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The map label for this gene is rsgA [H]

Identifier: 45656031

GI number: 45656031

Start: 141874

End: 142830

Strand: Direct

Name: rsgA [H]

Synonym: LIC10121

Alternate gene names: 45656031

Gene position: 141874-142830 (Clockwise)

Preceding gene: 45656027

Following gene: 45656032

Centisome position: 3.32

GC content: 38.87

Gene sequence:

>957_bases
ATGTTAGAGTCAGATTCCTCAGTCAAAGAATTTTTTACCATCTCCCGAGTTTACGGAGCGTACTATGAAATTTATTCTTC
AAAACGAGGAATCGTAAGAGCTTTTCTACGTGGAAGGTTAAGAACTGTTGCCGCTCAAGAAAGACATCCTTTTGTTGTAG
GGGATAAAATTCTAGCTGAGTTTTCAACGGGAAAAGACTGGGTAATTTGCGAAAGACTGGAAAGAAGTTCTTTCCTAACG
CGTAAAAGCAGAGAAGGGGATACGCAGGTTTTATGTGCCAATGTGGATCAAACGGCGGTTCTTGCTTCTTTAAAGTCTCC
CGAAACAAAAGACGGTTTCTTGGATAGATGTTTGGCGGCGGTTTTTACATCTGGGACACAACCTTTGATTTTATTTACAA
AATTGGATCTCGTTTCCGAAGTTGAAGCTGAAAACCGTATGAAAGTCTATCGAAACTTGGGGTATAAGGTGTTAGGCATT
TCCTGTACAACTGGTCAAGGAATTCCTGAATTACAAAAATATCTGCACGGAAAAATGACGTTTCTAGTCGGAAATTCAGG
AGTTGGCAAGTCTACTTTAATCAATCTATTGACTCAAACGCAGGTTCAGAAAACTTCCGGGATTAGTATTTCGAAAGATA
AAGGAAAACATACCACTACAAATTCTCTTTTGCTTATTTTAGAAGATGGAACGGCGTTAATCGATTCTCCAGGAATTAAA
GAATGGGGGATTCTCCATTTAAAAAAAGAGGAAATTCTGGAAAGTTTTCCCGAACTTTCCAGTCAAAAAAAACATTGTGA
AGAACCAAATTGTTGTAAATTATCTTCCGACTGCGCGATGTTATCCGCTTTAGAAAAAGAAGCGTTAACGTCTGAAAGAA
AGAAGAGCTTAGAATCGATGCTTACGAGCCTTGATAACCCGCATAGAGTCACACGGAGAGATAGGATTTCAAAATGA

Upstream 100 bases:

>100_bases
AATGCAAAGATAAGCTGAAAACAGACTATCAGAAGAATTAAATATACAATGGGCCCTAAGGCGATGAGTCTTCGGATCGT
CATTACAGTGCATAGAGATC

Downstream 100 bases:

>100_bases
AAGTGACACATTCTTGTTTGGAGTTTGATTCGATTGAAGGTCTGATTGATTTTGCTAGAGAGTTTGAAACTGGATCCATG
ATTCGGTTTCTTTCTCCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MLESDSSVKEFFTISRVYGAYYEIYSSKRGIVRAFLRGRLRTVAAQERHPFVVGDKILAEFSTGKDWVICERLERSSFLT
RKSREGDTQVLCANVDQTAVLASLKSPETKDGFLDRCLAAVFTSGTQPLILFTKLDLVSEVEAENRMKVYRNLGYKVLGI
SCTTGQGIPELQKYLHGKMTFLVGNSGVGKSTLINLLTQTQVQKTSGISISKDKGKHTTTNSLLLILEDGTALIDSPGIK
EWGILHLKKEEILESFPELSSQKKHCEEPNCCKLSSDCAMLSALEKEALTSERKKSLESMLTSLDNPHRVTRRDRISK

Sequences:

>Translated_318_residues
MLESDSSVKEFFTISRVYGAYYEIYSSKRGIVRAFLRGRLRTVAAQERHPFVVGDKILAEFSTGKDWVICERLERSSFLT
RKSREGDTQVLCANVDQTAVLASLKSPETKDGFLDRCLAAVFTSGTQPLILFTKLDLVSEVEAENRMKVYRNLGYKVLGI
SCTTGQGIPELQKYLHGKMTFLVGNSGVGKSTLINLLTQTQVQKTSGISISKDKGKHTTTNSLLLILEDGTALIDSPGIK
EWGILHLKKEEILESFPELSSQKKHCEEPNCCKLSSDCAMLSALEKEALTSERKKSLESMLTSLDNPHRVTRRDRISK
>Mature_318_residues
MLESDSSVKEFFTISRVYGAYYEIYSSKRGIVRAFLRGRLRTVAAQERHPFVVGDKILAEFSTGKDWVICERLERSSFLT
RKSREGDTQVLCANVDQTAVLASLKSPETKDGFLDRCLAAVFTSGTQPLILFTKLDLVSEVEAENRMKVYRNLGYKVLGI
SCTTGQGIPELQKYLHGKMTFLVGNSGVGKSTLINLLTQTQVQKTSGISISKDKGKHTTTNSLLLILEDGTALIDSPGIK
EWGILHLKKEEILESFPELSSQKKHCEEPNCCKLSSDCAMLSALEKEALTSERKKSLESMLTSLDNPHRVTRRDRISK

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=301, Percent_Identity=31.8936877076412, Blast_Score=140, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 35479; Mature: 35479

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLESDSSVKEFFTISRVYGAYYEIYSSKRGIVRAFLRGRLRTVAAQERHPFVVGDKILAE
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHH
FSTGKDWVICERLERSSFLTRKSREGDTQVLCANVDQTAVLASLKSPETKDGFLDRCLAA
HCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHH
VFTSGTQPLILFTKLDLVSEVEAENRMKVYRNLGYKVLGISCTTGQGIPELQKYLHGKMT
HHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCEE
FLVGNSGVGKSTLINLLTQTQVQKTSGISISKDKGKHTTTNSLLLILEDGTALIDSPGIK
EEEECCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEEECCCEEECCCCCC
EWGILHLKKEEILESFPELSSQKKHCEEPNCCKLSSDCAMLSALEKEALTSERKKSLESM
CCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LTSLDNPHRVTRRDRISK
HHHCCCCHHHHHHHCCCC
>Mature Secondary Structure
MLESDSSVKEFFTISRVYGAYYEIYSSKRGIVRAFLRGRLRTVAAQERHPFVVGDKILAE
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHH
FSTGKDWVICERLERSSFLTRKSREGDTQVLCANVDQTAVLASLKSPETKDGFLDRCLAA
HCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHH
VFTSGTQPLILFTKLDLVSEVEAENRMKVYRNLGYKVLGISCTTGQGIPELQKYLHGKMT
HHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCEE
FLVGNSGVGKSTLINLLTQTQVQKTSGISISKDKGKHTTTNSLLLILEDGTALIDSPGIK
EEEECCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEEECCCEEECCCCCC
EWGILHLKKEEILESFPELSSQKKHCEEPNCCKLSSDCAMLSALEKEALTSERKKSLESM
CCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LTSLDNPHRVTRRDRISK
HHHCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA