Click here to switch to the map view.

The map label for this gene is 45655928

Identifier: 45655928

GI number: 45655928

Start: 18319

End: 19407

Strand: Reverse

Name: 45655928

Synonym: LIC10014

Alternate gene names: NA

Gene position: 19407-18319 (Counterclockwise)

Preceding gene: 45655930

Following gene: 45655925

Centisome position: 0.45

GC content: 31.5

Gene sequence:

>1089_bases
ATGGCAACTAAAACTAAAGAATATAAAAATTCCATAGAATTCTTAAATGATTGGAATCAAAAATTACCTCAAATTGTTTT
TGTAGCAGCCAAAGAATCTTACGAATTCGAAATTCTAGCAGAGAAATACAAAGACTCAATCCGAAAAACGGGGGAATCCC
ACGAAATTGTAATCTTTGTATCAGAACCAGGAGACTTTGAAAGATTTCAATCCGAAGCCTTTAACTTGGATATTTTCTCT
AATAGAAAATTATTTATCATCAAATCGGGACTCGAATTTTTTAAACCAATATCCACCGGAAAAGGAAAGAATAACGAATC
CTTACAAAAACAATTTTCAAACTTTCCGGATTCGATCCAACTTTTGATTCATTACAATCACTGGGAAGTTCCAAATAAAG
TACTTCAAATTTTTGGTGGAAAAGCAAACCTCATCAAAACTAAAAATTTTTATCCAAACGAAACCCGTGGCGGACTTTTA
CAAGCTTGCAAAGAAATCGGAGTTCAACTCGACGAAGATGCAATAGATGAATTCCTTCACAAAATTCCTCCGTCTATGGG
TGCATATCTTCAATCTCTTTCTAAACTGAAACTTTATCTTTCAAAAAAAATTTTTACCAAACAAGATATAGAAGATGTTT
TACTGTTCAGTGGAGAATTCAATTCTTCCGGTTTAGTAGATTTTTTCATGGAATCAGATCGGATTCGTTTTTTTAAGGAA
TTGAAAAAATTTCAAAGTGGGAAAGATTCTTTGCTTTTGTTTTTTTCAATTTTAAAAGAAAAAATAGATCAACTTCGAAA
ATACAAAATTATTTCCAAAAAATACGAAACTTCTCTTTCTGACGAAGAACTCTATGAATTTCTGGGAATTCAATCCTATA
GTCCTGCGAGAAAAAATTTTGTTCGTAACCGTCTTAAAAAAGAAGCGACCTTTTTTTCGGATAAAACAATTGGAGAACTT
TATGATTTTCTAATAGATATGAATATTCGAATCAAAACCAACTCGGAAAAAGAAGAATCTCTATTTTATTTTAAACGTCG
GATGGAAGATTTTTTCCTTCAACTTCGTCGGAAAGACCGAATTCTATAA

Upstream 100 bases:

>100_bases
TGATCGCAAAACAACGGTTTCCTGTAGAAATTCAAAATTATTTTTTTGAATTTAATAGAAACTTTCTAAAACGATCTTTA
TACTTTTAAGAAAAAATAGA

Downstream 100 bases:

>100_bases
TCTTTCTATAAATCGTTCTTTCCGAAATCCCGAGTATTTTAGCGGCTTTTTCCCGATTTCCGTTTACAAGAATTAAATTC
TTTTTGATAATCTCCCTTTC

Product: hypothetical protein

Products: diphosphate; DNAn+1

Alternate protein names: DNA-Directed DNA Polymerase Delta Subunit

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MATKTKEYKNSIEFLNDWNQKLPQIVFVAAKESYEFEILAEKYKDSIRKTGESHEIVIFVSEPGDFERFQSEAFNLDIFS
NRKLFIIKSGLEFFKPISTGKGKNNESLQKQFSNFPDSIQLLIHYNHWEVPNKVLQIFGGKANLIKTKNFYPNETRGGLL
QACKEIGVQLDEDAIDEFLHKIPPSMGAYLQSLSKLKLYLSKKIFTKQDIEDVLLFSGEFNSSGLVDFFMESDRIRFFKE
LKKFQSGKDSLLLFFSILKEKIDQLRKYKIISKKYETSLSDEELYEFLGIQSYSPARKNFVRNRLKKEATFFSDKTIGEL
YDFLIDMNIRIKTNSEKEESLFYFKRRMEDFFLQLRRKDRIL

Sequences:

>Translated_362_residues
MATKTKEYKNSIEFLNDWNQKLPQIVFVAAKESYEFEILAEKYKDSIRKTGESHEIVIFVSEPGDFERFQSEAFNLDIFS
NRKLFIIKSGLEFFKPISTGKGKNNESLQKQFSNFPDSIQLLIHYNHWEVPNKVLQIFGGKANLIKTKNFYPNETRGGLL
QACKEIGVQLDEDAIDEFLHKIPPSMGAYLQSLSKLKLYLSKKIFTKQDIEDVLLFSGEFNSSGLVDFFMESDRIRFFKE
LKKFQSGKDSLLLFFSILKEKIDQLRKYKIISKKYETSLSDEELYEFLGIQSYSPARKNFVRNRLKKEATFFSDKTIGEL
YDFLIDMNIRIKTNSEKEESLFYFKRRMEDFFLQLRRKDRIL
>Mature_361_residues
ATKTKEYKNSIEFLNDWNQKLPQIVFVAAKESYEFEILAEKYKDSIRKTGESHEIVIFVSEPGDFERFQSEAFNLDIFSN
RKLFIIKSGLEFFKPISTGKGKNNESLQKQFSNFPDSIQLLIHYNHWEVPNKVLQIFGGKANLIKTKNFYPNETRGGLLQ
ACKEIGVQLDEDAIDEFLHKIPPSMGAYLQSLSKLKLYLSKKIFTKQDIEDVLLFSGEFNSSGLVDFFMESDRIRFFKEL
KKFQSGKDSLLLFFSILKEKIDQLRKYKIISKKYETSLSDEELYEFLGIQSYSPARKNFVRNRLKKEATFFSDKTIGELY
DFLIDMNIRIKTNSEKEESLFYFKRRMEDFFLQLRRKDRIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 42700; Mature: 42568

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKTKEYKNSIEFLNDWNQKLPQIVFVAAKESYEFEILAEKYKDSIRKTGESHEIVIFV
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEE
SEPGDFERFQSEAFNLDIFSNRKLFIIKSGLEFFKPISTGKGKNNESLQKQFSNFPDSIQ
ECCCCHHHHHHHHCCEEEECCCEEEEEECCHHHHCCCCCCCCCCCHHHHHHHHCCCCEEE
LLIHYNHWEVPNKVLQIFGGKANLIKTKNFYPNETRGGLLQACKEIGVQLDEDAIDEFLH
EEEEECCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHH
KIPPSMGAYLQSLSKLKLYLSKKIFTKQDIEDVLLFSGEFNSSGLVDFFMESDRIRFFKE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEECCCCCCCCCCHHHHCCHHHHHHHH
LKKFQSGKDSLLLFFSILKEKIDQLRKYKIISKKYETSLSDEELYEFLGIQSYSPARKNF
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHH
VRNRLKKEATFFSDKTIGELYDFLIDMNIRIKTNSEKEESLFYFKRRMEDFFLQLRRKDR
HHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
IL
CC
>Mature Secondary Structure 
ATKTKEYKNSIEFLNDWNQKLPQIVFVAAKESYEFEILAEKYKDSIRKTGESHEIVIFV
CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEE
SEPGDFERFQSEAFNLDIFSNRKLFIIKSGLEFFKPISTGKGKNNESLQKQFSNFPDSIQ
ECCCCHHHHHHHHCCEEEECCCEEEEEECCHHHHCCCCCCCCCCCHHHHHHHHCCCCEEE
LLIHYNHWEVPNKVLQIFGGKANLIKTKNFYPNETRGGLLQACKEIGVQLDEDAIDEFLH
EEEEECCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHH
KIPPSMGAYLQSLSKLKLYLSKKIFTKQDIEDVLLFSGEFNSSGLVDFFMESDRIRFFKE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEECCCCCCCCCCHHHHCCHHHHHHHH
LKKFQSGKDSLLLFFSILKEKIDQLRKYKIISKKYETSLSDEELYEFLGIQSYSPARKNF
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHH
VRNRLKKEATFFSDKTIGELYDFLIDMNIRIKTNSEKEESLFYFKRRMEDFFLQLRRKDR
HHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
IL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA