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The map label for this gene is yacL [H]

Identifier: 45656120

GI number: 45656120

Start: 244146

End: 245177

Strand: Direct

Name: yacL [H]

Synonym: LIC10215

Alternate gene names: 45656120

Gene position: 244146-245177 (Clockwise)

Preceding gene: 45656119

Following gene: 45656121

Centisome position: 5.71

GC content: 37.5

Gene sequence:

>1032_bases
ATGATTCATTTCTACAAAGTACTCACGTCTCTGTTCCTTTCTGGGATTACATTTGCAGTAACACATAAACAAGCAGGAGA
TATTTATTTAGCCGGACCAATTGCCGGGGTTGTTTTGTTAGTTTCCTTTATTCTTCTTTACGGAGAATCTAATTTTTTTC
CAAAACTCAAAGCAGATGTACTTTTTTGTGCTGGATTGGGCGCGCTTCTTGGGCTTGCGATTGCTTGGTTTGTAGGTGCA
GCTGTTCATTTTGAAGAATTGAACGTAGCTTTTTATTTCTTATTTGCGCTTTTTGGAATCCTTTCTGGAGTTGCGTTTGC
TAAAGAACCTGGTCTTGGAATTTTCGGCGGTGGTGGTTCAGGCAACGGCTTTGGAGTTGGTATCGAAAAAGAAGAAGTCA
GAGATAAAATTCTAGATACTTCCGTTGTAATTGACGGAAGAATTTTAGATATTGCAGATACTCATTTCTTAGATGGTCCT
TTAATTCTTCCAAACTTTGTGTTGAGAGAAATTCAACTTATCAGCGATTCTTCTGATCCGATCAAAAGGGCGAGGGGAAG
AAGAGGTCTTGAAATGTTGAATAAACTCCAACGTAAAGGATCTATAGAAGTAAAAATTACTTATAAAGATTATTCTGATA
CACGTGAAGTAGATGCAAAACTAATTAAACTAGCTCGTGATACTGGTGGTAAGATCGTTACTAATGATTTTAATTTGAAT
AAAGTGGCTGAACTGCAAGGAGTAAAGGTATTAAACTTAAATACTTTAGCAAACGCTTTAAAACCAGTCGTTCTACCTGG
AGAAGAACTTGGAATTCAAGTGATCAAAGAGGGTAAGGATGAGAATCAAGGAATTGGTTATTTAGAAGATGGTACGATGG
TCGTGATCGAAAATGGTGGTCATCTTGTTGGGAAAGAGGTCAAAGTGACAGTAACTTCTATTATCCAAACTGCAGCTGGA
AAAATGATTTTTACAAAAGCGAATTCGAATGGAGTTTCCGAGAAAGGAAATCGTCAACCCCATTCCTCTTGA

Upstream 100 bases:

>100_bases
TTTCCGATGTATTAGCGAGCACCCTCTCTCCTAGTGAAAAAAAGGCAGAAGAAGAGTAAAGTTCCGCAAAAAACTCAAAT
ACAAATTAAGGATTTGAGTT

Downstream 100 bases:

>100_bases
ATCGATTGACTTTCCACTTTAGAGTAAAATAATTGAAACAGAATTCCCAAGGAGCAATCAAATGCAGGCCCAGACTCAGG
TAAAAGGTTTGAAGGAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MIHFYKVLTSLFLSGITFAVTHKQAGDIYLAGPIAGVVLLVSFILLYGESNFFPKLKADVLFCAGLGALLGLAIAWFVGA
AVHFEELNVAFYFLFALFGILSGVAFAKEPGLGIFGGGGSGNGFGVGIEKEEVRDKILDTSVVIDGRILDIADTHFLDGP
LILPNFVLREIQLISDSSDPIKRARGRRGLEMLNKLQRKGSIEVKITYKDYSDTREVDAKLIKLARDTGGKIVTNDFNLN
KVAELQGVKVLNLNTLANALKPVVLPGEELGIQVIKEGKDENQGIGYLEDGTMVVIENGGHLVGKEVKVTVTSIIQTAAG
KMIFTKANSNGVSEKGNRQPHSS

Sequences:

>Translated_343_residues
MIHFYKVLTSLFLSGITFAVTHKQAGDIYLAGPIAGVVLLVSFILLYGESNFFPKLKADVLFCAGLGALLGLAIAWFVGA
AVHFEELNVAFYFLFALFGILSGVAFAKEPGLGIFGGGGSGNGFGVGIEKEEVRDKILDTSVVIDGRILDIADTHFLDGP
LILPNFVLREIQLISDSSDPIKRARGRRGLEMLNKLQRKGSIEVKITYKDYSDTREVDAKLIKLARDTGGKIVTNDFNLN
KVAELQGVKVLNLNTLANALKPVVLPGEELGIQVIKEGKDENQGIGYLEDGTMVVIENGGHLVGKEVKVTVTSIIQTAAG
KMIFTKANSNGVSEKGNRQPHSS
>Mature_343_residues
MIHFYKVLTSLFLSGITFAVTHKQAGDIYLAGPIAGVVLLVSFILLYGESNFFPKLKADVLFCAGLGALLGLAIAWFVGA
AVHFEELNVAFYFLFALFGILSGVAFAKEPGLGIFGGGGSGNGFGVGIEKEEVRDKILDTSVVIDGRILDIADTHFLDGP
LILPNFVLREIQLISDSSDPIKRARGRRGLEMLNKLQRKGSIEVKITYKDYSDTREVDAKLIKLARDTGGKIVTNDFNLN
KVAELQGVKVLNLNTLANALKPVVLPGEELGIQVIKEGKDENQGIGYLEDGTMVVIENGGHLVGKEVKVTVTSIIQTAAG
KMIFTKANSNGVSEKGNRQPHSS

Specific function: Unknown

COG id: COG4956

COG function: function code R; Integral membrane protein (PIN domain superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 36921; Mature: 36921

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHFYKVLTSLFLSGITFAVTHKQAGDIYLAGPIAGVVLLVSFILLYGESNFFPKLKADV
CCHHHHHHHHHHHCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LFCAGLGALLGLAIAWFVGAAVHFEELNVAFYFLFALFGILSGVAFAKEPGLGIFGGGGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEECCCC
GNGFGVGIEKEEVRDKILDTSVVIDGRILDIADTHFLDGPLILPNFVLREIQLISDSSDP
CCCEECCCCHHHHHHHHHCCEEEECCEEEEEECCCCCCCCEEHHHHHHHHHHHHCCCCCH
IKRARGRRGLEMLNKLQRKGSIEVKITYKDYSDTREVDAKLIKLARDTGGKIVTNDFNLN
HHHHHCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC
KVAELQGVKVLNLNTLANALKPVVLPGEELGIQVIKEGKDENQGIGYLEDGTMVVIENGG
HHHHHCCEEEEEHHHHHHHHCCEECCCHHHHHHHEECCCCCCCCCCEEECCCEEEECCCC
HLVGKEVKVTVTSIIQTAAGKMIFTKANSNGVSEKGNRQPHSS
EEECCEEEEHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIHFYKVLTSLFLSGITFAVTHKQAGDIYLAGPIAGVVLLVSFILLYGESNFFPKLKADV
CCHHHHHHHHHHHCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LFCAGLGALLGLAIAWFVGAAVHFEELNVAFYFLFALFGILSGVAFAKEPGLGIFGGGGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEECCCC
GNGFGVGIEKEEVRDKILDTSVVIDGRILDIADTHFLDGPLILPNFVLREIQLISDSSDP
CCCEECCCCHHHHHHHHHCCEEEECCEEEEEECCCCCCCCEEHHHHHHHHHHHHCCCCCH
IKRARGRRGLEMLNKLQRKGSIEVKITYKDYSDTREVDAKLIKLARDTGGKIVTNDFNLN
HHHHHCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC
KVAELQGVKVLNLNTLANALKPVVLPGEELGIQVIKEGKDENQGIGYLEDGTMVVIENGG
HHHHHCCEEEEEHHHHHHHHCCEECCCHHHHHHHEECCCCCCCCCCEEECCCEEEECCCC
HLVGKEVKVTVTSIIQTAAGKMIFTKANSNGVSEKGNRQPHSS
EEECCEEEEHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 7510287 [H]