEKRFLAQAYYNTGNYRAAAAAYQSVIQLKIVEEEDKIQYIRSLSFIKDYKRLESFVAFWLQEEPDKRK
KIQEALDIAELLKENDSKVFHMFPSRSPY

Sequences:

>Translated_349_residues
MKRIFYLFLFLFFLSGILFANEEDESFPESNQDQVPLSPTDAARRKIQITALNTETVNLIRANNLSKASINIDKIKKLDE
NSVEYHYLKGSYLYAQGRYPQSKNSLLKAIQIHSSHDPSYYLLGMIFVQRNKWAKSLEYFQKAVELSNYNPFYRINLALA
YFETGNFLRAKAEAERAIELKPNFRAAKLLLLKSNFLLGNKADAYSQCVDFVKEGFISKEYMLIHARLVIEIHQNYRKAI
KIYSQYGELPLHEKRFLAQAYYNTGNYRAAAAAYQSVIQLKIVEEEDKIQYIRSLSFIKDYKRLESFVAFWLQEEPDKRK
KIQEALDIAELLKENDSKVFHMFPSRSPY
>Mature_349_residues
MKRIFYLFLFLFFLSGILFANEEDESFPESNQDQVPLSPTDAARRKIQITALNTETVNLIRANNLSKASINIDKIKKLDE
NSVEYHYLKGSYLYAQGRYPQSKNSLLKAIQIHSSHDPSYYLLGMIFVQRNKWAKSLEYFQKAVELSNYNPFYRINLALA
YFETGNFLRAKAEAERAIELKPNFRAAKLLLLKSNFLLGNKADAYSQCVDFVKEGFISKEYMLIHARLVIEIHQNYRKAI
KIYSQYGELPLHEKRFLAQAYYNTGNYRAAAAAYQSVIQLKIVEEEDKIQYIRSLSFIKDYKRLESFVAFWLQEEPDKRK
KIQEALDIAELLKENDSKVFHMFPSRSPY

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40859; Mature: 40859

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIFYLFLFLFFLSGILFANEEDESFPESNQDQVPLSPTDAARRKIQITALNTETVNLI
CHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEECCCEEEEE
RANNLSKASINIDKIKKLDENSVEYHYLKGSYLYAQGRYPQSKNSLLKAIQIHSSHDPSY
ECCCCCCCCCCHHHHHHCCCCCCEEEEEECEEEEEECCCCCCHHHHHHHHHHCCCCCCCE
YLLGMIFVQRNKWAKSLEYFQKAVELSNYNPFYRINLALAYFETGNFLRAKAEAERAIEL
EEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCEEEEHHHHCCEEEE
KPNFRAAKLLLLKSNFLLGNKADAYSQCVDFVKEGFISKEYMLIHARLVIEIHQNYRKAI
CCCCHHHEEEEEECCCEECCCCHHHHHHHHHHHHCCCCCHHEEEEHHHHHHHHHHHHHHH
KIYSQYGELPLHEKRFLAQAYYNTGNYRAAAAAYQSVIQLKIVEEEDKIQYIRSLSFIKD
HHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHH
YKRLESFVAFWLQEEPDKRKKIQEALDIAELLKENDSKVFHMFPSRSPY
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
>Mature Secondary Structure
MKRIFYLFLFLFFLSGILFANEEDESFPESNQDQVPLSPTDAARRKIQITALNTETVNLI
CHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEECCCEEEEE
RANNLSKASINIDKIKKLDENSVEYHYLKGSYLYAQGRYPQSKNSLLKAIQIHSSHDPSY
ECCCCCCCCCCHHHHHHCCCCCCEEEEEECEEEEEECCCCCCHHHHHHHHHHCCCCCCCE
YLLGMIFVQRNKWAKSLEYFQKAVELSNYNPFYRINLALAYFETGNFLRAKAEAERAIEL
EEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCEEEEHHHHCCEEEE
KPNFRAAKLLLLKSNFLLGNKADAYSQCVDFVKEGFISKEYMLIHARLVIEIHQNYRKAI
CCCCHHHEEEEEECCCEECCCCHHHHHHHHHHHHCCCCCHHEEEEHHHHHHHHHHHHHHH
KIYSQYGELPLHEKRFLAQAYYNTGNYRAAAAAYQSVIQLKIVEEEDKIQYIRSLSFIKD
HHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHH
YKRLESFVAFWLQEEPDKRKKIQEALDIAELLKENDSKVFHMFPSRSPY
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA