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The map label for this gene is flaF [H]

Identifier: 45359235

GI number: 45359235

Start: 1613935

End: 1614312

Strand: Direct

Name: flaF [H]

Synonym: MMP1672

Alternate gene names: 45359235

Gene position: 1613935-1614312 (Clockwise)

Preceding gene: 45359234

Following gene: 45359236

Centisome position: 97.16

GC content: 32.01

Gene sequence:

>378_bases
TTGTTGTTGACTACAGTGCTGATATGTTCGATTTACATGTACAGTACTGTAGACCTAACGTCTGCAAAAGTAAATGATGC
TTATAACACGCATTCAGAATATTTGAAAAATAAATTAGATGAAAAAATAACTGTTGTATCAGTTGAACATTCATCAGAAA
ATATGAACATTACCCTTTTAAATGAAGGGCAATTAACACATGAATTAGATAATTGGGACGTTTTATACAACGGAACTCCT
GTGAATTTTACAATCACGTCTGGTGAACTGTATTTAGCACCTTTAGAAAGTGTAAATATTTCAGTAAATGCAAGTTCCCC
GGGAAGAATATCGATAGTTTCTGAATACGGAAACCAGTATTACTACAATTTAAACTAA

Upstream 100 bases:

>100_bases
ATATCAAGCGAAGTTTTAGATAAACTAGAATGGGAAATTAGAAGGATAAAAAGAGGCGCAGAGCAATACTATGGGATTTA
GTTCAACTGCGGGACTAACG

Downstream 100 bases:

>100_bases
AGATCCTTGTTTTTAGGATAACTTTTGCGTTGTGATTTAGATGGCATCCAATGTTTTCTCAGAAGTAATAATCTTTGTTA
GTGTTTTGATAATTACGGCC

Product: flagellar protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MLLTTVLICSIYMYSTVDLTSAKVNDAYNTHSEYLKNKLDEKITVVSVEHSSENMNITLLNEGQLTHELDNWDVLYNGTP
VNFTITSGELYLAPLESVNISVNASSPGRISIVSEYGNQYYYNLN

Sequences:

>Translated_125_residues
MLLTTVLICSIYMYSTVDLTSAKVNDAYNTHSEYLKNKLDEKITVVSVEHSSENMNITLLNEGQLTHELDNWDVLYNGTP
VNFTITSGELYLAPLESVNISVNASSPGRISIVSEYGNQYYYNLN
>Mature_125_residues
MLLTTVLICSIYMYSTVDLTSAKVNDAYNTHSEYLKNKLDEKITVVSVEHSSENMNITLLNEGQLTHELDNWDVLYNGTP
VNFTITSGELYLAPLESVNISVNASSPGRISIVSEYGNQYYYNLN

Specific function: Unknown

COG id: COG3353

COG function: function code N; Putative archaeal flagellar protein F

Gene ontology:

Cell location: Archaeal flagellum (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii flaF [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14037; Mature: 14037

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTTVLICSIYMYSTVDLTSAKVNDAYNTHSEYLKNKLDEKITVVSVEHSSENMNITLL
CHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCEEEEE
NEGQLTHELDNWDVLYNGTPVNFTITSGELYLAPLESVNISVNASSPGRISIVSEYGNQY
ECCCEEEECCCCEEEECCCCEEEEEECCEEEEEECCEEEEEEECCCCCEEEEEEECCCEE
YYNLN
EEEEC
>Mature Secondary Structure
MLLTTVLICSIYMYSTVDLTSAKVNDAYNTHSEYLKNKLDEKITVVSVEHSSENMNITLL
CHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCEEEEE
NEGQLTHELDNWDVLYNGTPVNFTITSGELYLAPLESVNISVNASSPGRISIVSEYGNQY
ECCCEEEECCCCEEEECCCCEEEEEECCEEEEEECCEEEEEEECCCCCEEEEEEECCCEE
YYNLN
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA