| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is 45656014
Identifier: 45656014
GI number: 45656014
Start: 122810
End: 123415
Strand: Direct
Name: 45656014
Synonym: LIC10103
Alternate gene names: NA
Gene position: 122810-123415 (Clockwise)
Preceding gene: 45656010
Following gene: 45656015
Centisome position: 2.87
GC content: 37.79
Gene sequence:
>606_bases ATGGAAAACCATATTTCCTTCGCAGAAGTTTTTTCTGAAAAATTTCTATCCTTATTGACCGATCTTAGAGGATATCGAAG CCCATTTGGCAAAACCGTAGGAAATCCTTCTGAACTCATTCAAGAATGTATTCAAAAGGCCTCGATTAGAGCCGGTGCAA TTGGACTTGGGCTTTCTATTTCTAAAAGACATTTCGGTTATTTGACTTTGTTACCGGAAATGATCTTATTTTATAGAATT CAAGGTCATCTCGTAAAAGATATTGCCGCTCTTTATGGAAAAGAATCTCAAGTATCTCCCGAGATTATGAGTTATTGTAT TTTTCCGGATAAAAATCACGCCTTGATTCGTTCTATCGTTAGAGACGTTGGCACCAGAGTACTCGTTAGACCGGCTACTT TGGAAATCTTTCGTTCAATCGGGTTTCATTTGGGATGGAAATTGTTTCAAAGGAATGGAAATTTTTCTTCAAGATTTTCC TGGTTGCCGTATATCGGCTCCGTTTTAAACGGAGGGATTTCTTTTCTAGATACAAAAACTACTGGTAGAAGGGCTAGGGA CCTTTTTCAAAAGGAATTGGAATTTACAGGCCGATTTGAACAATAG
Upstream 100 bases:
>100_bases ATTTAACTCTTCACTGATTCGAAGGTATTTTTCTTGTATTTTTTCAAGTCTATCTATCATTGAATGAACTCGACCTTTCC TTTATAAATCAACGCACTCT
Downstream 100 bases:
>100_bases ACTTGGAAAAAGTTTTTTATTATCCTGGAAATTTTTATAATAACGTTACGGCTTTATTATAAAAAATAAAAAAGTTTCTG AGTTGGACTATCAGTATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MENHISFAEVFSEKFLSLLTDLRGYRSPFGKTVGNPSELIQECIQKASIRAGAIGLGLSISKRHFGYLTLLPEMILFYRI QGHLVKDIAALYGKESQVSPEIMSYCIFPDKNHALIRSIVRDVGTRVLVRPATLEIFRSIGFHLGWKLFQRNGNFSSRFS WLPYIGSVLNGGISFLDTKTTGRRARDLFQKELEFTGRFEQ
Sequences:
>Translated_201_residues MENHISFAEVFSEKFLSLLTDLRGYRSPFGKTVGNPSELIQECIQKASIRAGAIGLGLSISKRHFGYLTLLPEMILFYRI QGHLVKDIAALYGKESQVSPEIMSYCIFPDKNHALIRSIVRDVGTRVLVRPATLEIFRSIGFHLGWKLFQRNGNFSSRFS WLPYIGSVLNGGISFLDTKTTGRRARDLFQKELEFTGRFEQ >Mature_201_residues MENHISFAEVFSEKFLSLLTDLRGYRSPFGKTVGNPSELIQECIQKASIRAGAIGLGLSISKRHFGYLTLLPEMILFYRI QGHLVKDIAALYGKESQVSPEIMSYCIFPDKNHALIRSIVRDVGTRVLVRPATLEIFRSIGFHLGWKLFQRNGNFSSRFS WLPYIGSVLNGGISFLDTKTTGRRARDLFQKELEFTGRFEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22855; Mature: 22855
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENHISFAEVFSEKFLSLLTDLRGYRSPFGKTVGNPSELIQECIQKASIRAGAIGLGLSI CCCCHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHCCCCHHCCCCEE SKRHFGYLTLLPEMILFYRIQGHLVKDIAALYGKESQVSPEIMSYCIFPDKNHALIRSIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHH RDVGTRVLVRPATLEIFRSIGFHLGWKLFQRNGNFSSRFSWLPYIGSVLNGGISFLDTKT HHHCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHEEECCC TGRRARDLFQKELEFTGRFEQ CCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MENHISFAEVFSEKFLSLLTDLRGYRSPFGKTVGNPSELIQECIQKASIRAGAIGLGLSI CCCCHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHCCCCHHCCCCEE SKRHFGYLTLLPEMILFYRIQGHLVKDIAALYGKESQVSPEIMSYCIFPDKNHALIRSIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHH RDVGTRVLVRPATLEIFRSIGFHLGWKLFQRNGNFSSRFSWLPYIGSVLNGGISFLDTKT HHHCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHEEECCC TGRRARDLFQKELEFTGRFEQ CCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA