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The map label for this gene is nudF [H]

Identifier: 45656162

GI number: 45656162

Start: 294847

End: 295395

Strand: Direct

Name: nudF [H]

Synonym: LIC10257

Alternate gene names: 45656162

Gene position: 294847-295395 (Clockwise)

Preceding gene: 45656161

Following gene: 45656163

Centisome position: 6.89

GC content: 37.52

Gene sequence:

>549_bases
ATGAAATACTGTAGTTCTTGCGGATCATCCGTCACGTATAAAATACCCGAAGGAGATAATCGGTCCAGACACGTATGTGA
TCAATGTGGAACGATTCATTATCAAAATCCGAAGATAATAGTCGGGAGTATACCGATTTGGGAAAATCGAATTCTACTTT
GTAGACGAGCTATCGAACCCAGAAAAGGATTTTGGACTTTACCCGCGGGATTTTTGGAAAACAGAGAAACGGTAGAAGAA
GGTGCAATTCGGGAAACTAAAGAAGAAGCAAATGCAGAAATCAATATTCTCGGACTGCAGAGTGTCTATAGCATTCCGCA
CATTAGTCAGATTTATATGTTTTTTTTAGCGAATTTAGTAAATGGAAAATTCTCAGTAAGTTCCGAGTCTGAAGAGATAA
AACTTTTTTCTATAGAGGAAATTCCTTGGGAGGAATTAGCGTTTACTTCGGTATCTTTTGCACTTAGGAAATACGTGGAT
TCTTCCGTTAAAAATTCGCTTCACTTAGGGAATACTAGAGATCGTAAAAATCTTCCGAAAGAATCTTAA

Upstream 100 bases:

>100_bases
CTCCCAATTTGCTTCTTGCTACGGTAGGAGGGACTTTGATCTTCTTGACACTTTGGTTATTGTTGGAAGCGGTATTAACT
TGGAATCGCATTAGAAAAGT

Downstream 100 bases:

>100_bases
AGAATTCCAAAAACCTTTCTAAAATAACGTGAGTTCAGCGGTTGAAAAATCTGGCGAATCCGGCTTTGCCGGACCGGGCT
CTCAGCTTTGGTCAAGTTAT

Product: MutT/nudix family protein

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MKYCSSCGSSVTYKIPEGDNRSRHVCDQCGTIHYQNPKIIVGSIPIWENRILLCRRAIEPRKGFWTLPAGFLENRETVEE
GAIRETKEEANAEINILGLQSVYSIPHISQIYMFFLANLVNGKFSVSSESEEIKLFSIEEIPWEELAFTSVSFALRKYVD
SSVKNSLHLGNTRDRKNLPKES

Sequences:

>Translated_182_residues
MKYCSSCGSSVTYKIPEGDNRSRHVCDQCGTIHYQNPKIIVGSIPIWENRILLCRRAIEPRKGFWTLPAGFLENRETVEE
GAIRETKEEANAEINILGLQSVYSIPHISQIYMFFLANLVNGKFSVSSESEEIKLFSIEEIPWEELAFTSVSFALRKYVD
SSVKNSLHLGNTRDRKNLPKES
>Mature_182_residues
MKYCSSCGSSVTYKIPEGDNRSRHVCDQCGTIHYQNPKIIVGSIPIWENRILLCRRAIEPRKGFWTLPAGFLENRETVEE
GAIRETKEEANAEINILGLQSVYSIPHISQIYMFFLANLVNGKFSVSSESEEIKLFSIEEIPWEELAFTSVSFALRKYVD
SSVKNSLHLGNTRDRKNLPKES

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 20734; Mature: 20734

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYCSSCGSSVTYKIPEGDNRSRHVCDQCGTIHYQNPKIIVGSIPIWENRILLCRRAIEP
CCCHHCCCCCEEEECCCCCCCCHHHHHHCCEEEECCCEEEEECCCCCCCHHHHHHHHCCC
RKGFWTLPAGFLENRETVEEGAIRETKEEANAEINILGLQSVYSIPHISQIYMFFLANLV
CCCEEECCHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHH
NGKFSVSSESEEIKLFSIEEIPWEELAFTSVSFALRKYVDSSVKNSLHLGNTRDRKNLPK
CCCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
ES
CC
>Mature Secondary Structure
MKYCSSCGSSVTYKIPEGDNRSRHVCDQCGTIHYQNPKIIVGSIPIWENRILLCRRAIEP
CCCHHCCCCCEEEECCCCCCCCHHHHHHCCEEEECCCEEEEECCCCCCCHHHHHHHHCCC
RKGFWTLPAGFLENRETVEEGAIRETKEEANAEINILGLQSVYSIPHISQIYMFFLANLV
CCCEEECCHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHH
NGKFSVSSESEEIKLFSIEEIPWEELAFTSVSFALRKYVDSSVKNSLHLGNTRDRKNLPK
CCCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
ES
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]