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The map label for this gene is 45358793

Identifier: 45358793

GI number: 45358793

Start: 1218373

End: 1219431

Strand: Direct

Name: 45358793

Synonym: MMP1230

Alternate gene names: NA

Gene position: 1218373-1219431 (Clockwise)

Preceding gene: 45358792

Following gene: 45358794

Centisome position: 73.35

GC content: 30.97

Gene sequence:

>1059_bases
ATGGATACTCGTATCAGGGATTTTGTAAAAACTAATGAATGTTATTTTGCAGTAAATACTTATTATCATCCAGAAAATTC
AGTTATTTCTTTTTTAAGATACATAAATATCGATAAAATCGGAAATCATCTTTTAAAAGACTATGAACTTGATGAAAACG
ACATAAGAATACTTAATGGGGAAAGATTCATAAAAGTGGCAGATAGTAGCAAGGCTTACGCAATTTTAAAAGAATACTAC
CCGGAATATTTATTTTATGATGAAATAAACGACGTACTTTTGCATGCCGTTCCTAAAACTAACATTAAAGAAATTTTAAG
CCCCCAAAAAAGATTGGAAGAAGTTTTAAATGAGCAGAATACTGAAGCTGAAATAAAATGTGCGAAATTAGCAGATACGC
TTCATGATTACGGACTTGAATACAAAAATATGGGGGTTTCTGGATCCACTGTTTTAAAACTAAACAATGAAAATTCAGAC
ATTGATTTTGTAATCTATGGAATGGAAAAACACAAAATTGCAAGAGAAATTCTATCCGTTACTTTTAAAGATGGCGTTTT
AGAACCACTTTCTGAAGATTTCTGGAAAAAAGCGTATGTAAAAAGAATAAAAGATGGAACATTAACTTACGATGAGTTTG
TTTGGCATGAAAAGAGAAAATTGAACAGGGGCGTTGTTGATGGCGTAATGTTTGATTTACTTGCAACAAGAGAATGGGAT
GAAATAACTGAAAACTATGGGGATAAAAAATACAAAAATTTAGGATTTATCCAGATTAAAGCAAAAGTTAAAGACGATAC
CTTTGTTTTTGATAATCCTGCCGTTTACAAAGTTGAAAATGTCGAAATTTTAAACAATGAAAATAATGCAGAAGTTTTAG
CATCTGAAATTGAAGAAGTGGTATCATTTACTCACACTTATGCTGGATCCACATATAATGGCGAAGAAATTATTGTTCGC
GGAAAATTAGAAGAAGTTTCGGGAAAAGAAACTTACAAACGAGTTGTTGTTGGAACCACTCGAGAAGCATTTAATGAATA
CGTAAAATTAGCTAAATAA

Upstream 100 bases:

>100_bases
GGCCGCAGTTGGGTTAAAACAGGGATAATTTAAATTGAATTATATGTACCATAAAATATATGATAAACCCATATTCTTTT
AATTTTTAAGAAGTGAAATT

Downstream 100 bases:

>100_bases
TTAATTTTCTTCTTTTTAGGGTGGTAGTATTATTGATATTCCAAATTACGGAAAAATAACTTCTAAAACAGTTGTGTTTG
ATTTAAACGGGACTTTGGCA

Product: DNA polymerase, beta-like region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MDTRIRDFVKTNECYFAVNTYYHPENSVISFLRYINIDKIGNHLLKDYELDENDIRILNGERFIKVADSSKAYAILKEYY
PEYLFYDEINDVLLHAVPKTNIKEILSPQKRLEEVLNEQNTEAEIKCAKLADTLHDYGLEYKNMGVSGSTVLKLNNENSD
IDFVIYGMEKHKIAREILSVTFKDGVLEPLSEDFWKKAYVKRIKDGTLTYDEFVWHEKRKLNRGVVDGVMFDLLATREWD
EITENYGDKKYKNLGFIQIKAKVKDDTFVFDNPAVYKVENVEILNNENNAEVLASEIEEVVSFTHTYAGSTYNGEEIIVR
GKLEEVSGKETYKRVVVGTTREAFNEYVKLAK

Sequences:

>Translated_352_residues
MDTRIRDFVKTNECYFAVNTYYHPENSVISFLRYINIDKIGNHLLKDYELDENDIRILNGERFIKVADSSKAYAILKEYY
PEYLFYDEINDVLLHAVPKTNIKEILSPQKRLEEVLNEQNTEAEIKCAKLADTLHDYGLEYKNMGVSGSTVLKLNNENSD
IDFVIYGMEKHKIAREILSVTFKDGVLEPLSEDFWKKAYVKRIKDGTLTYDEFVWHEKRKLNRGVVDGVMFDLLATREWD
EITENYGDKKYKNLGFIQIKAKVKDDTFVFDNPAVYKVENVEILNNENNAEVLASEIEEVVSFTHTYAGSTYNGEEIIVR
GKLEEVSGKETYKRVVVGTTREAFNEYVKLAK
>Mature_352_residues
MDTRIRDFVKTNECYFAVNTYYHPENSVISFLRYINIDKIGNHLLKDYELDENDIRILNGERFIKVADSSKAYAILKEYY
PEYLFYDEINDVLLHAVPKTNIKEILSPQKRLEEVLNEQNTEAEIKCAKLADTLHDYGLEYKNMGVSGSTVLKLNNENSD
IDFVIYGMEKHKIAREILSVTFKDGVLEPLSEDFWKKAYVKRIKDGTLTYDEFVWHEKRKLNRGVVDGVMFDLLATREWD
EITENYGDKKYKNLGFIQIKAKVKDDTFVFDNPAVYKVENVEILNNENNAEVLASEIEEVVSFTHTYAGSTYNGEEIIVR
GKLEEVSGKETYKRVVVGTTREAFNEYVKLAK

Specific function: Unknown

COG id: COG1665

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002934 [H]

Pfam domain/function: PF01909 NTP_transf_2 [H]

EC number: NA

Molecular weight: Translated: 40915; Mature: 40915

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTRIRDFVKTNECYFAVNTYYHPENSVISFLRYINIDKIGNHLLKDYELDENDIRILNG
CCCHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCEEEECC
ERFIKVADSSKAYAILKEYYPEYLFYDEINDVLLHAVPKTNIKEILSPQKRLEEVLNEQN
CEEEEEECCCCHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHCCCC
TEAEIKCAKLADTLHDYGLEYKNMGVSGSTVLKLNNENSDIDFVIYGMEKHKIAREILSV
CCHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHH
TFKDGVLEPLSEDFWKKAYVKRIKDGTLTYDEFVWHEKRKLNRGVVDGVMFDLLATREWD
HHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHH
EITENYGDKKYKNLGFIQIKAKVKDDTFVFDNPAVYKVENVEILNNENNAEVLASEIEEV
HHHHHCCCHHHCCCCEEEEEEEECCCEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHH
VSFTHTYAGSTYNGEEIIVRGKLEEVSGKETYKRVVVGTTREAFNEYVKLAK
HHHHHHHCCCCCCCCEEEEECCHHHCCCHHHHHHHEEECCHHHHHHHHHCCC
>Mature Secondary Structure
MDTRIRDFVKTNECYFAVNTYYHPENSVISFLRYINIDKIGNHLLKDYELDENDIRILNG
CCCHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCEEEECC
ERFIKVADSSKAYAILKEYYPEYLFYDEINDVLLHAVPKTNIKEILSPQKRLEEVLNEQN
CEEEEEECCCCHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHCCCC
TEAEIKCAKLADTLHDYGLEYKNMGVSGSTVLKLNNENSDIDFVIYGMEKHKIAREILSV
CCHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHH
TFKDGVLEPLSEDFWKKAYVKRIKDGTLTYDEFVWHEKRKLNRGVVDGVMFDLLATREWD
HHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHH
EITENYGDKKYKNLGFIQIKAKVKDDTFVFDNPAVYKVENVEILNNENNAEVLASEIEEV
HHHHHCCCHHHCCCCEEEEEEEECCCEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHH
VSFTHTYAGSTYNGEEIIVRGKLEEVSGKETYKRVVVGTTREAFNEYVKLAK
HHHHHHHCCCCCCCCEEEEECCHHHCCCHHHHHHHEEECCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]