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The map label for this gene is 45655993

Identifier: 45655993

GI number: 45655993

Start: 97126

End: 97659

Strand: Reverse

Name: 45655993

Synonym: LIC10079

Alternate gene names: NA

Gene position: 97659-97126 (Counterclockwise)

Preceding gene: 45655994

Following gene: 45655992

Centisome position: 2.28

GC content: 40.45

Gene sequence:

>534_bases
ATGCGGGAAATACTTGCACAGCCTGCAAATCATATCTTATTGACTACTGTGAATCTAGACTCCAAACCCCACAGACAACT
ACTTACGGATTCTCTTTTTTTGGAAGTATTGCAAAAAGCGAATGCCTCCCCTCGTAAAAGAGCAAACCACAACTTTCACG
AACTTTCCGAAGTATATCAAAGATTTTTAAACGTGCTCACACGTGATACTTACGTACAAGCGCACAGACATAAATTCCCA
CCAAAACCGGAAACCTTTTTGGCGTTAAAAGGAGATCTAGGATTTATCCTTTTTAATGATGATGGCTCAATCCAAGAAAC
TCATTACCTAAGTTCCCAAGGTCCAGTATATGGAATCGATATTGTCCCTGGAGTATTTCATACTCTCGTTTGTCTTTCTG
AAAACGCGATTTGTTTTGAAGGAAAGTCAGGGCCCTATGAGCCCACAACGGATAAAGATTTTGCTTCCTGGGCTCCGGCT
GAGACCGACCCAAATCGGAACGAATATTTGGATAAGTTAAGAAAACTTTTTTAA

Upstream 100 bases:

>100_bases
AAAATGGATAAATGTCACTGTGCACAAGTCGCTTTCGAAACTATAGTTGAAACCGCGAGATACGAAGGTGTAGAATATCA
AGAAATTATAGAAAGGGTAA

Downstream 100 bases:

>100_bases
TTTGAATTCAAATTTGTTTTTTACTTTTCTTATTCTAAATTCAAGTTCCTATTTTTAAAATATAAGGTTATAAAACAAAA
CCTTGTAACGAAAGTGTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MREILAQPANHILLTTVNLDSKPHRQLLTDSLFLEVLQKANASPRKRANHNFHELSEVYQRFLNVLTRDTYVQAHRHKFP
PKPETFLALKGDLGFILFNDDGSIQETHYLSSQGPVYGIDIVPGVFHTLVCLSENAICFEGKSGPYEPTTDKDFASWAPA
ETDPNRNEYLDKLRKLF

Sequences:

>Translated_177_residues
MREILAQPANHILLTTVNLDSKPHRQLLTDSLFLEVLQKANASPRKRANHNFHELSEVYQRFLNVLTRDTYVQAHRHKFP
PKPETFLALKGDLGFILFNDDGSIQETHYLSSQGPVYGIDIVPGVFHTLVCLSENAICFEGKSGPYEPTTDKDFASWAPA
ETDPNRNEYLDKLRKLF
>Mature_177_residues
MREILAQPANHILLTTVNLDSKPHRQLLTDSLFLEVLQKANASPRKRANHNFHELSEVYQRFLNVLTRDTYVQAHRHKFP
PKPETFLALKGDLGFILFNDDGSIQETHYLSSQGPVYGIDIVPGVFHTLVCLSENAICFEGKSGPYEPTTDKDFASWAPA
ETDPNRNEYLDKLRKLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20209; Mature: 20209

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREILAQPANHILLTTVNLDSKPHRQLLTDSLFLEVLQKANASPRKRANHNFHELSEVYQ
CCCHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHH
RFLNVLTRDTYVQAHRHKFPPKPETFLALKGDLGFILFNDDGSIQETHYLSSQGPVYGID
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEECCCCCCCHHEEECCCCCEEEEE
IVPGVFHTLVCLSENAICFEGKSGPYEPTTDKDFASWAPAETDPNRNEYLDKLRKLF
HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
>Mature Secondary Structure
MREILAQPANHILLTTVNLDSKPHRQLLTDSLFLEVLQKANASPRKRANHNFHELSEVYQ
CCCHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHH
RFLNVLTRDTYVQAHRHKFPPKPETFLALKGDLGFILFNDDGSIQETHYLSSQGPVYGID
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEECCCCCCCHHEEECCCCCEEEEE
IVPGVFHTLVCLSENAICFEGKSGPYEPTTDKDFASWAPAETDPNRNEYLDKLRKLF
HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA