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The map label for this gene is 45656170

Identifier: 45656170

GI number: 45656170

Start: 301964

End: 302323

Strand: Direct

Name: 45656170

Synonym: LIC10265

Alternate gene names: NA

Gene position: 301964-302323 (Clockwise)

Preceding gene: 45656169

Following gene: 45656177

Centisome position: 7.06

GC content: 38.06

Gene sequence:

>360_bases
ATGGGTGATTGTAAAAGATTTTCTTCAGCTAAACAAGCGGCTTACTACGCTGGTTTGGTTCCGAGAGTTGACATTTCAGG
AGACACGGTTCGATACGGAAGAATCATAAATCGAGGTTGTCATTCAATTCGAAGGGTGATTGTTCAAGCGGCTTGGAGTC
TGGTTCGTTGTCAACACGGTGGTAAGGTAAAAGAGTTCTATCAAAGGTTATACCTTAAAAAAGGTGCTAAAAAATCGATC
ATCGCTACTTCACGTAAAATGATCGAAGTTCTTTACGTAATGATTCGAACCGGAAAACTTTTCGATTCTATGCCTGAGAA
TATATTAAATCGAAAATTAACTCAATATGGTCTTATGTAA

Upstream 100 bases:

>100_bases
TTCAGACGATCATGTCTATGCCTGGAATTGGAATGATTACTTCTTTGGCGATCAAAGCAAACTCAATATCTCACTCCCTA
TGGGTCGTTCGATAAGTTAC

Downstream 100 bases:

>100_bases
AAAAAATAACGGGAGGGCTTGACACAAGAAACATAGGAGAGAGCGTTGTGCTGAGTTTTCCCTATTTTTGGGTGGGTGTT
GGGCGGGTGGTGGAAAGGCT

Product: transposase, ISlin1

Products: NA

Alternate protein names: ISlin1 Transposase

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MGDCKRFSSAKQAAYYAGLVPRVDISGDTVRYGRIINRGCHSIRRVIVQAAWSLVRCQHGGKVKEFYQRLYLKKGAKKSI
IATSRKMIEVLYVMIRTGKLFDSMPENILNRKLTQYGLM

Sequences:

>Translated_119_residues
MGDCKRFSSAKQAAYYAGLVPRVDISGDTVRYGRIINRGCHSIRRVIVQAAWSLVRCQHGGKVKEFYQRLYLKKGAKKSI
IATSRKMIEVLYVMIRTGKLFDSMPENILNRKLTQYGLM
>Mature_118_residues
GDCKRFSSAKQAAYYAGLVPRVDISGDTVRYGRIINRGCHSIRRVIVQAAWSLVRCQHGGKVKEFYQRLYLKKGAKKSII
ATSRKMIEVLYVMIRTGKLFDSMPENILNRKLTQYGLM

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13619; Mature: 13488

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDCKRFSSAKQAAYYAGLVPRVDISGDTVRYGRIINRGCHSIRRVIVQAAWSLVRCQHG
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GKVKEFYQRLYLKKGAKKSIIATSRKMIEVLYVMIRTGKLFDSMPENILNRKLTQYGLM
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GDCKRFSSAKQAAYYAGLVPRVDISGDTVRYGRIINRGCHSIRRVIVQAAWSLVRCQHG
CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GKVKEFYQRLYLKKGAKKSIIATSRKMIEVLYVMIRTGKLFDSMPENILNRKLTQYGLM
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA