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The map label for this gene is pdaD [H]

Identifier: 45359145

GI number: 45359145

Start: 1532982

End: 1533476

Strand: Direct

Name: pdaD [H]

Synonym: MMP1582

Alternate gene names: 45359145

Gene position: 1532982-1533476 (Clockwise)

Preceding gene: 45359144

Following gene: 45359146

Centisome position: 92.29

GC content: 40.61

Gene sequence:

>495_bases
ATGATTAAATCAAGTGCAATACACTCCCCATTCGAAGCTCCAAACACGATTTCCCTTGTTGCAGGAACTGGTGATGCAAA
CAACCCGTTAAATGCTTTCGACATGTCGTTGTTAAAATCTGGTATCGGAAACTTAAACCTGATCAGAATTAGCAGCATCA
TGCCTCCAAAAGCAGACATTATTCCGCTCCCAAAAATACCGCAAGGTTCACTTGTTCCTACCGCATACGGTTACCAAATA
AGCGAAATAAAAGGCGAAACCGTTGCAGCAGGTATCAGCGTTGCAATTCCAAAAGATAAAGAATTATGTGGACTTATCAT
GGAATACGAATGCATTGGCGGTAAAAAAGAATGTGAAGATACCGTTAGAAATATGGCTAAAGAAGGTTTCGAAATGAGAG
GTTGGGAAATTGACGAAATAATCTCAATCGCTTCAGAACACACTGTTGAAAATATCGGATGCGCATTTGCAGCTGCAGCA
CTCTGGTACAAATAA

Upstream 100 bases:

>100_bases
TATATGATAATCTTTTATTTAGTTTGATAATTATTATTCTCTATTTTGCATAGCTATTTAAAACTCAAAAATTTAAAAAA
TACGAGAGGTGTCTAGTCTT

Downstream 100 bases:

>100_bases
AATATATAGTTGTAATTTAGAACTATAATAAAAGTTCACATATGTGGGATATTGAAACCATGATTTTAAAAAGAACTGTC
CAAAAAAGCATAAATCTCAA

Product: pyruvoyl-dependent arginine decarboxylase

Products: NA

Alternate protein names: PvlArgDC [H]

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MIKSSAIHSPFEAPNTISLVAGTGDANNPLNAFDMSLLKSGIGNLNLIRISSIMPPKADIIPLPKIPQGSLVPTAYGYQI
SEIKGETVAAGISVAIPKDKELCGLIMEYECIGGKKECEDTVRNMAKEGFEMRGWEIDEIISIASEHTVENIGCAFAAAA
LWYK

Sequences:

>Translated_164_residues
MIKSSAIHSPFEAPNTISLVAGTGDANNPLNAFDMSLLKSGIGNLNLIRISSIMPPKADIIPLPKIPQGSLVPTAYGYQI
SEIKGETVAAGISVAIPKDKELCGLIMEYECIGGKKECEDTVRNMAKEGFEMRGWEIDEIISIASEHTVENIGCAFAAAA
LWYK
>Mature_164_residues
MIKSSAIHSPFEAPNTISLVAGTGDANNPLNAFDMSLLKSGIGNLNLIRISSIMPPKADIIPLPKIPQGSLVPTAYGYQI
SEIKGETVAAGISVAIPKDKELCGLIMEYECIGGKKECEDTVRNMAKEGFEMRGWEIDEIISIASEHTVENIGCAFAAAA
LWYK

Specific function: Unknown

COG id: COG1945

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pdaD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016104
- InterPro:   IPR016105
- InterPro:   IPR002724
- ProDom:   PD010449 [H]

Pfam domain/function: PF01862 PvlArgDC [H]

EC number: =4.1.1.19 [H]

Molecular weight: Translated: 17585; Mature: 17585

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSSAIHSPFEAPNTISLVAGTGDANNPLNAFDMSLLKSGIGNLNLIRISSIMPPKADI
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCE
IPLPKIPQGSLVPTAYGYQISEIKGETVAAGISVAIPKDKELCGLIMEYECIGGKKECED
ECCCCCCCCCCCCCCCCEEEECCCCCEEECCEEEECCCCHHHHHHHHHHHHCCCHHHHHH
TVRNMAKEGFEMRGWEIDEIISIASEHTVENIGCAFAAAALWYK
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKSSAIHSPFEAPNTISLVAGTGDANNPLNAFDMSLLKSGIGNLNLIRISSIMPPKADI
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCE
IPLPKIPQGSLVPTAYGYQISEIKGETVAAGISVAIPKDKELCGLIMEYECIGGKKECED
ECCCCCCCCCCCCCCCCEEEECCCCCEEECCEEEECCCCHHHHHHHHHHHHCCCHHHHHH
TVRNMAKEGFEMRGWEIDEIISIASEHTVENIGCAFAAAALWYK
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA